Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1119 |
| Cow position: | chr10:51730858-51730575 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 827-1124 |
| Cow position: | chr10:1336765-1336465 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 103 |
| Conread position: | 828-1006 |
| Cow position: | chr10:56587887-56588067 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 837-1035 |
| Cow position: | chr10:8056227-8056029 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 837-1122 |
| Cow position: | chr10:16781241-16781531 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 128 |
| Conread position: | 837-1123 |
| Cow position: | chr10:18522047-18522330 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 846-1126 |
| Cow position: | chr10:38116113-38116392 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 848-1123 |
| Cow position: | chr10:24081721-24082016 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 249 |
| Conread position: | 849-1007 |
| Cow position: | chr10:1101605-1101444 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 849-1031 |
| Cow position: | chr10:37929564-37929748 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 849-1122 |
| Cow position: | chr10:65166158-65165890 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 852-1123 |
| Cow position: | chr10:20867359-20867628 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 855-1127 |
| Cow position: | chr10:42553403-42553690 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 878-1073 |
| Cow position: | chr10:22699019-22698819 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 878-1124 |
| Cow position: | chr10:54313986-54314235 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 881-1003 |
| Cow position: | chr10:4713397-4713274 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 881-1128 |
| Cow position: | chr10:61469319-61469078 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 198, 53 |
| Conread position: | 886-1077 |
| Cow position: | chr10:63542851-63543031 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 886-1096 |
| Cow position: | chr10:28840263-28840042 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 890-1123 |
| Cow position: | chr10:7862602-7862372 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 74, 141 |
| Conread position: | 893-1124 |
| Cow position: | chr10:4933583-4933367 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 213, 61 |
| Conread position: | 934-1094 |
| Cow position: | chr10:66008371-66008529 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 934-1097 |
| Cow position: | chr10:13132315-13132149 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 934-1105 |
| Cow position: | chr10:60752403-60752570 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1106 |
| Cow position: | chr10:13113640-13113471 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 934-1124 |
| Cow position: | chr10:19592489-19592679 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 164, 69 |
| Conread position: | 934-1126 |
| Cow position: | chr10:56336813-56336625 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 934-1128 |
| Cow position: | chr10:44030230-44030031 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 934-1138 |
| Cow position: | chr10:2603556-2603764 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 935-1119 |
| Cow position: | chr10:8803988-8803801 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 935-1124 |
| Cow position: | chr10:53416613-53416430 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 938-1124 |
| Cow position: | chr10:65898667-65898479 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 947-1123 |
| Cow position: | chr10:19609786-19609612 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 155, 17 |
| Conread position: | 961-1076 |
| Cow position: | chr10:59644295-59644177 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 961-1124 |
| Cow position: | chr10:1701791-1701623 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 969-1123 |
| Cow position: | chr10:1475895-1475744 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 971-1134 |
| Cow position: | chr10:28322035-28321867 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 111 |
Show alignments to all cow chromosomes.