Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1123 |
| Cow position: | chr13:11303937-11304235 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 827-1124 |
| Cow position: | chr13:1917199-1916893 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 832-1118 |
| Cow position: | chr13:60204889-60204616 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 837-1006 |
| Cow position: | chr13:5126299-5126127 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 837-1038 |
| Cow position: | chr13:21288533-21288327 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 837-1080 |
| Cow position: | chr13:13074046-13073807 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 837-1161 |
| Cow position: | chr13:36338969-36339291 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 242, 124 |
| Conread position: | 839-1023 |
| Cow position: | chr13:11241448-11241262 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 848-1106 |
| Cow position: | chr13:632744-632490 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 849-1042 |
| Cow position: | chr13:52999789-52999976 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 173, 64 |
| Conread position: | 850-1122 |
| Cow position: | chr13:12853935-12854211 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 876-1054 |
| Cow position: | chr13:11111767-11111945 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 137 |
| Conread position: | 881-1044 |
| Cow position: | chr13:9946165-9946328 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 77 |
| Conread position: | 881-1124 |
| Cow position: | chr13:3938170-3937927 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 881-1124 |
| Cow position: | chr13:50548624-50548866 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 883-1137 |
| Cow position: | chr13:6878893-6878646 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 886-1104 |
| Cow position: | chr13:9226588-9226374 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 193, 82 |
| Conread position: | 917-1106 |
| Cow position: | chr13:60471718-60471908 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 934-1073 |
| Cow position: | chr13:15004584-15004722 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 948-1122 |
| Cow position: | chr13:12449540-12449715 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 22 |
Show alignments to all cow chromosomes.