Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1060 |
| Cow position: | chr15:27871774-27871542 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 106, 174 |
| Conread position: | 837-1047 |
| Cow position: | chr15:22458170-22458375 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 837-1127 |
| Cow position: | chr15:23535456-23535750 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 171 |
| Conread position: | 848-1124 |
| Cow position: | chr15:16470338-16470049 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 849-1058 |
| Cow position: | chr15:45159259-45159464 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 885-1104 |
| Cow position: | chr15:48444177-48444396 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 886-1099 |
| Cow position: | chr15:21630045-21630252 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 102 |
| Conread position: | 934-1096 |
| Cow position: | chr15:29532485-29532322 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 934-1104 |
| Cow position: | chr15:24571467-24571293 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 934-1117 |
| Cow position: | chr15:37798288-37798472 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 934-1123 |
| Cow position: | chr15:16292848-16292658 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 934-1124 |
| Cow position: | chr15:43748531-43748724 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 38, 145 |
| Conread position: | 936-1124 |
| Cow position: | chr15:24920241-24920428 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 948-1124 |
| Cow position: | chr15:26868587-26868404 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 951-1124 |
| Cow position: | chr15:19213750-19213925 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 128 |
| Conread position: | 952-1124 |
| Cow position: | chr15:23930828-23930654 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 127 |
Show alignments to all cow chromosomes.