Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1123 |
| Cow position: | chr16:49997177-49996901 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 275, 7 |
| Conread position: | 833-1078 |
| Cow position: | chr16:51232142-51232389 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 835-1073 |
| Cow position: | chr16:5703269-5703508 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 835-1088 |
| Cow position: | chr16:9359265-9359512 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 839-1113 |
| Cow position: | chr16:52484449-52484172 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 849-1077 |
| Cow position: | chr16:27332222-27332450 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 112 |
| Conread position: | 852-1119 |
| Cow position: | chr16:30547534-30547267 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 862-1069 |
| Cow position: | chr16:15003254-15003459 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 150 |
| Conread position: | 879-1080 |
| Cow position: | chr16:13356232-13356035 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 112 |
| Conread position: | 881-1123 |
| Cow position: | chr16:20861597-20861356 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 882-1124 |
| Cow position: | chr16:40137792-40137559 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 889-1108 |
| Cow position: | chr16:6047397-6047617 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 911-1105 |
| Cow position: | chr16:54608349-54608149 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 934-1076 |
| Cow position: | chr16:11785145-11785002 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1104 |
| Cow position: | chr16:53518565-53518397 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 934-1124 |
| Cow position: | chr16:53982830-53983021 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 934-1131 |
| Cow position: | chr16:54724920-54725120 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 950-1124 |
| Cow position: | chr16:14923407-14923583 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 963-1118 |
| Cow position: | chr16:49400588-49400430 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 977-1124 |
| Cow position: | chr16:22722312-22722462 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 987-1123 |
| Cow position: | chr16:51271468-51271332 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 88 |
Show alignments to all cow chromosomes.