Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 825-1115 |
| Cow position: | chr17:12779873-12779584 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 195 |
| Conread position: | 827-1000 |
| Cow position: | chr17:19013560-19013388 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 136, 47 |
| Conread position: | 827-1116 |
| Cow position: | chr17:25624583-25624872 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 827-1116 |
| Cow position: | chr17:43050456-43050169 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 837-1016 |
| Cow position: | chr17:5258996-5258809 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 837-1073 |
| Cow position: | chr17:35245222-35244982 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 848-1124 |
| Cow position: | chr17:8237952-8237667 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 849-1124 |
| Cow position: | chr17:24907254-24906988 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 853-1124 |
| Cow position: | chr17:7685103-7684842 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 879-1077 |
| Cow position: | chr17:20281262-20281462 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 881-1113 |
| Cow position: | chr17:13131037-13131270 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 881-1124 |
| Cow position: | chr17:17379535-17379781 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 886-1124 |
| Cow position: | chr17:29256790-29257036 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 896-1123 |
| Cow position: | chr17:1760499-1760273 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 68 |
| Conread position: | 898-1115 |
| Cow position: | chr17:12753476-12753257 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 931-1124 |
| Cow position: | chr17:8708284-8708478 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 933-1124 |
| Cow position: | chr17:12434033-12434223 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 934-1124 |
| Cow position: | chr17:37440413-37440605 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 946-1123 |
| Cow position: | chr17:39851469-39851285 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 949-1126 |
| Cow position: | chr17:8505309-8505490 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 952-1145 |
| Cow position: | chr17:28228378-28228186 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 962-1129 |
| Cow position: | chr17:5763835-5764006 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 125 |
| Conread position: | 981-1126 |
| Cow position: | chr17:6595502-6595356 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 126, 102 |
Show alignments to all cow chromosomes.