Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 790-1128 |
| Cow position: | chr18:27418802-27419144 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 834-1060 |
| Cow position: | chr18:4328525-4328755 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 837-1021 |
| Cow position: | chr18:16440211-16440396 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 837-1077 |
| Cow position: | chr18:39561372-39561127 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 838-1006 |
| Cow position: | chr18:28815037-28814862 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 838-1077 |
| Cow position: | chr18:1060604-1060369 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 849-1077 |
| Cow position: | chr18:4652241-4652474 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 850-997 |
| Cow position: | chr18:33857605-33857756 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 123 |
| Conread position: | 850-1077 |
| Cow position: | chr18:14430933-14431166 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 850-1078 |
| Cow position: | chr18:56124242-56124473 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 881-1043 |
| Cow position: | chr18:52055367-52055533 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 881-1116 |
| Cow position: | chr18:42059027-42058792 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 131, 80 |
| Conread position: | 898-1104 |
| Cow position: | chr18:50441446-50441241 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 934-1118 |
| Cow position: | chr18:37884461-37884278 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 934-1121 |
| Cow position: | chr18:15689651-15689461 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 934-1124 |
| Cow position: | chr18:53280435-53280239 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1149 |
| Cow position: | chr18:21766670-21766886 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 941-1077 |
| Cow position: | chr18:48486534-48486669 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 946-1124 |
| Cow position: | chr18:20592445-20592625 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 949-1123 |
| Cow position: | chr18:51308110-51307933 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 960-1094 |
| Cow position: | chr18:37717553-37717689 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 105 |
Show alignments to all cow chromosomes.