Cow genome map


           Conread name:
           Ss1.1-ruio18_f3.5.5
        

               Conread position:
               827-1120
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               827-1134
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 140
               

               Conread position:
               831-1105
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               835-1138
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               837-1124
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               846-1027
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               846-1124
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               849-1045
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               850-1120
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               851-1060
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               852-1118
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               878-1124
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               86, 122
               

               Conread position:
               879-1123
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               879-1136
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               94, 85
               

               Conread position:
               881-1073
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               881-1123
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               881-1124
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               881-1143
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               885-1034
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               889-1154
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               134, 77
               

               Conread position:
               934-1122
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               934-1126
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               935-1119
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               936-1106
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               936-1124
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               936-1149
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               941-1127
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               947-1123
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               949-1124
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 120
               

               Conread position:
               952-1124
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               969-1121
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               983-1127
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 60
               
Show alignments to all cow chromosomes.