Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1120 |
| Cow position: | chr2:58502856-58503143 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 827-1134 |
| Cow position: | chr2:56374916-56375234 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 831-1105 |
| Cow position: | chr2:69379523-69379249 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 835-1138 |
| Cow position: | chr2:1237153-1236854 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 837-1124 |
| Cow position: | chr2:21663841-21664127 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 846-1027 |
| Cow position: | chr2:76825913-76825732 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 126, 35 |
| Conread position: | 846-1124 |
| Cow position: | chr2:77860732-77861026 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 849-1045 |
| Cow position: | chr2:52085816-52086004 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 850-1120 |
| Cow position: | chr2:85259506-85259784 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 851-1060 |
| Cow position: | chr2:10796181-10796390 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 852-1118 |
| Cow position: | chr2:14469746-14470018 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 878-1124 |
| Cow position: | chr2:44068317-44068569 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 86, 122 |
| Conread position: | 879-1123 |
| Cow position: | chr2:29511158-29510925 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 879-1136 |
| Cow position: | chr2:15145555-15145814 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 85 |
| Conread position: | 881-1073 |
| Cow position: | chr2:38671807-38671999 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 881-1123 |
| Cow position: | chr2:14431955-14431695 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 881-1124 |
| Cow position: | chr2:53441559-53441809 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 881-1143 |
| Cow position: | chr2:73768962-73769226 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 885-1034 |
| Cow position: | chr2:33020225-33020075 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 889-1154 |
| Cow position: | chr2:61907789-61908066 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 934-1122 |
| Cow position: | chr2:74381714-74381912 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 934-1126 |
| Cow position: | chr2:84274793-84274997 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 935-1119 |
| Cow position: | chr2:28466910-28467097 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 936-1106 |
| Cow position: | chr2:19522050-19522222 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 936-1124 |
| Cow position: | chr2:46776790-46776604 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 936-1149 |
| Cow position: | chr2:15645342-15645132 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 941-1127 |
| Cow position: | chr2:38152174-38151985 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 947-1123 |
| Cow position: | chr2:3316619-3316446 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 949-1124 |
| Cow position: | chr2:25075645-25075819 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 952-1124 |
| Cow position: | chr2:38154382-38154558 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 969-1121 |
| Cow position: | chr2:51462589-51462427 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 983-1127 |
| Cow position: | chr2:76847562-76847706 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 121, 60 |
Show alignments to all cow chromosomes.