Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1124 |
| Cow position: | chr20:6819617-6819922 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 829-1090 |
| Cow position: | chr20:25538611-25538880 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 242 |
| Conread position: | 837-1124 |
| Cow position: | chr20:9174679-9174965 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 837-1128 |
| Cow position: | chr20:5917559-5917851 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 837-1140 |
| Cow position: | chr20:14214754-14215060 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 92 |
| Conread position: | 843-1126 |
| Cow position: | chr20:1894675-1894399 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 849-1102 |
| Cow position: | chr20:6337824-6337566 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 849-1104 |
| Cow position: | chr20:32371716-32371460 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 874-1073 |
| Cow position: | chr20:38126780-38126581 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 881-1028 |
| Cow position: | chr20:36329362-36329214 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 882-1104 |
| Cow position: | chr20:18120135-18120348 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 884-1118 |
| Cow position: | chr20:28487115-28486881 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 80, 52 |
| Conread position: | 884-1119 |
| Cow position: | chr20:11908646-11908416 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 934-1106 |
| Cow position: | chr20:3005093-3004921 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 934-1107 |
| Cow position: | chr20:1514492-1514318 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 934-1132 |
| Cow position: | chr20:1236890-1237091 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 152 |
| Conread position: | 934-1156 |
| Cow position: | chr20:12579826-12580053 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 935-1126 |
| Cow position: | chr20:26252007-26252202 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 950-1130 |
| Cow position: | chr20:12071066-12071243 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 970-1105 |
| Cow position: | chr20:11015922-11016056 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 970-1131 |
| Cow position: | chr20:16837804-16837966 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 136, 120 |
| Conread position: | 971-1124 |
| Cow position: | chr20:9298541-9298697 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 46 |
Show alignments to all cow chromosomes.