Cow genome map


           Conread name:
           Ss1.1-ruio18_f3.5.5
        

               Conread position:
               798-1077
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               827-1093
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               827-1115
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               828-962
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               832-1135
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 131
               

               Conread position:
               837-1077
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               837-1106
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               39, 45
               

               Conread position:
               837-1126
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 217
               

               Conread position:
               846-1127
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               850-1098
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               881-1010
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               881-1043
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               881-1112
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               217, 66
               

               Conread position:
               883-1039
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               934-1124
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               934-1124
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               935-1126
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               935-1133
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               946-1124
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               947-1123
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               947-1124
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               981-1158
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 89
               

               Conread position:
               1648-1798
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 35
               
Show alignments to all cow chromosomes.