Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 799-971 |
| Cow position: | chr24:33099573-33099744 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 825-1035 |
| Cow position: | chr24:12483442-12483226 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 7, 89 |
| Conread position: | 829-1104 |
| Cow position: | chr24:24698244-24697959 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 837-993 |
| Cow position: | chr24:23641844-23642002 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 837-1010 |
| Cow position: | chr24:44139009-44138832 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 837-1101 |
| Cow position: | chr24:30816039-30815769 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 837-1104 |
| Cow position: | chr24:28981449-28981716 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 837-1131 |
| Cow position: | chr24:32951347-32951050 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 840-1077 |
| Cow position: | chr24:33964545-33964782 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 848-1050 |
| Cow position: | chr24:39030026-39029823 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 850-1024 |
| Cow position: | chr24:35002498-35002323 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 854-1101 |
| Cow position: | chr24:42684614-42684861 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 109, 163 |
| Conread position: | 881-1079 |
| Cow position: | chr24:45077401-45077213 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 881-1117 |
| Cow position: | chr24:29790413-29790650 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 933-1129 |
| Cow position: | chr24:28773673-28773867 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 934-1104 |
| Cow position: | chr24:36527738-36527555 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1145 |
| Cow position: | chr24:43914575-43914360 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 113, 23 |
Show alignments to all cow chromosomes.