Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 798-1104 |
| Cow position: | chr27:9316884-9317191 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 827-1111 |
| Cow position: | chr27:17414064-17413782 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 838-1122 |
| Cow position: | chr27:15418397-15418679 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 76 |
| Conread position: | 845-1129 |
| Cow position: | chr27:18629146-18629442 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 848-1047 |
| Cow position: | chr27:7403228-7403432 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 849-1124 |
| Cow position: | chr27:27280649-27280376 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 850-1086 |
| Cow position: | chr27:9414598-9414365 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 37, 186 |
| Conread position: | 850-1115 |
| Cow position: | chr27:18044940-18045205 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 881-1043 |
| Cow position: | chr27:19793107-19792942 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 881-1095 |
| Cow position: | chr27:2129580-2129365 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 83, 187 |
| Conread position: | 881-1105 |
| Cow position: | chr27:15834827-15834598 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 882-1124 |
| Cow position: | chr27:26595247-26594998 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 883-1124 |
| Cow position: | chr27:9467038-9467290 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 889-1106 |
| Cow position: | chr27:20804662-20804446 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 108 |
| Conread position: | 898-1098 |
| Cow position: | chr27:21160652-21160850 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 933-1098 |
| Cow position: | chr27:29390227-29390064 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 934-1060 |
| Cow position: | chr27:21258861-21258733 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 950-1124 |
| Cow position: | chr27:7207867-7207689 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 969-1124 |
| Cow position: | chr27:1285715-1285870 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 970-1121 |
| Cow position: | chr27:7533769-7533618 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 971-1126 |
| Cow position: | chr27:1090400-1090559 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 971-1127 |
| Cow position: | chr27:4574680-4574837 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 131, 0 |
Show alignments to all cow chromosomes.