Cow genome map


           Conread name:
           Ss1.1-ruio18_f3.5.5
        

               Conread position:
               827-962
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               827-1108
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               61, 102
               

               Conread position:
               837-1077
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               837-1098
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               837-1124
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 283
               

               Conread position:
               840-1077
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               846-1077
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               848-1060
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               851-1121
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               852-1077
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               855-1077
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               16, 110
               

               Conread position:
               878-1123
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               879-1119
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               880-1119
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 45
               

               Conread position:
               881-1060
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               83, 164
               

               Conread position:
               881-1119
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 132
               

               Conread position:
               881-1126
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               884-1076
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 90
               

               Conread position:
               934-1117
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               168, 30
               

               Conread position:
               934-1118
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               934-1124
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               934-1124
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               934-1126
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 115
               

               Conread position:
               935-1076
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               935-1124
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               935-1124
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               935-1127
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 23
               

               Conread position:
               938-1104
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               950-1126
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               951-1122
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 59
               
Show alignments to all cow chromosomes.