Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 783-1080 |
| Cow position: | chr6:52549155-52549452 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 97, 179 |
| Conread position: | 827-1119 |
| Cow position: | chr6:32072902-32072613 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 279, 137 |
| Conread position: | 827-1139 |
| Cow position: | chr6:8305252-8305564 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 138 |
| Conread position: | 828-1122 |
| Cow position: | chr6:1782133-1781842 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 142, 30 |
| Conread position: | 835-1076 |
| Cow position: | chr6:67612192-67611951 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 837-1124 |
| Cow position: | chr6:7281552-7281836 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 232, 14 |
| Conread position: | 837-1124 |
| Cow position: | chr6:35073731-35073447 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 46, 130 |
| Conread position: | 845-1074 |
| Cow position: | chr6:23353186-23352956 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 185 |
| Conread position: | 849-1124 |
| Cow position: | chr6:33527535-33527813 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 851-1076 |
| Cow position: | chr6:29778867-29779095 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 881-1120 |
| Cow position: | chr6:7590226-7589981 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 206 |
| Conread position: | 881-1129 |
| Cow position: | chr6:59452931-59452690 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 221, 38 |
| Conread position: | 885-1135 |
| Cow position: | chr6:4371291-4371043 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 886-1053 |
| Cow position: | chr6:19438254-19438422 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 888-1023 |
| Cow position: | chr6:12151274-12151410 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 934-1071 |
| Cow position: | chr6:43598682-43598541 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1104 |
| Cow position: | chr6:49629482-49629647 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 934-1123 |
| Cow position: | chr6:4494176-4494370 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 934-1124 |
| Cow position: | chr6:59655228-59655420 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 969-1091 |
| Cow position: | chr6:15693574-15693696 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 969-1124 |
| Cow position: | chr6:48007840-48007693 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 970-1124 |
| Cow position: | chr6:29723094-29723247 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 108 |
| Conread position: | 970-1124 |
| Cow position: | chr6:53199905-53200060 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 130, 108 |
| Conread position: | 971-1124 |
| Cow position: | chr6:29773941-29774095 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 91 |
| Conread position: | 981-1110 |
| Cow position: | chr6:45272524-45272394 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 982-1101 |
| Cow position: | chr6:6659664-6659784 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.