Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1124 |
| Cow position: | chr7:1015518-1015823 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 837-1119 |
| Cow position: | chr7:45197004-45196720 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 837-1123 |
| Cow position: | chr7:35762391-35762103 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 74, 162 |
| Conread position: | 837-1124 |
| Cow position: | chr7:2393860-2393569 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 837-1124 |
| Cow position: | chr7:55684992-55685281 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 840-1123 |
| Cow position: | chr7:26168399-26168106 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 248 |
| Conread position: | 849-1124 |
| Cow position: | chr7:24109878-24109600 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 243 |
| Conread position: | 850-1008 |
| Cow position: | chr7:44140601-44140767 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 866-1059 |
| Cow position: | chr7:44293978-44293787 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 881-1072 |
| Cow position: | chr7:30401473-30401286 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 882-1076 |
| Cow position: | chr7:49716461-49716654 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 883-1077 |
| Cow position: | chr7:1796627-1796823 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 884-1126 |
| Cow position: | chr7:718768-719014 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 934-1098 |
| Cow position: | chr7:43944270-43944435 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1114 |
| Cow position: | chr7:45227688-45227878 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 934-1158 |
| Cow position: | chr7:33381019-33380798 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 936-1118 |
| Cow position: | chr7:24536870-24537052 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 947-1094 |
| Cow position: | chr7:48230540-48230684 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 969-1123 |
| Cow position: | chr7:1257297-1257143 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 133, 41 |
Show alignments to all cow chromosomes.