Cow genome map
| Conread name: | Ss1.1-ruio18_f3.5.5 |
| Conread position: | 827-1061 |
| Cow position: | chr8:32797138-32797369 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 827-1124 |
| Cow position: | chr8:15630495-15630196 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 254 |
| Conread position: | 831-1124 |
| Cow position: | chr8:34920943-34920653 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 50, 174 |
| Conread position: | 833-1115 |
| Cow position: | chr8:15509780-15510080 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 45, 208 |
| Conread position: | 837-1008 |
| Cow position: | chr8:56638129-56638303 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 837-1061 |
| Cow position: | chr8:43774192-43774417 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 838-1123 |
| Cow position: | chr8:38008322-38008605 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 105 |
| Conread position: | 846-1027 |
| Cow position: | chr8:38194967-38195154 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 846-1046 |
| Cow position: | chr8:3991681-3991874 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 846-1060 |
| Cow position: | chr8:28334294-28334508 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 126 |
| Conread position: | 846-1073 |
| Cow position: | chr8:59574846-59574626 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 846-1090 |
| Cow position: | chr8:61527226-61527463 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 846-1123 |
| Cow position: | chr8:13904285-13903986 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 258 |
| Conread position: | 881-1031 |
| Cow position: | chr8:6400246-6400095 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 882-1123 |
| Cow position: | chr8:13924428-13924191 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 180, 77 |
| Conread position: | 934-1093 |
| Cow position: | chr8:26096269-26096114 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 934-1104 |
| Cow position: | chr8:56599367-56599540 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 934-1113 |
| Cow position: | chr8:19768806-19768986 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 934-1124 |
| Cow position: | chr8:33347892-33347700 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 934-1126 |
| Cow position: | chr8:44836137-44836324 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 934-1127 |
| Cow position: | chr8:59087417-59087229 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 171, 30 |
| Conread position: | 934-1132 |
| Cow position: | chr8:26579467-26579669 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 934-1139 |
| Cow position: | chr8:22651428-22651638 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 36 |
| Conread position: | 935-1136 |
| Cow position: | chr8:18959058-18958855 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 938-1094 |
| Cow position: | chr8:13250371-13250219 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 938-1124 |
| Cow position: | chr8:6034710-6034521 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 947-1124 |
| Cow position: | chr8:31899650-31899471 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 137 |
| Conread position: | 950-1086 |
| Cow position: | chr8:19012459-19012321 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 968-1129 |
| Cow position: | chr8:10429328-10429490 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 139, 110 |
| Conread position: | 969-1124 |
| Cow position: | chr8:30314543-30314388 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 136, 93 |
Show alignments to all cow chromosomes.