Cow genome map
Conread name: | Ss1.1-ruio18_f3.5.5 |
Conread position: | 782-1124 |
Cow position: | chrX:2374729-2375059 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 246 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 17, 38 |
Conread position: | 801-997 |
Cow position: | chrX:1095582-1095778 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 18 |
Conread position: | 809-1123 |
Cow position: | chrX:4835354-4835672 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 229 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 20, 33 |
Conread position: | 827-1060 |
Cow position: | chrX:398480-398242 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 181 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 57, 147 |
Conread position: | 827-1104 |
Cow position: | chrX:23118420-23118698 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 199 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 63, 208 |
Conread position: | 827-1139 |
Cow position: | chrX:316309-315980 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 235 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 64, 320 |
Conread position: | 835-1124 |
Cow position: | chrX:27957921-27958211 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 53 |
Conread position: | 837-1000 |
Cow position: | chrX:27719523-27719358 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 43, 125 |
Conread position: | 837-1124 |
Cow position: | chrX:19066646-19066925 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 205 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 43, 12 |
Conread position: | 837-1124 |
Cow position: | chrX:23907909-23908197 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 104 |
Conread position: | 837-1127 |
Cow position: | chrX:38533242-38533536 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 213 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 43, 81 |
Conread position: | 838-1028 |
Cow position: | chrX:41408338-41408530 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 43, 135 |
Conread position: | 838-1099 |
Cow position: | chrX:30848372-30848111 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 192 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 125, 230 |
Conread position: | 838-1123 |
Cow position: | chrX:20948280-20948561 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 214 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 41, 60 |
Conread position: | 849-1124 |
Cow position: | chrX:3358842-3359127 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 205 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 38, 48 |
Conread position: | 850-1024 |
Cow position: | chrX:30766209-30766383 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 138 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 122, 64 |
Conread position: | 850-1119 |
Cow position: | chrX:6029454-6029187 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 24 |
Conread position: | 851-1101 |
Cow position: | chrX:25044167-25043919 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 38 |
Conread position: | 852-1085 |
Cow position: | chrX:17875899-17875669 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 66, 46 |
Conread position: | 852-1116 |
Cow position: | chrX:13918231-13918503 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 201 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 34, 222 |
Conread position: | 853-1060 |
Cow position: | chrX:13989390-13989190 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 160 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 120, 28 |
Conread position: | 879-1118 |
Cow position: | chrX:40111563-40111322 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 173 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 85, 34 |
Conread position: | 881-1047 |
Cow position: | chrX:15277579-15277409 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 134 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 90, 44 |
Conread position: | 883-1048 |
Cow position: | chrX:8502511-8502676 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 81, 13 |
Conread position: | 908-1126 |
Cow position: | chrX:7087499-7087724 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 157 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 934-1098 |
Cow position: | chrX:12717019-12716856 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 30, 134 |
Conread position: | 934-1124 |
Cow position: | chrX:16953538-16953348 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 144 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 155, 27 |
Conread position: | 934-1124 |
Cow position: | chrX:30728343-30728536 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 134 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 30, 145 |
Conread position: | 935-1088 |
Cow position: | chrX:22273809-22273659 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 935-1124 |
Cow position: | chrX:33787398-33787588 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 145 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 36, 22 |
Conread position: | 935-1126 |
Cow position: | chrX:42552536-42552355 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 139 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 171, 33 |
Conread position: | 969-1150 |
Cow position: | chrX:31732374-31732549 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 137, 74 |
Conread position: | 981-1104 |
Cow position: | chrX:3076996-3077117 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.