Cow genome map


           Conread name:
           Ss1.1-ruio22_o15.5
        

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               99, 85
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 96
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               362, 369
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 84
               

               Conread position:
               4-384
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               183, 12
               

               Conread position:
               9-335
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               12-339
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               12-380
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               164, 158
               

               Conread position:
               15-331
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               263, 251
               

               Conread position:
               15-380
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               15-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 159
               

               Conread position:
               15-384
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               95, 88
               

               Conread position:
               15-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               15-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               349, 354
               

               Conread position:
               16-240
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 210
               

               Conread position:
               16-335
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               16-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 158
               

               Conread position:
               16-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 158
               

               Conread position:
               16-384
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               79, 71
               

               Conread position:
               16-384
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 71
               

               Conread position:
               21-384
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-253
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               27-302
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               27-335
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-335
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-338
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               226, 217
               

               Conread position:
               27-338
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               228, 251
               

               Conread position:
               27-338
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               27-340
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               27-347
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               251, 68
               

               Conread position:
               27-380
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 147
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               326, 104
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 71
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               248, 228
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               167, 150
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 59
               

               Conread position:
               28-335
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 75
               

               Conread position:
               28-335
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               138, 134
               

               Conread position:
               28-335
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               145, 20
               

               Conread position:
               28-338
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 75
               

               Conread position:
               28-338
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               28-338
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               158, 165
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               28-366
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               28-383
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 59
               

               Conread position:
               28-383
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 73
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               202, 197
               

               Conread position:
               29-335
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               29-379
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               72, 67
               

               Conread position:
               29-384
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               29-384
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               29-384
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 67
               

               Conread position:
               30-207
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-339
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               31-340
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               148, 156
               

               Conread position:
               31-383
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               31-384
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               69, 56
               

               Conread position:
               31-384
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               129, 135
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 55
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               317, 328
               

               Conread position:
               37-339
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               95, 103
               

               Conread position:
               37-356
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               241, 228
               

               Conread position:
               42-383
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               308, 316
               

               Conread position:
               44-251
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-253
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               44-338
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-338
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               138, 149
               

               Conread position:
               44-339
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 43
               

               Conread position:
               44-379
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               44-383
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 43
               

               Conread position:
               44-384
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               47-335
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               47-335
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               47-339
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               140, 146
               

               Conread position:
               47-380
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               131, 138
               

               Conread position:
               48-380
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               48-384
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               53-380
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 38
               

               Conread position:
               60-383
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               60-384
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               61-383
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               61-384
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               282, 276
               

               Conread position:
               65-384
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 85
               

               Conread position:
               67-335
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               96-384
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               133, 114
               

               Conread position:
               100-348
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               74, 96
               

               Conread position:
               109-335
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               169, 156
               

               Conread position:
               109-384
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               153, 106
               

               Conread position:
               114-269
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-384
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               127-384
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               124, 132
               
Show alignments to all cow chromosomes.