Cow genome map

Conread name: Ss1.1-ruio22_o15.5

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 75

Conread position: 2-383
Cow position:
Alignm length: 382
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-384
Cow position:
Alignm length: 380
Alignm identity: 239
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 6-384
Cow position:
Alignm length: 381
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 7-384
Cow position:
Alignm length: 378
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-384
Cow position:
Alignm length: 379
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 92

Conread position: 8-384
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 79

Conread position: 9-383
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 18

Conread position: 9-384
Cow position:
Alignm length: 376
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-291
Cow position:
Alignm length: 281
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 11-334
Cow position:
Alignm length: 324
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 11-338
Cow position:
Alignm length: 329
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 87

Conread position: 11-380
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 162, 169

Conread position: 11-383
Cow position:
Alignm length: 376
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 99, 91

Conread position: 11-383
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 68

Conread position: 11-383
Cow position:
Alignm length: 374
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 48

Conread position: 11-384
Cow position:
Alignm length: 378
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 76

Conread position: 11-384
Cow position:
Alignm length: 376
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 244, 258

Conread position: 11-384
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 91

Conread position: 11-384
Cow position:
Alignm length: 376
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 162, 177

Conread position: 11-384
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-384
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-335
Cow position:
Alignm length: 321
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 280, 117

Conread position: 16-339
Cow position:
Alignm length: 326
Alignm identity: 210
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 94, 81

Conread position: 16-383
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 165, 175

Conread position: 16-384
Cow position:
Alignm length: 369
Alignm identity: 240
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 19-302
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 8, 87

Conread position: 20-384
Cow position:
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 85

Conread position: 20-384
Cow position:
Alignm length: 366
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 152, 160

Conread position: 27-223
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 147

Conread position: 27-246
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 100, 25

Conread position: 27-253
Cow position:
Alignm length: 228
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 52

Conread position: 27-254
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 27-306
Cow position:
Alignm length: 280
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-325
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 240

Conread position: 27-334
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 27-375
Cow position:
Alignm length: 350
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 250, 239

Conread position: 27-380
Cow position:
Alignm length: 355
Alignm identity: 227
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 133, 138

Conread position: 27-383
Cow position:
Alignm length: 358
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 13

Conread position: 27-383
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 72, 52

Conread position: 27-383
Cow position:
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 27-384
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 238

Conread position: 27-384
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 27-384
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 27-384
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 245, 238

Conread position: 27-384
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 27-384
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-384
Cow position:
Alignm length: 360
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 65, 52

Conread position: 27-384
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 52

Conread position: 28-335
Cow position:
Alignm length: 308
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 28-383
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 247, 256

Conread position: 28-383
Cow position:
Alignm length: 357
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 51

Conread position: 28-384
Cow position:
Alignm length: 358
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 13

Conread position: 28-384
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 234, 24

Conread position: 28-384
Cow position:
Alignm length: 358
Alignm identity: 232
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 51

Conread position: 28-384
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 312

Conread position: 28-384
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 28-384
Cow position:
Alignm length: 357
Alignm identity: 231
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 29-236
Cow position:
Alignm length: 208
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 29-339
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 30-302
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 49

Conread position: 30-383
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-383
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-384
Cow position:
Alignm length: 357
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 153, 164

Conread position: 30-384
Cow position:
Alignm length: 355
Alignm identity: 211
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 31-335
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 76

Conread position: 31-338
Cow position:
Alignm length: 309
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 145, 149

Conread position: 31-383
Cow position:
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 69

Conread position: 31-384
Cow position:
Alignm length: 354
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 31-384
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 79, 66

Conread position: 31-384
Cow position:
Alignm length: 355
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 318

Conread position: 33-384
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 34-384
Cow position:
Alignm length: 351
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-383
Cow position:
Alignm length: 348
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 42

Conread position: 39-384
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 22

Conread position: 43-384
Cow position:
Alignm length: 347
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 299

Conread position: 44-367
Cow position:
Alignm length: 326
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 66, 59

Conread position: 44-384
Cow position:
Alignm length: 341
Alignm identity: 222
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 44-384
Cow position:
Alignm length: 341
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 46-348
Cow position:
Alignm length: 306
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 162

Conread position: 47-383
Cow position:
Alignm length: 337
Alignm identity: 222
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 48-380
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 53-383
Cow position:
Alignm length: 332
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 141

Conread position: 127-384
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 219, 212

Show alignments to all cow chromosomes.