Cow genome map
| Conread name: | Ss1.1-ruio22_o15.5 |
| Conread position: | 1-384 |
| Cow position: | chr2:78754218-78754599 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 11-384 |
| Cow position: | chr2:78755552-78755923 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 99, 92 |
| Conread position: | 15-380 |
| Cow position: | chr2:78755138-78755502 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 17-324 |
| Cow position: | chr2:78756060-78756365 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 24-384 |
| Cow position: | chr2:78755063-78755422 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 27-363 |
| Cow position: | chr2:78755318-78755652 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 27-380 |
| Cow position: | chr2:78754982-78755335 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 84 |
| Conread position: | 27-384 |
| Cow position: | chr2:78754898-78755255 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 27-384 |
| Cow position: | chr2:82799592-82799949 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 28-279 |
| Cow position: | chr2:78754579-78754826 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 28-330 |
| Cow position: | chr2:48689474-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 244, 73 |
| Conread position: | 28-362 |
| Cow position: | chr2:78754495-78754825 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 28-379 |
| Cow position: | chr2:82800097-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 82, 69 |
| Conread position: | 28-384 |
| Cow position: | chr2:82799845-82800201 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 250, 239 |
| Conread position: | 29-384 |
| Cow position: | chr2:78755988-78756342 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 30-384 |
| Cow position: | chr2:78754817-78755171 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 44-383 |
| Cow position: | chr2:78755667-78756006 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 53-338 |
| Cow position: | chr2:82799534-82799819 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 53-383 |
| Cow position: | chr2:78755510-78755838 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 54-355 |
| Cow position: | chr2:86465863-86466164 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 56-329 |
| Cow position: | chr2:82799453-82799726 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 61-326 |
| Cow position: | chr2:82799794-82800059 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 214, 204 |
| Conread position: | 61-383 |
| Cow position: | chr2:82800046-82800368 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 109-384 |
| Cow position: | chr2:78754812-78755087 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-383 |
| Cow position: | chr2:82799454-82799696 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.