Cow genome map
| Conread name: | Ss1.1-ruio22_o15.5 |
| Conread position: | 1-383 |
| Cow position: | chr6:49340443-49340825 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 1-384 |
| Cow position: | chr6:49340947-49341330 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 96 |
| Conread position: | 11-245 |
| Cow position: | chr6:49341209-49341443 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-384 |
| Cow position: | chr6:49340369-49340742 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-338 |
| Cow position: | chr6:49341129-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 0 |
| Conread position: | 27-315 |
| Cow position: | chr6:49396358-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 27-329 |
| Cow position: | chr6:49396694-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 27-338 |
| Cow position: | chr6:49429133-49429444 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 245, 240 |
| Conread position: | 27-339 |
| Cow position: | chr6:49396112-49396418 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 27-339 |
| Cow position: | chr6:49396274-49396586 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 60 |
| Conread position: | 27-383 |
| Cow position: | chr6:49340553-49340909 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 83, 69 |
| Conread position: | 27-383 |
| Cow position: | chr6:49340721-49341077 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-383 |
| Cow position: | chr6:49340805-49341161 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 27-384 |
| Cow position: | chr6:49340637-49340994 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 240, 217 |
| Conread position: | 27-384 |
| Cow position: | chr6:49341057-49341414 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 69 |
| Conread position: | 28-384 |
| Cow position: | chr6:49340890-49341246 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-384 |
| Cow position: | chr6:49396029-49396379 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 30-384 |
| Cow position: | chr6:49340230-49340574 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 70-339 |
| Cow position: | chr6:49396233-49396502 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-384 |
| Cow position: | chr6:49340365-49340658 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.