Cow genome map

Conread name: Ss1.1-ruio22_o15.5

Conread position: 1-251
Cow position: chr8:48406583-48406333 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 86

Conread position: 1-380
Cow position: chr8:55581113-55581492 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 86

Conread position: 1-383
Cow position: chr8:48407003-48406621 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 61, 48

Conread position: 1-383
Cow position: chr8:48407255-48406873 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 352

Conread position: 1-383
Cow position: chr8:48407507-48407125 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 86

Conread position: 1-383
Cow position: chr8:55580945-55581327 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 78

Conread position: 1-384
Cow position: chr8:55581197-55581580 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-384
Cow position: chr8:48407417-48407040 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 11-251
Cow position: chr8:6958031-6957791 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-381
Cow position: chr8:55581295-55581661 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 15-384
Cow position: chr8:48406905-48406536 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 232
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 144, 163

Conread position: 16-384
Cow position: chr8:46816771-46817139 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 93, 86

Conread position: 16-384
Cow position: chr8:48407156-48406788 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 253, 239

Conread position: 22-362
Cow position: chr8:45201666-45202006 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 57

Conread position: 22-384
Cow position: chr8:45201498-45201860 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-384
Cow position: chr8:48407650-48407292 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 17

Conread position: 27-290
Cow position: chr8:55581475-55581738 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 49

Conread position: 27-323
Cow position: chr8:55581391-55581687 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 78, 71

Conread position: 27-339
Cow position: chr8:45201587-45201899 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 250, 239

Conread position: 27-339
Cow position: chr8:48406641-48406329 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 200
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 60

Conread position: 27-379
Cow position: chr8:46817034-46817386 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 27-383
Cow position: chr8:45200999-45201355 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 22

Conread position: 27-383
Cow position: chr8:45201167-45201523 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 81

Conread position: 27-383
Cow position: chr8:45201251-45201607 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 49

Conread position: 27-383
Cow position: chr8:46816278-46816634 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 76

Conread position: 27-383
Cow position: chr8:48407313-48406957 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 52

Conread position: 27-383
Cow position: chr8:55581055-55581411 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-384
Cow position: chr8:45201335-45201692 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 29, 22

Conread position: 27-384
Cow position: chr8:45201419-45201776 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-384
Cow position: chr8:46816110-46816467 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-384
Cow position: chr8:46816446-46816803 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 27-384
Cow position: chr8:46816530-46816887 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 27-384
Cow position: chr8:48407565-48407208 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 60

Conread position: 28-321
Cow position: chr8:48407060-48406767 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 59

Conread position: 28-380
Cow position: chr8:48406808-48406456 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 76

Conread position: 28-383
Cow position: chr8:46816615-46816970 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 67

Conread position: 28-384
Cow position: chr8:46815940-46816299 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 19, 51

Conread position: 28-384
Cow position: chr8:46816363-46816719 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 28-384
Cow position: chr8:46816867-46817223 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 29-384
Cow position: chr8:45201085-45201440 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 50

Conread position: 29-384
Cow position: chr8:46816196-46816551 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-384
Cow position: chr8:46816700-46817055 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 253

Conread position: 30-384
Cow position: chr8:55580890-55581244 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 80

Conread position: 36-384
Cow position: chr8:46816035-46816383 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 144

Conread position: 43-378
Cow position: chr8:46816968-46817301 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 11

Conread position: 43-383
Cow position: chr8:55580736-55581075 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 6

Conread position: 48-384
Cow position: chr8:45200936-45201272 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 49-383
Cow position: chr8:48406703-48406369 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 33

Conread position: 66-384
Cow position: chr8:45200786-45201104 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 203
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 16

Conread position: 67-384
Cow position: chr8:6958059-6957743 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 270, 283

Conread position: 68-383
Cow position: chr8:55580844-55581159 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.