Cow genome map


           Conread name:
           Ss1.1-ruio22_o15.5
        

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               9-384
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 10
               

               Conread position:
               11-383
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 68
               

               Conread position:
               12-383
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-383
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               27-232
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               27-302
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 153
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               27-383
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               320, 312
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 70
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               64, 55
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               162, 167
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 167
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               78, 85
               

               Conread position:
               27-384
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               28-302
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 70
               

               Conread position:
               28-323
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-384
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               82, 70
               

               Conread position:
               30-383
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               31-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 81
               

               Conread position:
               36-384
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-384
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               44-380
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               48-335
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               48-335
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               61-384
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 121
               

               Conread position:
               115-384
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.