Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-278
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 1-295
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 207, 78

Conread position: 1-375
Cow position:
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 1-375
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 7

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 117

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 12

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 124

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 81

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 71

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 122

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 56

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-409
Cow position:
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 111

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-417
Cow position:
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 78

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 2-367
Cow position:
Alignm length: 368
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 192, 88

Conread position: 7-418
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 62

Conread position: 21-377
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 104

Conread position: 32-381
Cow position:
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 7

Conread position: 130-411
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 227, 137

Conread position: 137-366
Cow position:
Alignm length: 230
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 352-509
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 383-503
Cow position:
Alignm length: 122
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 99

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 385-503
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 385-508
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 22

Conread position: 385-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 7, 93

Conread position: 385-531
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 385-538
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 386-544
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 386-544
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 387-495
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 387-531
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 69

Conread position: 390-567
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 61

Conread position: 392-753
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 82

Conread position: 399-508
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 441-575
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 48

Conread position: 668-947
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 200

Conread position: 674-948
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 133

Conread position: 762-947
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 64

Conread position: 825-945
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 13

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 19

Show alignments to all cow chromosomes.