Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-126
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 1-294
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 283, 18

Conread position: 1-323
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 52

Conread position: 1-373
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 127

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-377
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 292, 92

Conread position: 1-377
Cow position:
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 71

Conread position: 1-379
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 136

Conread position: 1-380
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 205, 39

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 137

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 214

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 123

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 24

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 20

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 127

Conread position: 1-381
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 199, 107

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 12

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 67

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 128

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 78

Conread position: 1-383
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-384
Cow position:
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 226

Conread position: 1-384
Cow position:
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 97

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 123

Conread position: 1-408
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 79

Conread position: 1-409
Cow position:
Alignm length: 414
Alignm identity: 283
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 208, 71

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 78

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 95

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 78

Conread position: 1-417
Cow position:
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-421
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 111

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 36

Conread position: 2-409
Cow position:
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 126

Conread position: 2-417
Cow position:
Alignm length: 417
Alignm identity: 279
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 355, 81

Conread position: 3-287
Cow position:
Alignm length: 285
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 3-381
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 125

Conread position: 5-322
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 5-377
Cow position:
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 29

Conread position: 6-380
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 351, 66

Conread position: 16-295
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 112, 0

Conread position: 20-381
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 102

Conread position: 20-409
Cow position:
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 101

Conread position: 21-265
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 40-409
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 39

Conread position: 73-380
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 284, 52

Conread position: 73-417
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 150-381
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 207, 0

Conread position: 158-384
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 199, 0

Conread position: 210-352
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 380-580
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 65

Conread position: 381-509
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 383-510
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 384-479
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 384-506
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 384-509
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 384-509
Cow position:
Alignm length: 127
Alignm identity: 108
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 384-531
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 53

Conread position: 384-533
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 384-544
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 384-777
Cow position:
Alignm length: 400
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 52

Conread position: 385-508
Cow position:
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 385-509
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 385-509
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 385-531
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 124

Conread position: 385-531
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 66

Conread position: 385-534
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 385-598
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 152, 45

Conread position: 385-599
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 31

Conread position: 385-641
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 6

Conread position: 386-479
Cow position:
Alignm length: 94
Alignm identity: 85
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-486
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 386-492
Cow position:
Alignm length: 107
Alignm identity: 94
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 386-507
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-507
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 105
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 26

Conread position: 386-523
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 18

Conread position: 386-531
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 386-544
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 36

Conread position: 386-544
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 386-544
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 386-545
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 388-503
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 388-508
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 388-598
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 52

Conread position: 402-599
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 133, 110

Conread position: 502-748
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 223, 95

Conread position: 591-947
Cow position:
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 72

Conread position: 597-869
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 12

Conread position: 597-893
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 15

Conread position: 608-947
Cow position:
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 21

Conread position: 631-948
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 49

Conread position: 680-948
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 143

Conread position: 732-948
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 62

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 20

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 42

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 42

Conread position: 825-948
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 19

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 38

Show alignments to all cow chromosomes.