Cow genome map
| Conread name: | Ss1.1-ruio34_e2.5 |
| Conread position: | 1-222 |
| Cow position: | chr18:19540075-19539865 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 1-228 |
| Cow position: | chr18:37585863-37585648 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-230 |
| Cow position: | chr18:25349839-25350057 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-253 |
| Cow position: | chr18:32651796-32652036 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 110 |
| Conread position: | 1-276 |
| Cow position: | chr18:51660217-51660481 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-330 |
| Cow position: | chr18:27986829-27987145 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-369 |
| Cow position: | chr18:44621559-44621917 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 124 |
| Conread position: | 1-375 |
| Cow position: | chr18:17992761-17992401 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 68 |
| Conread position: | 1-375 |
| Cow position: | chr18:32293575-32293931 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 126 |
| Conread position: | 1-375 |
| Cow position: | chr18:51310383-51310749 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 1-380 |
| Cow position: | chr18:1520929-1521297 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 129 |
| Conread position: | 1-381 |
| Cow position: | chr18:16533783-16534148 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 1-381 |
| Cow position: | chr18:23797451-23797817 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 115 |
| Conread position: | 1-381 |
| Cow position: | chr18:23944571-23944205 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 1-381 |
| Cow position: | chr18:33268641-33268995 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 124 |
| Conread position: | 1-381 |
| Cow position: | chr18:33358668-33359036 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 78 |
| Conread position: | 1-381 |
| Cow position: | chr18:33953767-33953399 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 1-381 |
| Cow position: | chr18:35335289-35335649 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 1-381 |
| Cow position: | chr18:36508133-36508502 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-381 |
| Cow position: | chr18:37504865-37505233 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 76 |
| Conread position: | 1-381 |
| Cow position: | chr18:39748382-39748748 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 77 |
| Conread position: | 1-381 |
| Cow position: | chr18:40478183-40478553 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 122 |
| Conread position: | 1-381 |
| Cow position: | chr18:43147124-43146756 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 1-381 |
| Cow position: | chr18:47719766-47719414 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 273 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 1-381 |
| Cow position: | chr18:48221678-48222049 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 17 |
| Conread position: | 1-381 |
| Cow position: | chr18:51257783-51258153 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 124 |
| Conread position: | 1-381 |
| Cow position: | chr18:54024555-54024190 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 18 |
| Conread position: | 1-381 |
| Cow position: | chr18:54172043-54171690 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 360, 129 |
| Conread position: | 1-383 |
| Cow position: | chr18:2019883-2019514 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 76 |
| Conread position: | 1-383 |
| Cow position: | chr18:28974098-28973731 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 20 |
| Conread position: | 1-384 |
| Cow position: | chr18:33335671-33336040 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 76 |
| Conread position: | 1-408 |
| Cow position: | chr18:6869455-6869060 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 75 |
| Conread position: | 1-409 |
| Cow position: | chr18:9186963-9186568 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 1-409 |
| Cow position: | chr18:16078503-16078917 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 274, 76 |
| Conread position: | 1-409 |
| Cow position: | chr18:19352186-19352585 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-409 |
| Cow position: | chr18:47741818-47742218 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-409 |
| Cow position: | chr18:55089125-55088725 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-411 |
| Cow position: | chr18:16176806-16176410 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 356, 109 |
| Conread position: | 1-417 |
| Cow position: | chr18:14415779-14416186 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 78 |
| Conread position: | 1-417 |
| Cow position: | chr18:41841025-41840615 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-417 |
| Cow position: | chr18:51480640-51481049 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 76 |
| Conread position: | 1-425 |
| Cow position: | chr18:22602287-22602702 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-429 |
| Cow position: | chr18:43200865-43201268 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 2-370 |
| Cow position: | chr18:16660203-16659846 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 126 |
| Conread position: | 3-381 |
| Cow position: | chr18:37599725-37599372 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 5-368 |
| Cow position: | chr18:16877290-16877634 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 355, 74 |
| Conread position: | 5-409 |
| Cow position: | chr18:11275296-11274906 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 107 |
| Conread position: | 20-380 |
| Cow position: | chr18:53785660-53786008 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 67 |
| Conread position: | 28-375 |
| Cow position: | chr18:16393814-16393483 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 325, 97 |
| Conread position: | 30-409 |
| Cow position: | chr18:29236647-29237010 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 93 |
| Conread position: | 32-384 |
| Cow position: | chr18:51689458-51689797 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 59 |
| Conread position: | 51-381 |
| Cow position: | chr18:2887173-2886851 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 66-258 |
| Cow position: | chr18:22869620-22869801 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 66-381 |
| Cow position: | chr18:54044836-54044538 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 78-381 |
| Cow position: | chr18:35288409-35288708 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 206, 47 |
| Conread position: | 80-409 |
| Cow position: | chr18:51341565-51341886 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 45 |
| Conread position: | 145-381 |
| Cow position: | chr18:14130322-14130554 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 212, 119 |
| Conread position: | 171-383 |
| Cow position: | chr18:52650890-52651092 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 186, 80 |
| Conread position: | 215-408 |
| Cow position: | chr18:114398-114590 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 141, 20 |
| Conread position: | 225-429 |
| Cow position: | chr18:24040720-24040519 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 132, 170 |
| Conread position: | 228-409 |
| Cow position: | chr18:51463059-51462878 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 157, 117 |
| Conread position: | 234-381 |
| Cow position: | chr18:19539558-19539410 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 381-509 |
| Cow position: | chr18:47719354-47719226 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-542 |
| Cow position: | chr18:1521377-1521539 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 383-593 |
| Cow position: | chr18:35289550-35289760 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 384-503 |
| Cow position: | chr18:2019452-2019335 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 384-503 |
| Cow position: | chr18:33359098-33359217 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-503 |
| Cow position: | chr18:35335712-35335831 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-503 |
| Cow position: | chr18:43146693-43146574 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-508 |
| Cow position: | chr18:16534211-16534335 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-508 |
| Cow position: | chr18:23944142-23944018 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr18:6869026-6868901 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr18:17992188-17992063 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr18:19539347-19539227 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 384-509 |
| Cow position: | chr18:33269058-33269183 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr18:39748811-39748935 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 384-509 |
| Cow position: | chr18:48222112-48222236 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 384-530 |
| Cow position: | chr18:53786072-53786218 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 139, 78 |
| Conread position: | 384-531 |
| Cow position: | chr18:54044489-54044342 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 143, 47 |
| Conread position: | 384-544 |
| Cow position: | chr18:51310818-51310976 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 385-538 |
| Cow position: | chr18:51629675-51629822 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 385-541 |
| Cow position: | chr18:51258217-51258372 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 385-579 |
| Cow position: | chr18:16877704-16877890 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 385-599 |
| Cow position: | chr18:29763604-29763812 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 157, 27 |
| Conread position: | 385-599 |
| Cow position: | chr18:37599308-37599095 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 151, 113 |
| Conread position: | 385-607 |
| Cow position: | chr18:2886788-2886564 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 385-704 |
| Cow position: | chr18:56462669-56462352 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 112 |
| Conread position: | 385-948 |
| Cow position: | chr18:54171626-54171064 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 386-495 |
| Cow position: | chr18:28973668-28973559 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-495 |
| Cow position: | chr18:47742253-47742362 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-495 |
| Cow position: | chr18:55088690-55088581 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr18:11274871-11274754 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr18:19352620-19352734 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 386-503 |
| Cow position: | chr18:24040498-24040380 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 386-503 |
| Cow position: | chr18:33336097-33336214 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr18:51341921-51342038 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr18:33953334-33953218 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 386-508 |
| Cow position: | chr18:40478618-40478739 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 386-508 |
| Cow position: | chr18:51689859-51689981 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr18:14416211-14416333 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 386-509 |
| Cow position: | chr18:24700880-24700755 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 386-509 |
| Cow position: | chr18:36508567-36508690 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr18:41840590-41840467 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr18:55504758-55504639 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 386-539 |
| Cow position: | chr18:16078952-16079107 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 144 |
| Conread position: | 386-543 |
| Cow position: | chr18:51462843-51462682 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 386-544 |
| Cow position: | chr18:23797882-23798043 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 386-599 |
| Cow position: | chr18:16843103-16842892 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 154, 50 |
| Conread position: | 386-898 |
| Cow position: | chr18:29237043-29237558 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 428 |
| Conread position: | 387-470 |
| Cow position: | chr18:114625-114708 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-508 |
| Cow position: | chr18:22602724-22602844 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-591 |
| Cow position: | chr18:54269851-54270017 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 698-948 |
| Cow position: | chr18:8168921-8169175 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 704-879 |
| Cow position: | chr18:51275709-51275529 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 134 |
| Conread position: | 770-947 |
| Cow position: | chr18:29765259-29765445 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 818-943 |
| Cow position: | chr18:54003863-54003989 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 825-943 |
| Cow position: | chr18:52651270-52651386 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr18:14130740-14130863 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 825-947 |
| Cow position: | chr18:14416326-14416450 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 825-947 |
| Cow position: | chr18:23797998-23798118 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 825-947 |
| Cow position: | chr18:24700762-24700640 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr18:27837966-27837844 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 825-947 |
| Cow position: | chr18:33269176-33269298 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr18:33336213-33336337 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 825-947 |
| Cow position: | chr18:36508683-36508805 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr18:37505414-37505535 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 825-947 |
| Cow position: | chr18:54023774-54023653 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 825-948 |
| Cow position: | chr18:16534329-16534452 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 825-948 |
| Cow position: | chr18:40478733-40478856 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-948 |
| Cow position: | chr18:41840474-41840351 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 831-947 |
| Cow position: | chr18:28973546-28973430 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 70, 29 |
Show alignments to all cow chromosomes.