Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 126

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 110

Conread position: 1-276
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 0

Conread position: 1-330
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-369
Cow position:
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 124

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 68

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 126

Conread position: 1-375
Cow position:
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 122

Conread position: 1-380
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 129

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 115

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 124

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 27

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 76

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 77

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 122

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 8, 79

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 17

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 124

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 18

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 360, 129

Conread position: 1-383
Cow position:
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 76

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 20

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-408
Cow position:
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 75

Conread position: 1-409
Cow position:
Alignm length: 414
Alignm identity: 268
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 38

Conread position: 1-409
Cow position:
Alignm length: 430
Alignm identity: 295
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 274, 76

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-411
Cow position:
Alignm length: 420
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 356, 109

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-417
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 76

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-429
Cow position:
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 79

Conread position: 2-370
Cow position:
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 126

Conread position: 3-381
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 5-368
Cow position:
Alignm length: 365
Alignm identity: 233
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 355, 74

Conread position: 5-409
Cow position:
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 107

Conread position: 20-380
Cow position:
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 67

Conread position: 28-375
Cow position:
Alignm length: 349
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 325, 97

Conread position: 30-409
Cow position:
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 93

Conread position: 32-384
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 59

Conread position: 51-381
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 66-258
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 66-381
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 78-381
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 206, 47

Conread position: 80-409
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 45

Conread position: 145-381
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 212, 119

Conread position: 171-383
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 186, 80

Conread position: 215-408
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 141, 20

Conread position: 225-429
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 132, 170

Conread position: 228-409
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 157, 117

Conread position: 234-381
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 381-509
Cow position:
Alignm length: 129
Alignm identity: 112
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 383-542
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 129, 0

Conread position: 383-593
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 13

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 102
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-508
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-508
Cow position:
Alignm length: 125
Alignm identity: 105
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 111
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 106
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 384-530
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 78

Conread position: 384-531
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 143, 47

Conread position: 384-544
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 385-538
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 385-541
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 141, 0

Conread position: 385-579
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 385-599
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 157, 27

Conread position: 385-599
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 151, 113

Conread position: 385-607
Cow position:
Alignm length: 225
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 385-704
Cow position:
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 112

Conread position: 385-948
Cow position:
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 40

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 99
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 95
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 386-503
Cow position:
Alignm length: 119
Alignm identity: 103
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 105
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 386-509
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 386-539
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 144

Conread position: 386-543
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 24

Conread position: 386-544
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 386-599
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 154, 50

Conread position: 386-898
Cow position:
Alignm length: 522
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 428

Conread position: 387-470
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 388-508
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 428-591
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 698-948
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 13

Conread position: 704-879
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 134

Conread position: 770-947
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 818-943
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 21

Conread position: 825-943
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 44

Conread position: 825-947
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 43

Conread position: 825-947
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 20

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 19

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 19

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 36

Conread position: 831-947
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 70, 29

Show alignments to all cow chromosomes.