Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-264
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 1-298
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 1-330
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 122

Conread position: 1-367
Cow position:
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-371
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-372
Cow position:
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 33

Conread position: 1-375
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 127

Conread position: 1-376
Cow position:
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 127

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 75

Conread position: 1-378
Cow position:
Alignm length: 382
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 30

Conread position: 1-380
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 139

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 98

Conread position: 1-380
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 76

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 7

Conread position: 1-380
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 112

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 68

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 15

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 37

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 123

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 124

Conread position: 1-383
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 81

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 124

Conread position: 1-409
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 78

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-421
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 78

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 78

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 75

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 128

Conread position: 1-434
Cow position:
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 75

Conread position: 2-376
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 129

Conread position: 2-381
Cow position:
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 122

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 126

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 182, 101

Conread position: 5-378
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 74

Conread position: 5-384
Cow position:
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 123

Conread position: 5-592
Cow position:
Alignm length: 594
Alignm identity: 378
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 101

Conread position: 6-380
Cow position:
Alignm length: 386
Alignm identity: 252
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 263, 119

Conread position: 10-381
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 118

Conread position: 15-374
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 54

Conread position: 17-384
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 111

Conread position: 20-381
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 22

Conread position: 41-408
Cow position:
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 84

Conread position: 79-377
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 50

Conread position: 83-381
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 39

Conread position: 89-394
Cow position:
Alignm length: 311
Alignm identity: 201
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 82

Conread position: 138-372
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 0

Conread position: 139-381
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 219, 0

Conread position: 139-381
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 166, 0

Conread position: 139-384
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 139-425
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 271

Conread position: 181-381
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 176, 0

Conread position: 354-503
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 14

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 384-510
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 384-532
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 0

Conread position: 385-502
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 385-947
Cow position:
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 114

Conread position: 385-948
Cow position:
Alignm length: 578
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 150

Conread position: 386-481
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-489
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 386-494
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 105
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 103
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 386-532
Cow position:
Alignm length: 147
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 386-534
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 386-544
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 0

Conread position: 386-716
Cow position:
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 386-897
Cow position:
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 140

Conread position: 386-948
Cow position:
Alignm length: 576
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 35

Conread position: 387-509
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 20

Conread position: 387-893
Cow position:
Alignm length: 515
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 74

Conread position: 388-948
Cow position:
Alignm length: 586
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 80

Conread position: 396-564
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 29

Conread position: 407-947
Cow position:
Alignm length: 549
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 267

Conread position: 603-948
Cow position:
Alignm length: 350
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 121, 19

Conread position: 670-947
Cow position:
Alignm length: 281
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 43

Conread position: 720-948
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 101

Conread position: 725-948
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 733-947
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 741-945
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 94, 201

Conread position: 822-944
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 38

Conread position: 825-945
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 43

Conread position: 825-946
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 36

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 19

Conread position: 825-948
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 19

Conread position: 835-947
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 842-948
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 88

Show alignments to all cow chromosomes.