Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-123
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-233
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 1-286
Cow position:
Alignm length: 286
Alignm identity: 197
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 256, 82

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 208, 78

Conread position: 1-346
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 1-362
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 68

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 52

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 52

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 75

Conread position: 1-380
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 1-380
Cow position:
Alignm length: 403
Alignm identity: 279
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 312

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 129

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 138

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 126

Conread position: 1-381
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 49

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 37

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 38

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 86

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 122

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 19

Conread position: 1-382
Cow position:
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 111

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 97

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 75

Conread position: 1-406
Cow position:
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 124

Conread position: 1-408
Cow position:
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 17

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 1-409
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 96

Conread position: 1-409
Cow position:
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 129

Conread position: 1-411
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 39

Conread position: 1-418
Cow position:
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-421
Cow position:
Alignm length: 422
Alignm identity: 286
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 356, 35

Conread position: 1-575
Cow position:
Alignm length: 591
Alignm identity: 386
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 292, 82

Conread position: 2-366
Cow position:
Alignm length: 371
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 302, 111

Conread position: 2-379
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 228, 63

Conread position: 2-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 36

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 39

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 77

Conread position: 3-377
Cow position:
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 125

Conread position: 3-381
Cow position:
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 58

Conread position: 4-344
Cow position:
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 13-381
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 112

Conread position: 16-381
Cow position:
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 56

Conread position: 18-383
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 59

Conread position: 21-375
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 252, 41

Conread position: 23-409
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 78, 28

Conread position: 30-373
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 95

Conread position: 31-409
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 97

Conread position: 33-381
Cow position:
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 92

Conread position: 36-381
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 321, 15

Conread position: 48-373
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 76

Conread position: 60-409
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 68

Conread position: 65-381
Cow position:
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 14

Conread position: 73-377
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 250, 55

Conread position: 73-381
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 268, 55

Conread position: 130-353
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 37

Conread position: 133-381
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 61

Conread position: 141-408
Cow position:
Alignm length: 272
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 216, 243

Conread position: 155-381
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 202, 0

Conread position: 155-421
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 202, 18

Conread position: 210-381
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 147, 0

Conread position: 210-509
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 77

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 105
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 109
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 384-531
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 143, 0

Conread position: 384-540
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 148

Conread position: 384-618
Cow position:
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 385-579
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 156, 63

Conread position: 385-597
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 54

Conread position: 385-599
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 156, 52

Conread position: 385-707
Cow position:
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 148

Conread position: 385-721
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 111

Conread position: 385-914
Cow position:
Alignm length: 538
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 170

Conread position: 385-941
Cow position:
Alignm length: 573
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 72

Conread position: 385-945
Cow position:
Alignm length: 570
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 354

Conread position: 385-947
Cow position:
Alignm length: 574
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 25

Conread position: 386-487
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-487
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 96
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 94
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 103
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-531
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 386-538
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 118, 143

Conread position: 386-541
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 152, 119

Conread position: 386-544
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 386-544
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 49

Conread position: 386-623
Cow position:
Alignm length: 241
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 155

Conread position: 386-948
Cow position:
Alignm length: 578
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 54

Conread position: 387-509
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 387-509
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 387-509
Cow position:
Alignm length: 124
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 387-510
Cow position:
Alignm length: 126
Alignm identity: 107
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 388-503
Cow position:
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 388-503
Cow position:
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 388-509
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 388-574
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 389-534
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 400-941
Cow position:
Alignm length: 553
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 167

Conread position: 404-509
Cow position:
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 409-545
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 122

Conread position: 494-724
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 501-942
Cow position:
Alignm length: 454
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 86

Conread position: 508-855
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 117, 179

Conread position: 568-945
Cow position:
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 36

Conread position: 609-888
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 68

Conread position: 625-947
Cow position:
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 679-947
Cow position:
Alignm length: 274
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 108

Conread position: 680-945
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 721-943
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 96

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 25

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 36

Conread position: 825-947
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 43

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 36

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 36

Conread position: 834-945
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 10

Show alignments to all cow chromosomes.