Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-126
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 1-317
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 77, 0

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-377
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 71

Conread position: 1-380
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 129

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 57

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 29

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 77

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-401
Cow position:
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 12

Conread position: 1-407
Cow position:
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-408
Cow position:
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 11

Conread position: 1-409
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 128

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 127

Conread position: 1-409
Cow position:
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 76

Conread position: 1-409
Cow position:
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 35

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 98

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 71

Conread position: 1-421
Cow position:
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 124

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-429
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 77

Conread position: 1-429
Cow position:
Alignm length: 432
Alignm identity: 294
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 38

Conread position: 1-789
Cow position:
Alignm length: 794
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 71

Conread position: 1-825
Cow position:
Alignm length: 825
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 2-325
Cow position:
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 79

Conread position: 2-380
Cow position:
Alignm length: 381
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 250, 77

Conread position: 2-381
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 123

Conread position: 3-381
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 122

Conread position: 4-409
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 118

Conread position: 6-409
Cow position:
Alignm length: 421
Alignm identity: 290
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 106, 27

Conread position: 39-377
Cow position:
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 54-417
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 69

Conread position: 62-382
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 112-417
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 288

Conread position: 137-348
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 137-384
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 36

Conread position: 139-384
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 166

Conread position: 139-409
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 125, 53

Conread position: 146-599
Cow position:
Alignm length: 463
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 162-380
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 195, 164

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 384-541
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 384-575
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 26

Conread position: 385-516
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 385-526
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 385-601
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 151, 27

Conread position: 385-606
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 162, 111

Conread position: 385-948
Cow position:
Alignm length: 579
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 120

Conread position: 385-948
Cow position:
Alignm length: 579
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 206

Conread position: 386-479
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-485
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-485
Cow position:
Alignm length: 100
Alignm identity: 88
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 94
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 104
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 386-503
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-532
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-541
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 386-598
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 150, 21

Conread position: 386-894
Cow position:
Alignm length: 520
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 98

Conread position: 387-538
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 15

Conread position: 388-509
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 388-510
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 388-526
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 388-585
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 0

Conread position: 388-591
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 119, 51

Conread position: 388-592
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 148, 0

Conread position: 522-947
Cow position:
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 169

Conread position: 582-945
Cow position:
Alignm length: 380
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 251

Conread position: 587-947
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 107, 38

Conread position: 597-943
Cow position:
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 30

Conread position: 597-948
Cow position:
Alignm length: 362
Alignm identity: 233
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 32

Conread position: 626-943
Cow position:
Alignm length: 334
Alignm identity: 217
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 33

Conread position: 629-947
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 70, 100

Conread position: 635-948
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 24

Conread position: 639-948
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 724-947
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 139

Conread position: 725-948
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 44

Conread position: 736-945
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 140

Conread position: 810-948
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 817-947
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 825-945
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 41

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 76, 42

Conread position: 830-945
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 830-948
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 14

Show alignments to all cow chromosomes.