Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 1-295
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 1-377
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 128

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 68

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 22

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 24

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 111

Conread position: 1-409
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 87

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 111

Conread position: 1-429
Cow position:
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 115

Conread position: 1-442
Cow position:
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 33

Conread position: 2-264
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 125

Conread position: 2-354
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 82

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 126

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 91

Conread position: 51-205
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 69

Conread position: 73-380
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 153, 29

Conread position: 101-310
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 100

Conread position: 137-330
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 155-383
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 193, 0

Conread position: 210-377
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 210-381
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 143, 92

Conread position: 237-381
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 257-377
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 89

Conread position: 383-507
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 385-597
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 385-597
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 385-892
Cow position:
Alignm length: 514
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 99

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 105
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 387-508
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 388-587
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 672-866
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 89

Conread position: 673-868
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 63, 157

Conread position: 673-924
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 124

Conread position: 738-947
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 17, 60

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 42

Conread position: 830-947
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 31

Show alignments to all cow chromosomes.