Cow genome map
| Conread name: | Ss1.1-ruio34_e2.5 |
| Conread position: | 1-253 |
| Cow position: | chr28:1168412-1168174 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-253 |
| Cow position: | chr28:34593595-34593832 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-286 |
| Cow position: | chr28:15681645-15681913 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-295 |
| Cow position: | chr28:29819322-29819603 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-350 |
| Cow position: | chr28:5812462-5812794 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 82 |
| Conread position: | 1-377 |
| Cow position: | chr28:2591672-2592032 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 50 |
| Conread position: | 1-377 |
| Cow position: | chr28:14750300-14750665 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 1-377 |
| Cow position: | chr28:24587185-24587552 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 127 |
| Conread position: | 1-379 |
| Cow position: | chr28:8721690-8721328 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 78 |
| Conread position: | 1-380 |
| Cow position: | chr28:8378319-8378685 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 76 |
| Conread position: | 1-381 |
| Cow position: | chr28:1387638-1387273 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 41 |
| Conread position: | 1-381 |
| Cow position: | chr28:1815115-1814746 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 68 |
| Conread position: | 1-381 |
| Cow position: | chr28:5565613-5565984 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 122 |
| Conread position: | 1-381 |
| Cow position: | chr28:7001740-7002111 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 122 |
| Conread position: | 1-381 |
| Cow position: | chr28:7901106-7901476 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 78 |
| Conread position: | 1-381 |
| Cow position: | chr28:9155531-9155158 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 40 |
| Conread position: | 1-381 |
| Cow position: | chr28:10582233-10581865 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 100 |
| Conread position: | 1-381 |
| Cow position: | chr28:13441125-13440755 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-381 |
| Cow position: | chr28:13459723-13460091 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-381 |
| Cow position: | chr28:14705919-14705550 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 68 |
| Conread position: | 1-381 |
| Cow position: | chr28:15920714-15920344 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-381 |
| Cow position: | chr28:17388233-17388603 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 129 |
| Conread position: | 1-381 |
| Cow position: | chr28:17667760-17667392 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 1-381 |
| Cow position: | chr28:32792627-32792258 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 127 |
| Conread position: | 1-384 |
| Cow position: | chr28:15950733-15951104 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-408 |
| Cow position: | chr28:21325541-21325941 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 1-409 |
| Cow position: | chr28:7822006-7822409 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 130 |
| Conread position: | 1-417 |
| Cow position: | chr28:22261399-22260989 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-418 |
| Cow position: | chr28:21358772-21359164 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 78 |
| Conread position: | 1-451 |
| Cow position: | chr28:18520709-18520278 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 1-878 |
| Cow position: | chr28:7816986-7817820 (view UCSC Genome Browser custom track) |
| Alignm length: | 895 |
| Alignm identity: | 619 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 2-373 |
| Cow position: | chr28:34324581-34324926 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 355, 98 |
| Conread position: | 2-381 |
| Cow position: | chr28:2083357-2083717 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 121 |
| Conread position: | 3-381 |
| Cow position: | chr28:9953889-9954254 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 123 |
| Conread position: | 3-381 |
| Cow position: | chr28:26426518-26426156 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 63 |
| Conread position: | 5-409 |
| Cow position: | chr28:1952890-1953281 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 29 |
| Conread position: | 5-417 |
| Cow position: | chr28:34648693-34649104 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 351, 64 |
| Conread position: | 10-381 |
| Cow position: | chr28:10619340-10618993 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 68 |
| Conread position: | 20-380 |
| Cow position: | chr28:24652062-24652401 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 105 |
| Conread position: | 21-250 |
| Cow position: | chr28:5752105-5751886 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 102 |
| Conread position: | 21-380 |
| Cow position: | chr28:15378220-15377871 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 102 |
| Conread position: | 21-381 |
| Cow position: | chr28:3193019-3192670 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 102 |
| Conread position: | 22-277 |
| Cow position: | chr28:2989909-2989672 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 47-381 |
| Cow position: | chr28:24667379-24667700 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 58 |
| Conread position: | 73-381 |
| Cow position: | chr28:5114976-5114690 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 284, 55 |
| Conread position: | 130-434 |
| Cow position: | chr28:6657437-6657131 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 166, 59 |
| Conread position: | 137-380 |
| Cow position: | chr28:7790421-7790166 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 198 |
| Conread position: | 140-381 |
| Cow position: | chr28:9137169-9136929 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 54 |
| Conread position: | 157-357 |
| Cow position: | chr28:22233791-22233593 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 158-384 |
| Cow position: | chr28:2724993-2724766 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 181-381 |
| Cow position: | chr28:12410299-12410102 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 200-409 |
| Cow position: | chr28:12233057-12232848 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 210-408 |
| Cow position: | chr28:4380889-4380694 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 147, 95 |
| Conread position: | 355-943 |
| Cow position: | chr28:10071134-10071704 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 271 |
| Conread position: | 383-508 |
| Cow position: | chr28:17324162-17324036 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 384-502 |
| Cow position: | chr28:13490335-13490453 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr28:1931800-1931678 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 384-509 |
| Cow position: | chr28:2592099-2592224 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr28:4380660-4380535 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-510 |
| Cow position: | chr28:9136867-9136742 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 384-544 |
| Cow position: | chr28:7901539-7901711 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 384-544 |
| Cow position: | chr28:24652932-24652772 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 131, 153 |
| Conread position: | 385-542 |
| Cow position: | chr28:8721262-8721105 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 385-591 |
| Cow position: | chr28:34649128-34649335 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 385-599 |
| Cow position: | chr28:2845989-2845780 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 385-619 |
| Cow position: | chr28:21325976-21326200 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 191, 70 |
| Conread position: | 385-621 |
| Cow position: | chr28:10618929-10618702 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 223, 113 |
| Conread position: | 385-723 |
| Cow position: | chr28:2989531-2989184 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 110 |
| Conread position: | 385-945 |
| Cow position: | chr28:5797617-5798167 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 100 |
| Conread position: | 385-947 |
| Cow position: | chr28:5812877-5813433 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 74 |
| Conread position: | 385-947 |
| Cow position: | chr28:7790099-7789527 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 208 |
| Conread position: | 385-948 |
| Cow position: | chr28:21359187-21359763 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 446 |
| Conread position: | 386-482 |
| Cow position: | chr28:1505038-1505134 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-484 |
| Cow position: | chr28:17667327-17667229 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-495 |
| Cow position: | chr28:5114625-5114516 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr28:485376-485259 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr28:1953316-1953433 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr28:6780147-6780030 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr28:7822444-7822561 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr28:14750733-14750850 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr28:24587621-24587738 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:1814681-1814559 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:2724704-2724584 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:6539075-6538953 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:13440690-13440568 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:13460156-13460278 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:15377806-15377684 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr28:26426065-26425943 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:1167695-1167572 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:1387213-1387091 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:3192605-3192482 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:5751520-5751396 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:7002176-7002299 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:8378755-8378878 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:9954319-9954442 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:10581800-10581675 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:18520273-18520150 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:29819920-29820043 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr28:32792193-32792071 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 386-531 |
| Cow position: | chr28:782581-782726 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 386-532 |
| Cow position: | chr28:24667766-24667911 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 386-544 |
| Cow position: | chr28:12150491-12150651 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 137, 50 |
| Conread position: | 387-509 |
| Cow position: | chr28:17388669-17388791 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-544 |
| Cow position: | chr28:12410038-12409880 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 388-508 |
| Cow position: | chr28:30805499-30805379 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-599 |
| Cow position: | chr28:10462962-10462750 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 389-509 |
| Cow position: | chr28:14705482-14705362 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 394-595 |
| Cow position: | chr28:11357519-11357320 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 157 |
| Conread position: | 396-538 |
| Cow position: | chr28:22233203-22233057 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 134 |
| Conread position: | 411-563 |
| Cow position: | chr28:2886518-2886666 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 452-873 |
| Cow position: | chr28:5764499-5764911 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 106 |
| Conread position: | 512-855 |
| Cow position: | chr28:28117808-28118161 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 38 |
| Conread position: | 597-811 |
| Cow position: | chr28:11356989-11356764 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 660-895 |
| Cow position: | chr28:24704363-24704609 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 65, 239 |
| Conread position: | 666-947 |
| Cow position: | chr28:14913652-14913940 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 705-948 |
| Cow position: | chr28:10497840-10497590 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 713-947 |
| Cow position: | chr28:10617638-10617407 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 12, 122 |
| Conread position: | 728-947 |
| Cow position: | chr28:2989037-2988817 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 736-913 |
| Cow position: | chr28:14946849-14947026 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 737-945 |
| Cow position: | chr28:32330490-32330282 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 739-948 |
| Cow position: | chr28:3020525-3020325 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 740-947 |
| Cow position: | chr28:29436652-29436440 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 822-947 |
| Cow position: | chr28:22260852-22260727 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 825-945 |
| Cow position: | chr28:5113996-5113876 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:782697-782817 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 825-947 |
| Cow position: | chr28:1167579-1167458 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 825-947 |
| Cow position: | chr28:1505166-1505289 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 825-947 |
| Cow position: | chr28:1814565-1814443 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:5566447-5566569 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:5751403-5751281 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:5937778-5937900 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 825-947 |
| Cow position: | chr28:7002292-7002414 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 825-947 |
| Cow position: | chr28:10581682-10581561 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 825-947 |
| Cow position: | chr28:14705369-14705247 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 825-947 |
| Cow position: | chr28:17388784-17388907 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 825-947 |
| Cow position: | chr28:26425949-26425827 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:29820036-29820158 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 825-947 |
| Cow position: | chr28:32792078-32791956 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:33252614-33252736 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr28:34594281-34594402 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 830-948 |
| Cow position: | chr28:7901669-7901788 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 834-947 |
| Cow position: | chr28:2083905-2084018 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 835-947 |
| Cow position: | chr28:12409916-12409804 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 33 |
Show alignments to all cow chromosomes.