Cow genome map
| Conread name: | Ss1.1-ruio34_e2.5 |
| Conread position: | 1-136 |
| Cow position: | chr29:9644003-9643871 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-270 |
| Cow position: | chr29:12796746-12796498 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 193, 29 |
| Conread position: | 1-273 |
| Cow position: | chr29:31121526-31121784 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-295 |
| Cow position: | chr29:32640506-32640779 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 159, 39 |
| Conread position: | 1-311 |
| Cow position: | chr29:34609227-34608934 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 268, 58 |
| Conread position: | 1-374 |
| Cow position: | chr29:10848398-10848028 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 1-375 |
| Cow position: | chr29:21427337-21426974 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 118 |
| Conread position: | 1-377 |
| Cow position: | chr29:610893-610529 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 90 |
| Conread position: | 1-377 |
| Cow position: | chr29:7840514-7840880 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-377 |
| Cow position: | chr29:16109447-16109810 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 1-377 |
| Cow position: | chr29:19623526-19623164 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 76 |
| Conread position: | 1-377 |
| Cow position: | chr29:27041042-27040681 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 77 |
| Conread position: | 1-377 |
| Cow position: | chr29:32539528-32539894 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-380 |
| Cow position: | chr29:6266774-6266415 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 26 |
| Conread position: | 1-380 |
| Cow position: | chr29:10648527-10648165 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 78 |
| Conread position: | 1-380 |
| Cow position: | chr29:32315758-32316127 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-380 |
| Cow position: | chr29:35196394-35196753 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 68 |
| Conread position: | 1-381 |
| Cow position: | chr29:48758-48391 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 127 |
| Conread position: | 1-381 |
| Cow position: | chr29:2099562-2099932 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-381 |
| Cow position: | chr29:2689623-2689989 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 1-381 |
| Cow position: | chr29:5957321-5957691 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 86 |
| Conread position: | 1-381 |
| Cow position: | chr29:11049002-11049366 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 76 |
| Conread position: | 1-381 |
| Cow position: | chr29:15895130-15894763 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 76 |
| Conread position: | 1-381 |
| Cow position: | chr29:16769850-16770210 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 1-381 |
| Cow position: | chr29:19652826-19653195 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 122 |
| Conread position: | 1-381 |
| Cow position: | chr29:23975550-23975927 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 131 |
| Conread position: | 1-381 |
| Cow position: | chr29:26165104-26164735 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 88 |
| Conread position: | 1-381 |
| Cow position: | chr29:27250617-27250247 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 127 |
| Conread position: | 1-381 |
| Cow position: | chr29:39079988-39079625 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 122 |
| Conread position: | 1-381 |
| Cow position: | chr29:40503261-40502893 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 134 |
| Conread position: | 1-381 |
| Cow position: | chr29:43322277-43322647 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-381 |
| Cow position: | chr29:45459437-45459802 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 76 |
| Conread position: | 1-383 |
| Cow position: | chr29:2841647-2841280 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 76 |
| Conread position: | 1-384 |
| Cow position: | chr29:104297-104657 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 65 |
| Conread position: | 1-384 |
| Cow position: | chr29:15969430-15969060 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 111 |
| Conread position: | 1-384 |
| Cow position: | chr29:28060948-28060574 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 127 |
| Conread position: | 1-409 |
| Cow position: | chr29:35296596-35296991 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 48 |
| Conread position: | 1-417 |
| Cow position: | chr29:7431498-7431088 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-417 |
| Cow position: | chr29:20250877-20251287 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 122 |
| Conread position: | 1-417 |
| Cow position: | chr29:38226712-38227107 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 57 |
| Conread position: | 1-418 |
| Cow position: | chr29:25932826-25932416 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 127 |
| Conread position: | 1-418 |
| Cow position: | chr29:34800088-34799680 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 33 |
| Conread position: | 2-358 |
| Cow position: | chr29:43366277-43365936 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 11 |
| Conread position: | 2-377 |
| Cow position: | chr29:10824240-10823886 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 129 |
| Conread position: | 2-377 |
| Cow position: | chr29:21543656-21543285 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 147 |
| Conread position: | 2-381 |
| Cow position: | chr29:31180842-31181211 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 126 |
| Conread position: | 2-409 |
| Cow position: | chr29:13853301-13852906 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 45 |
| Conread position: | 4-381 |
| Cow position: | chr29:21246289-21246657 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 119 |
| Conread position: | 5-380 |
| Cow position: | chr29:1714973-1715328 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 237, 74 |
| Conread position: | 23-296 |
| Cow position: | chr29:17662661-17662930 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 104 |
| Conread position: | 30-383 |
| Cow position: | chr29:16022278-16022619 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 47 |
| Conread position: | 31-383 |
| Cow position: | chr29:30811283-30811618 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 104-409 |
| Cow position: | chr29:670247-669940 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 137-381 |
| Cow position: | chr29:11855441-11855683 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 138-409 |
| Cow position: | chr29:24198778-24198505 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 165, 155 |
| Conread position: | 139-380 |
| Cow position: | chr29:5983335-5983094 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 55 |
| Conread position: | 139-381 |
| Cow position: | chr29:27981073-27980830 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 139-409 |
| Cow position: | chr29:19884914-19885187 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 147-317 |
| Cow position: | chr29:43791033-43791202 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 147-381 |
| Cow position: | chr29:14585780-14586009 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 210, 200 |
| Conread position: | 210-378 |
| Cow position: | chr29:42650200-42650369 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 210-378 |
| Cow position: | chr29:42802060-42802229 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 210-381 |
| Cow position: | chr29:18857029-18856857 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 213-409 |
| Cow position: | chr29:2466418-2466217 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 237-381 |
| Cow position: | chr29:9643816-9643672 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 120, 137 |
| Conread position: | 379-587 |
| Cow position: | chr29:803205-802999 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 384-503 |
| Cow position: | chr29:16770273-16770392 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr29:21543219-21543094 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-509 |
| Cow position: | chr29:27040619-27040497 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 384-509 |
| Cow position: | chr29:35196814-35196939 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-599 |
| Cow position: | chr29:15950041-15949828 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 153, 120 |
| Conread position: | 384-947 |
| Cow position: | chr29:14086298-14085745 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 385-509 |
| Cow position: | chr29:11049429-11049553 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-532 |
| Cow position: | chr29:21426873-21426732 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 385-571 |
| Cow position: | chr29:30811679-30811859 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 385-587 |
| Cow position: | chr29:104718-104913 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 151, 86 |
| Conread position: | 385-591 |
| Cow position: | chr29:1715393-1715598 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 150, 57 |
| Conread position: | 386-477 |
| Cow position: | chr29:10847940-10847849 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-482 |
| Cow position: | chr29:6266349-6266253 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-494 |
| Cow position: | chr29:15894698-15894590 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-495 |
| Cow position: | chr29:2841221-2841112 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-495 |
| Cow position: | chr29:27980765-27980658 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 386-503 |
| Cow position: | chr29:610460-610343 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr29:669905-669788 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr29:18856792-18856675 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr29:19885222-19885339 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr29:31181567-31181684 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-503 |
| Cow position: | chr29:35297026-35297143 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr29:15968709-15968587 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr29:27250190-27250068 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-508 |
| Cow position: | chr29:34925631-34925753 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:2466182-2466059 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:2690053-2690175 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:5957756-5957879 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 386-509 |
| Cow position: | chr29:9643604-9643481 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:14586074-14586197 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:19623095-19622972 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:19653260-19653383 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:25932392-25932269 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:26164670-26164547 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:32539962-32540085 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr29:45587208-45587085 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-531 |
| Cow position: | chr29:410373-410228 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-531 |
| Cow position: | chr29:16022682-16022827 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-531 |
| Cow position: | chr29:23975992-23976137 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-495 |
| Cow position: | chr29:7840949-7841057 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-508 |
| Cow position: | chr29:20251312-20251433 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-520 |
| Cow position: | chr29:2750264-2750135 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 388-503 |
| Cow position: | chr29:13582223-13582337 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 388-509 |
| Cow position: | chr29:43322709-43322829 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 391-705 |
| Cow position: | chr29:5983051-5982738 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 232 |
| Conread position: | 430-618 |
| Cow position: | chr29:8331136-8330955 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 432-591 |
| Cow position: | chr29:13648882-13649037 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 519-670 |
| Cow position: | chr29:2749931-2749783 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 597-888 |
| Cow position: | chr29:2951458-2951165 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 634-947 |
| Cow position: | chr29:15949478-15949160 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 668-947 |
| Cow position: | chr29:802831-802542 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 698-947 |
| Cow position: | chr29:105161-105416 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 725-927 |
| Cow position: | chr29:9617452-9617662 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 193 |
| Conread position: | 730-947 |
| Cow position: | chr29:31488193-31488417 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 753-947 |
| Cow position: | chr29:5982506-5982328 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 820-948 |
| Cow position: | chr29:10647988-10647860 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 822-947 |
| Cow position: | chr29:410260-410136 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 825-946 |
| Cow position: | chr29:19653376-19653497 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr29:2100113-2100235 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 825-947 |
| Cow position: | chr29:2690168-2690290 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr29:6266233-6266111 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr29:7430951-7430829 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr29:10823701-10823579 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr29:20251427-20251548 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 825-947 |
| Cow position: | chr29:26164554-26164433 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr29:32540078-32540200 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr29:34300501-34300378 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 825-947 |
| Cow position: | chr29:38227248-38227369 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-947 |
| Cow position: | chr29:42650533-42650655 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr29:42802393-42802515 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 825-947 |
| Cow position: | chr29:43322822-43322943 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 825-948 |
| Cow position: | chr29:19622979-19622857 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 825-948 |
| Cow position: | chr29:21426762-21426639 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 830-947 |
| Cow position: | chr29:39079439-39079321 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 834-947 |
| Cow position: | chr29:40502707-40502594 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 23 |
Show alignments to all cow chromosomes.