Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 1-270
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 193, 29

Conread position: 1-273
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-295
Cow position:
Alignm length: 297
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 159, 39

Conread position: 1-311
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 268, 58

Conread position: 1-374
Cow position:
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 37

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 118

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 90

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-377
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 71

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-377
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 77

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 26

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-380
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 68

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 78

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 86

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 78

Conread position: 1-381
Cow position:
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 122

Conread position: 1-381
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 131

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 88

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 122

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 134

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 76

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 65

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 111

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 48

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 57

Conread position: 1-418
Cow position:
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 127

Conread position: 1-418
Cow position:
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 33

Conread position: 2-358
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 11

Conread position: 2-377
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 129

Conread position: 2-377
Cow position:
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 147

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 126

Conread position: 2-409
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 45

Conread position: 4-381
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 119

Conread position: 5-380
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 237, 74

Conread position: 23-296
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 104

Conread position: 30-383
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 47

Conread position: 31-383
Cow position:
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 104-409
Cow position:
Alignm length: 308
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 253, 0

Conread position: 137-381
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 38

Conread position: 138-409
Cow position:
Alignm length: 276
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 165, 155

Conread position: 139-380
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 55

Conread position: 139-381
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 139-409
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 218, 0

Conread position: 147-317
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 155, 0

Conread position: 147-381
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 210, 200

Conread position: 210-378
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 210-378
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 147, 0

Conread position: 210-381
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 147, 0

Conread position: 213-409
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 142, 0

Conread position: 237-381
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 137

Conread position: 379-587
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 29

Conread position: 384-503
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 384-599
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 153, 120

Conread position: 384-947
Cow position:
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 27

Conread position: 385-509
Cow position:
Alignm length: 125
Alignm identity: 104
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 385-532
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 385-571
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 103, 43

Conread position: 385-587
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 151, 86

Conread position: 385-591
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 57

Conread position: 386-477
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-482
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-494
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 386-509
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 95

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-531
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-531
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-531
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 387-495
Cow position:
Alignm length: 109
Alignm identity: 94
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 387-508
Cow position:
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 387-520
Cow position:
Alignm length: 134
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 388-503
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 388-509
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 391-705
Cow position:
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 232

Conread position: 430-618
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 432-591
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 68

Conread position: 519-670
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 103

Conread position: 597-888
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 147

Conread position: 634-947
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 20

Conread position: 668-947
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 23, 28

Conread position: 698-947
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 125

Conread position: 725-927
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 193

Conread position: 730-947
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 18

Conread position: 753-947
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 820-948
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 47

Conread position: 822-947
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 825-946
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 38

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 38

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 42

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 825-948
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 19

Conread position: 830-947
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 38

Conread position: 834-947
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 23

Show alignments to all cow chromosomes.