Cow genome map

Conread name: Ss1.1-ruio34_e2.5

Conread position: 1-126
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-187
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 1-272
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 127, 0

Conread position: 1-303
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 260, 122

Conread position: 1-376
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 127

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-380
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 33

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 88

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 120

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 23

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 79

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 69

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 125

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 125

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 7

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 79

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 122

Conread position: 1-381
Cow position:
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 98

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 48

Conread position: 1-382
Cow position:
Alignm length: 383
Alignm identity: 246
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 356, 99

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 124

Conread position: 1-384
Cow position:
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 29

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 78

Conread position: 1-409
Cow position:
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-411
Cow position:
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 80

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 121

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 1-417
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 122

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 127

Conread position: 2-381
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 133

Conread position: 2-381
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 74

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 121

Conread position: 4-538
Cow position:
Alignm length: 562
Alignm identity: 362
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 99

Conread position: 5-409
Cow position:
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 101

Conread position: 5-409
Cow position:
Alignm length: 410
Alignm identity: 262
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 90

Conread position: 7-273
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 12-381
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 55

Conread position: 12-381
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 287, 34

Conread position: 21-380
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 58

Conread position: 22-269
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 16

Conread position: 40-381
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 169, 60

Conread position: 50-381
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 77

Conread position: 73-381
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 284, 14

Conread position: 137-381
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 139-381
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 164, 39

Conread position: 139-381
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 165

Conread position: 148-377
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 9

Conread position: 149-377
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 176, 26

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 384-509
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 385-587
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 53

Conread position: 385-692
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 385-718
Cow position:
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 279

Conread position: 385-948
Cow position:
Alignm length: 572
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 108

Conread position: 386-484
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 386-485
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-487
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-491
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 94
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 96
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-495
Cow position:
Alignm length: 110
Alignm identity: 95
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 102
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-503
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 103
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 104
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 386-508
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 386-509
Cow position:
Alignm length: 124
Alignm identity: 107
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 386-531
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 386-532
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 386-534
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 386-538
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 386-551
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 51

Conread position: 386-705
Cow position:
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 386-947
Cow position:
Alignm length: 575
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 180

Conread position: 389-578
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 147, 23

Conread position: 389-599
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 151, 49

Conread position: 391-866
Cow position:
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 26

Conread position: 393-509
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 418-573
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 140, 122

Conread position: 430-599
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 480-710
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 135

Conread position: 700-948
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 100

Conread position: 707-948
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 52

Conread position: 707-948
Cow position:
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 202

Conread position: 762-948
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 18

Conread position: 783-943
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 92

Conread position: 825-945
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 825-945
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 19

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 35

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 42

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 35

Conread position: 825-947
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 35

Conread position: 830-947
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 14

Conread position: 831-947
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 70, 36

Conread position: 834-947
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 33

Show alignments to all cow chromosomes.