Cow genome map


           Conread name:
           Ss1.1-rute2101b_i8.5
        

               Conread position:
               1-76
               

               Cow position:
               
               

               Alignm length:
               76
               

               Alignm identity:
               71
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-78
               

               Cow position:
               
               

               Alignm length:
               78
               

               Alignm identity:
               71
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-333
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-376
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               140, 158
               

               Conread position:
               207-376
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               140, 158
               

               Conread position:
               207-383
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 158
               

               Conread position:
               210-318
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-318
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-323
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-346
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-376
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               143, 154
               

               Conread position:
               220-323
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               453-652
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               453-654
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               470-652
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               517-652
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               534-652
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1016-1309
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 58
               

               Conread position:
               1016-1309
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               1021-1309
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 150
               

               Conread position:
               1023-1305
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1023-1309
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               1023-1309
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               1023-1314
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 174
               

               Conread position:
               1027-1284
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               1076-1306
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1077-1304
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1077-1309
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1077-1309
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.