Cow genome map


           Conread name:
           Ss1.1-rvin01_g22.5
        

               Conread position:
               5-206
               

               Cow position:
               chr17:20238292-20238094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               5-313
               

               Cow position:
               chr17:15902445-15902139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               7-225
               

               Cow position:
               chr17:265163-265379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               7-311
               

               Cow position:
               chr17:8476221-8475917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               7-313
               

               Cow position:
               chr17:16895040-16894738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               7-334
               

               Cow position:
               chr17:5818056-5818386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               8-322
               

               Cow position:
               chr17:19778489-19778171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               126, 68
               

               Conread position:
               9-312
               

               Cow position:
               chr17:14632007-14632313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               19-209
               

               Cow position:
               chr17:9556919-9557108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               33-314
               

               Cow position:
               chr17:16885708-16885426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               107-313
               

               Cow position:
               chr17:36063753-36063545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               115-317
               

               Cow position:
               chr17:11797659-11797451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 60
               
Show alignments to all cow chromosomes.