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Cow genome map

           
Conread name:
           
Ss1.1-uFN-UNL-P-FN-bb-g-10-0-UNL.s1.3
        

               
Conread position:
               
81-428
               

               
Cow position:
               
chr22:28058220-28057860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
87-368
               

               
Cow position:
               
chr22:8840433-8840728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
87-378
               

               
Cow position:
               
chr22:8116241-8115957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr22:31870413-31870057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 159
               

               
Conread position:
               
87-448
               

               
Cow position:
               
chr22:40071817-40072162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
89-363
               

               
Cow position:
               
chr22:32651346-32651609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
89-442
               

               
Cow position:
               
chr22:24915682-24916026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr22:34104823-34104539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
95-432
               

               
Cow position:
               
chr22:27619579-27619923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
97-381
               

               
Cow position:
               
chr22:38980744-38981022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
97-456
               

               
Cow position:
               
chr22:22612958-22613312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
98-354
               

               
Cow position:
               
chr22:6936120-6936365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
98-359
               

               
Cow position:
               
chr22:2523811-2524077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
98-378
               

               
Cow position:
               
chr22:3316969-3317255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
98-430
               

               
Cow position:
               
chr22:14378832-14378508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr22:11600887-11601244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
100-375
               

               
Cow position:
               
chr22:3253100-3252829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
100-377
               

               
Cow position:
               
chr22:21295873-21295595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
100-377
               

               
Cow position:
               
chr22:22223039-22223323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
100-378
               

               
Cow position:
               
chr22:3965032-3965319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
100-442
               

               
Cow position:
               
chr22:16095049-16094710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
102-429
               

               
Cow position:
               
chr22:17259305-17258979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
102-442
               

               
Cow position:
               
chr22:39215758-39215416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
103-456
               

               
Cow position:
               
chr22:11697333-11696985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
104-373
               

               
Cow position:
               
chr22:44574996-44574723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
104-437
               

               
Cow position:
               
chr22:16053165-16053504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
105-441
               

               
Cow position:
               
chr22:14372038-14372362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
105-442
               

               
Cow position:
               
chr22:15668618-15668286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
23, 155
               

               
Conread position:
               
105-454
               

               
Cow position:
               
chr22:10685232-10684890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
105-456
               

               
Cow position:
               
chr22:32326659-32327009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
106-350
               

               
Cow position:
               
chr22:9283744-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 142
               

               
Conread position:
               
106-352
               

               
Cow position:
               
chr22:11458685-11458922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
106-359
               

               
Cow position:
               
chr22:7851820-7852076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
106-368
               

               
Cow position:
               
chr22:22908048-22908309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
106-371
               

               
Cow position:
               
chr22:877369-877641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
106-375
               

               
Cow position:
               
chr22:19173556-19173832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:15025251-15024935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
106-430
               

               
Cow position:
               
chr22:7882411-7882734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
106-430
               

               
Cow position:
               
chr22:27066249-27066567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
106-434
               

               
Cow position:
               
chr22:26151255-26150928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr22:644908-644585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr22:3301467-3301140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr22:4563216-4563552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
106-445
               

               
Cow position:
               
chr22:6092793-6092464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
106-450
               

               
Cow position:
               
chr22:28370804-28371137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
106-454
               

               
Cow position:
               
chr22:11130727-11131077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
106-454
               

               
Cow position:
               
chr22:17152538-17152895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
106-454
               

               
Cow position:
               
chr22:19460179-19459836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
193, 42
               

               
Conread position:
               
106-455
               

               
Cow position:
               
chr22:23759155-23758800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
106-455
               

               
Cow position:
               
chr22:29641970-29642321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr22:18259081-18259424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr22:36433112-36432765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
107-253
               

               
Cow position:
               
chr22:6360632-6360480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
107-350
               

               
Cow position:
               
chr22:10669610-10669369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
107-442
               

               
Cow position:
               
chr22:17950105-17949781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
107-445
               

               
Cow position:
               
chr22:4560957-4560610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
108-451
               

               
Cow position:
               
chr22:14091359-14091016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
109-377
               

               
Cow position:
               
chr22:16327360-16327628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
109-404
               

               
Cow position:
               
chr22:3908782-3909091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
109-442
               

               
Cow position:
               
chr22:1654334-1653990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
109-445
               

               
Cow position:
               
chr22:3566036-3566366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
109-455
               

               
Cow position:
               
chr22:18193318-18193675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
109-456
               

               
Cow position:
               
chr22:17120329-17120662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
110-227
               

               
Cow position:
               
chr22:26123469-26123347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
110-366
               

               
Cow position:
               
chr22:17814085-17814353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr22:30269274-30269593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr22:31510507-31510171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
110-442
               

               
Cow position:
               
chr22:8138397-8138059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
110-442
               

               
Cow position:
               
chr22:28071419-28071754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
110-445
               

               
Cow position:
               
chr22:11767189-11766849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
111-297
               

               
Cow position:
               
chr22:45578828-45579017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
111-300
               

               
Cow position:
               
chr22:226590-226401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
111-355
               

               
Cow position:
               
chr22:27223991-27224237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
111-387
               

               
Cow position:
               
chr22:28351789-28351529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
226, 37
               

               
Conread position:
               
111-387
               

               
Cow position:
               
chr22:30113935-30114213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr22:41829368-41829040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr22:864656-864322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr22:2642975-2643323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr22:3987378-3987731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr22:4162724-4162373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr22:6754392-6754054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
112-440
               

               
Cow position:
               
chr22:34726535-34726869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
112-441
               

               
Cow position:
               
chr22:8418329-8418659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr22:6097162-6096807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr22:12929412-12929068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
113-442
               

               
Cow position:
               
chr22:37030656-37030328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
115-256
               

               
Cow position:
               
chr22:10292828-10292977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
115-256
               

               
Cow position:
               
chr22:12598953-12599096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
115-266
               

               
Cow position:
               
chr22:4974558-4974404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
115-274
               

               
Cow position:
               
chr22:10585835-10585676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
115-275
               

               
Cow position:
               
chr22:41271133-41270973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr22:25629897-25629723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
115-312
               

               
Cow position:
               
chr22:3241833-3241637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
115-312
               

               
Cow position:
               
chr22:7838460-7838656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
115-312
               

               
Cow position:
               
chr22:31592993-31592790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
115-337
               

               
Cow position:
               
chr22:27835396-27835625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
115-339
               

               
Cow position:
               
chr22:34398592-34398363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
115-346
               

               
Cow position:
               
chr22:9521012-9521245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
115-346
               

               
Cow position:
               
chr22:21355272-21355040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
115-354
               

               
Cow position:
               
chr22:5384517-5384761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
115-354
               

               
Cow position:
               
chr22:46568015-46567785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 24
               

               
Conread position:
               
115-356
               

               
Cow position:
               
chr22:26184296-26184050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 131
               

               
Conread position:
               
115-357
               

               
Cow position:
               
chr22:45846012-45846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
115-358
               

               
Cow position:
               
chr22:19047952-19047703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
115-358
               

               
Cow position:
               
chr22:24734446-24734204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr22:30483783-30484029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
115-365
               

               
Cow position:
               
chr22:24628784-24628538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
115-365
               

               
Cow position:
               
chr22:27740758-27741010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
115-367
               

               
Cow position:
               
chr22:23403781-23403520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
115-367
               

               
Cow position:
               
chr22:26658921-26659163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr22:23856915-23857173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
115-376
               

               
Cow position:
               
chr22:22155471-22155732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr22:1035952-1035680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr22:17295064-17294805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr22:28665151-28665416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr22:3950116-3950385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr22:16044555-16044283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr22:21530486-21530226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr22:27329026-27328760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr22:32895083-32895350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr22:43119862-43119596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
115-384
               

               
Cow position:
               
chr22:5337731-5337460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr22:15039316-15039043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr22:1590889-1591179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
115-419
               

               
Cow position:
               
chr22:38930644-38930331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
115-428
               

               
Cow position:
               
chr22:28146550-28146864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
115-428
               

               
Cow position:
               
chr22:31646359-31646665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
115-430
               

               
Cow position:
               
chr22:17126320-17126631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
115-433
               

               
Cow position:
               
chr22:21325868-21325549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
115-434
               

               
Cow position:
               
chr22:37029733-37029417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
115-436
               

               
Cow position:
               
chr22:10532368-10532683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr22:4108873-4108537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr22:6600814-6600484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr22:45796209-45796535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr22:1975478-1975812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr22:4535458-4535130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr22:9668431-9668772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr22:24611214-24610890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr22:41898580-41898256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr22:24584181-24583878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
184, 19
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr22:34441765-34441439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr22:8412394-8412725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr22:27274824-27274494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:6149516-6149192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:6721207-6720885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:7081895-7082225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:8429750-8430086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:9977686-9977990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:11613290-11613622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:11813855-11813528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:12313289-12313615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:12315677-12316004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:13286316-13286644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:16822969-16823313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:18021155-18020835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:26339622-26339960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:27171389-27171073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:27322182-27322494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:38439288-38438962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:40349216-40349537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr22:41853762-41854098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
115-443
               

               
Cow position:
               
chr22:15618480-15618804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr22:6215691-6215358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr22:10294909-10295227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr22:23181170-23180847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr22:24066368-24066045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr22:27818865-27819196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
115-446
               

               
Cow position:
               
chr22:28356905-28357227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr22:1484728-1485069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr22:2095418-2095758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr22:2623653-2623303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr22:22861043-22860708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr22:26041465-26041808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr22:46610914-46610575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr22:8302988-8302638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr22:38313599-38313269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr22:38940083-38939747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr22:39472510-39472156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
115-453
               

               
Cow position:
               
chr22:39508176-39507831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr22:12681931-12681587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr22:15490525-15490864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr22:16292051-16291725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr22:18926221-18926564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr22:40387025-40387359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr22:40789435-40789762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr22:4061080-4060739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr22:12573074-12573414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr22:25943342-25943668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr22:32698626-32698973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:1289649-1289320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:1309862-1309528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:6622379-6622043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:10302880-10303224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:11146772-11147118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:15568148-15567811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:26134365-26134011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:36563154-36562816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:41971291-41970949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr22:44410592-44410924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
116-342
               

               
Cow position:
               
chr22:15760236-15760458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
116-368
               

               
Cow position:
               
chr22:12968204-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
116-378
               

               
Cow position:
               
chr22:44180458-44180727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
116-381
               

               
Cow position:
               
chr22:13769341-13769612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
116-437
               

               
Cow position:
               
chr22:14245567-14245247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr22:19827998-19827669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr22:27047534-27047204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr22:37201720-37202040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
116-440
               

               
Cow position:
               
chr22:10161832-10162161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
116-441
               

               
Cow position:
               
chr22:44717579-44717915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr22:5616171-5616491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr22:8733464-8733150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr22:14844441-14844740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr22:30699046-30699361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 223
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr22:33399614-33399293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
116-445
               

               
Cow position:
               
chr22:6610482-6610159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
116-453
               

               
Cow position:
               
chr22:23980346-23980001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr22:10122258-10122576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
116-455
               

               
Cow position:
               
chr22:4157208-4156871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
116-455
               

               
Cow position:
               
chr22:40048423-40048767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr22:26097752-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
117-312
               

               
Cow position:
               
chr22:17993164-17992965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr22:22160592-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:26141144-26141386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
117-369
               

               
Cow position:
               
chr22:15090608-15090867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
117-370
               

               
Cow position:
               
chr22:21502611-21502867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
117-371
               

               
Cow position:
               
chr22:26969650-26969916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr22:37324414-37324669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr22:845770-846038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 260
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr22:13841005-13841273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
117-382
               

               
Cow position:
               
chr22:22997346-22997613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
117-384
               

               
Cow position:
               
chr22:41245113-41245393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
117-385
               

               
Cow position:
               
chr22:4017345-4017609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
117-387
               

               
Cow position:
               
chr22:4990300-4990029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
117-397
               

               
Cow position:
               
chr22:23854842-23855124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
117-436
               

               
Cow position:
               
chr22:16251697-16251375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
117-438
               

               
Cow position:
               
chr22:12803517-12803196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
117-438
               

               
Cow position:
               
chr22:20626709-20627025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
117-439
               

               
Cow position:
               
chr22:32480611-32480274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
117-440
               

               
Cow position:
               
chr22:29962279-29961957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:1563382-1563044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:3251125-3250784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:4356962-4357279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:17852757-17852442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:19341071-19341390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:27729919-27730236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:27825704-27826043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:41982847-41982527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr22:43397881-43398195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
117-445
               

               
Cow position:
               
chr22:22022758-22023103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
117-445
               

               
Cow position:
               
chr22:25222031-25221704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 125
               

               
Conread position:
               
117-448
               

               
Cow position:
               
chr22:43131683-43131351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
117-451
               

               
Cow position:
               
chr22:2123162-2123495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
117-453
               

               
Cow position:
               
chr22:5016380-5016696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
117-454
               

               
Cow position:
               
chr22:36560789-36560442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr22:21567863-21568201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr22:23689337-23688993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr22:27681583-27681935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
118-440
               

               
Cow position:
               
chr22:14178957-14178638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr22:4583427-4583757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr22:8090659-8090339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr22:15153867-15154198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr22:26786225-26786554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr22:39696160-39696493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
118-445
               

               
Cow position:
               
chr22:6709906-6709591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
118-455
               

               
Cow position:
               
chr22:7967571-7967905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
118-456
               

               
Cow position:
               
chr22:16532948-16533283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
118-456
               

               
Cow position:
               
chr22:34735737-34736057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
118-456
               

               
Cow position:
               
chr22:36132667-36133007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
119-358
               

               
Cow position:
               
chr22:10632789-10633027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
119-366
               

               
Cow position:
               
chr22:30049699-30049445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
119-438
               

               
Cow position:
               
chr22:1710397-1710726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
119-440
               

               
Cow position:
               
chr22:9127276-9127592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr22:10416085-10416422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr22:30998767-30999086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr22:30818081-30818411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
119-448
               

               
Cow position:
               
chr22:38977717-38978044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
119-452
               

               
Cow position:
               
chr22:23805112-23804779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
119-453
               

               
Cow position:
               
chr22:8732687-8732357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
120-364
               

               
Cow position:
               
chr22:14924861-14924613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
120-438
               

               
Cow position:
               
chr22:25361358-25361669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
120-442
               

               
Cow position:
               
chr22:8324120-8324444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
120-442
               

               
Cow position:
               
chr22:10983219-10983560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
120-442
               

               
Cow position:
               
chr22:23830803-23831126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
120-451
               

               
Cow position:
               
chr22:12800534-12800879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
120-455
               

               
Cow position:
               
chr22:23806671-23806327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
120-456
               

               
Cow position:
               
chr22:11370716-11370381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
122-387
               

               
Cow position:
               
chr22:30111367-30111641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 171
               

               
Conread position:
               
122-436
               

               
Cow position:
               
chr22:3533817-3534121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
123-433
               

               
Cow position:
               
chr22:30515126-30515455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
123-436
               

               
Cow position:
               
chr22:1848946-1849265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr22:1279507-1279266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
127-376
               

               
Cow position:
               
chr22:15020517-15020283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr22:1911549-1911810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
127-439
               

               
Cow position:
               
chr22:5467489-5467172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 230
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr22:13221990-13222321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
127-445
               

               
Cow position:
               
chr22:34476123-34475788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
127-453
               

               
Cow position:
               
chr22:45132772-45132444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
128-366
               

               
Cow position:
               
chr22:1266048-1265803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
128-376
               

               
Cow position:
               
chr22:32188968-32188723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
128-377
               

               
Cow position:
               
chr22:2627455-2627711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr22:23176557-23176307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
128-432
               

               
Cow position:
               
chr22:13670291-13669981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
128-436
               

               
Cow position:
               
chr22:10609234-10609548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
128-436
               

               
Cow position:
               
chr22:12388977-12389292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
128-436
               

               
Cow position:
               
chr22:31599330-31599622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
128-438
               

               
Cow position:
               
chr22:16621056-16621384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
128-441
               

               
Cow position:
               
chr22:534379-534684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:5837148-5837457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:7153766-7154071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:10339233-10338910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:16911913-16911604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:18196394-18196706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:27275348-27275661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr22:44740973-44741266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
128-443
               

               
Cow position:
               
chr22:21746523-21746835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
128-443
               

               
Cow position:
               
chr22:40374488-40374803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
128-450
               

               
Cow position:
               
chr22:3960403-3960096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
128-453
               

               
Cow position:
               
chr22:27828264-27828584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
128-454
               

               
Cow position:
               
chr22:23833170-23833496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
128-455
               

               
Cow position:
               
chr22:4076009-4075677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
128-455
               

               
Cow position:
               
chr22:13688222-13687907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr22:59490-59823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr22:1326299-1326628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr22:14143232-14142916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr22:33448201-33447868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr22:34618680-34619020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr22:43237527-43237189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
129-362
               

               
Cow position:
               
chr22:34712605-34712842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
129-430
               

               
Cow position:
               
chr22:10631267-10631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
129-442
               

               
Cow position:
               
chr22:9372404-9372722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
129-442
               

               
Cow position:
               
chr22:14691086-14690763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
129-456
               

               
Cow position:
               
chr22:1983735-1984067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
129-456
               

               
Cow position:
               
chr22:22013632-22013960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
130-440
               

               
Cow position:
               
chr22:3282937-3282635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr22:17132525-17132211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr22:17193272-17193590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr22:36539782-36539463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
130-454
               

               
Cow position:
               
chr22:32661391-32661722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
130-455
               

               
Cow position:
               
chr22:27577630-27577954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr22:2470358-2470027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr22:5290730-5291065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr22:25237265-25236918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
131-441
               

               
Cow position:
               
chr22:12829728-12829414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
132-355
               

               
Cow position:
               
chr22:12341079-12341306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
132-438
               

               
Cow position:
               
chr22:898731-899030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
132-438
               

               
Cow position:
               
chr22:12892482-12892169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr22:18838135-18838458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr22:13094283-13094507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr22:23736126-23735816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
133-449
               

               
Cow position:
               
chr22:6852698-6852378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
134-431
               

               
Cow position:
               
chr22:21415518-21415801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
134-441
               

               
Cow position:
               
chr22:617007-617316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
134-442
               

               
Cow position:
               
chr22:1105949-1106266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 118
               

               
Conread position:
               
134-442
               

               
Cow position:
               
chr22:15915156-15914850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
135-441
               

               
Cow position:
               
chr22:8800567-8800251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
135-442
               

               
Cow position:
               
chr22:4135505-4135789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
135-455
               

               
Cow position:
               
chr22:13957763-13957437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
137-442
               

               
Cow position:
               
chr22:30697049-30697344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
137-455
               

               
Cow position:
               
chr22:37947612-37947930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
138-339
               

               
Cow position:
               
chr22:29344771-29344971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
138-454
               

               
Cow position:
               
chr22:25246806-25247117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
139-366
               

               
Cow position:
               
chr22:10553791-10553564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
160, 73
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chr22:24222973-24223152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
140-456
               

               
Cow position:
               
chr22:1500783-1501095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
142-456
               

               
Cow position:
               
chr22:25809374-25809070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
144-456
               

               
Cow position:
               
chr22:25254074-25254385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
145-397
               

               
Cow position:
               
chr22:29389674-29389931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
148-365
               

               
Cow position:
               
chr22:26074825-26075041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
148-430
               

               
Cow position:
               
chr22:9597677-9597401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
148-430
               

               
Cow position:
               
chr22:33098507-33098210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 281
               

               
Conread position:
               
148-448
               

               
Cow position:
               
chr22:3058556-3058857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr22:39602185-39602494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr22:24732647-24732352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
208, 60
               

               
Conread position:
               
149-437
               

               
Cow position:
               
chr22:530662-530387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
149-454
               

               
Cow position:
               
chr22:5595904-5595600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
149-456
               

               
Cow position:
               
chr22:2409216-2408915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
150-436
               

               
Cow position:
               
chr22:26122802-26123098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
151-454
               

               
Cow position:
               
chr22:30606770-30607067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
151-455
               

               
Cow position:
               
chr22:7140548-7140856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
152-367
               

               
Cow position:
               
chr22:13932082-13932307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
152-371
               

               
Cow position:
               
chr22:23750986-23750771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
152-389
               

               
Cow position:
               
chr22:4315535-4315775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
152-424
               

               
Cow position:
               
chr22:18933813-18933533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
152-440
               

               
Cow position:
               
chr22:285452-285173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
190, 37
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr22:21413892-21414190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 175
               

               
Conread position:
               
152-443
               

               
Cow position:
               
chr22:24903496-24903788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr22:3842525-3842826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr22:4132478-4132787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
153-345
               

               
Cow position:
               
chr22:18293853-18293665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
153-439
               

               
Cow position:
               
chr22:13866570-13866861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
153-456
               

               
Cow position:
               
chr22:33522958-33522667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr22:24336436-24336740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
154-456
               

               
Cow position:
               
chr22:17652342-17652643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
155-375
               

               
Cow position:
               
chr22:10285876-10286100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
155-378
               

               
Cow position:
               
chr22:13878094-13878310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
155-442
               

               
Cow position:
               
chr22:1659072-1659363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
155-456
               

               
Cow position:
               
chr22:3430097-3430405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
156-436
               

               
Cow position:
               
chr22:43321259-43321542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
156-439
               

               
Cow position:
               
chr22:43977652-43977369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
156-456
               

               
Cow position:
               
chr22:4533963-4533660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
156-456
               

               
Cow position:
               
chr22:25690370-25690068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
157-384
               

               
Cow position:
               
chr22:29185696-29185473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 81
               

               
Conread position:
               
158-456
               

               
Cow position:
               
chr22:17359391-17359685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
159-413
               

               
Cow position:
               
chr22:27907960-27907709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
159-450
               

               
Cow position:
               
chr22:16541738-16541445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
159-455
               

               
Cow position:
               
chr22:12678506-12678212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
160-451
               

               
Cow position:
               
chr22:4209079-4208788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
160-454
               

               
Cow position:
               
chr22:14214448-14214160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
161-437
               

               
Cow position:
               
chr22:2109703-2109439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr22:25846403-25846180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
163-442
               

               
Cow position:
               
chr22:14545999-14545726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
163-452
               

               
Cow position:
               
chr22:21397987-21397710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
166-451
               

               
Cow position:
               
chr22:28340113-28340391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
167-368
               

               
Cow position:
               
chr22:10533515-10533716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
168-429
               

               
Cow position:
               
chr22:1025810-1026086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
168-442
               

               
Cow position:
               
chr22:42617921-42618191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
168-443
               

               
Cow position:
               
chr22:15050103-15050374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
169-440
               

               
Cow position:
               
chr22:1588217-1588489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
169-455
               

               
Cow position:
               
chr22:43965621-43965911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
170-438
               

               
Cow position:
               
chr22:12157918-12157657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr22:12981798-12981529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
172-456
               

               
Cow position:
               
chr22:23358078-23358362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
173-438
               

               
Cow position:
               
chr22:8287119-8287372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
178-354
               

               
Cow position:
               
chr22:4137718-4137542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
178-448
               

               
Cow position:
               
chr22:6176357-6176080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
178-448
               

               
Cow position:
               
chr22:21526852-21527111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
179-384
               

               
Cow position:
               
chr22:38549888-38550092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
179-432
               

               
Cow position:
               
chr22:15737166-15737416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
180-449
               

               
Cow position:
               
chr22:13720087-13719830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
183-438
               

               
Cow position:
               
chr22:18099555-18099811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
183-456
               

               
Cow position:
               
chr22:14647025-14647308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr22:17119755-17119987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
184-456
               

               
Cow position:
               
chr22:243050-243310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
186-442
               

               
Cow position:
               
chr22:5712531-5712780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
190-455
               

               
Cow position:
               
chr22:47525694-47525952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
191-376
               

               
Cow position:
               
chr22:14139931-14140118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
191-454
               

               
Cow position:
               
chr22:39446237-39446503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
194-438
               

               
Cow position:
               
chr22:23676017-23675781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
194-439
               

               
Cow position:
               
chr22:8539837-8540068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
195-454
               

               
Cow position:
               
chr22:7497162-7496900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
195-455
               

               
Cow position:
               
chr22:32514239-32514503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 239
               

               
Conread position:
               
197-456
               

               
Cow position:
               
chr22:16235554-16235291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
198-442
               

               
Cow position:
               
chr22:12188528-12188278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
198-442
               

               
Cow position:
               
chr22:12195615-12195364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
202-441
               

               
Cow position:
               
chr22:12902892-12902661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
202-442
               

               
Cow position:
               
chr22:33985844-33985611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
202-451
               

               
Cow position:
               
chr22:2632798-2633053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
203-439
               

               
Cow position:
               
chr22:28568755-28568994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
203-442
               

               
Cow position:
               
chr22:23372908-23372663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
203-442
               

               
Cow position:
               
chr22:24134366-24134127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
204-438
               

               
Cow position:
               
chr22:26056907-26056675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
209-430
               

               
Cow position:
               
chr22:3470249-3470473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
209-438
               

               
Cow position:
               
chr22:14141381-14141149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
210-451
               

               
Cow position:
               
chr22:24055351-24055594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
212-431
               

               
Cow position:
               
chr22:22433008-22433231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
212-437
               

               
Cow position:
               
chr22:4163945-4164170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr22:4054623-4054407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr22:7362011-7361779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr22:10557245-10557467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
212-455
               

               
Cow position:
               
chr22:14600368-14600126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
213-455
               

               
Cow position:
               
chr22:36193801-36194041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
214-439
               

               
Cow position:
               
chr22:14676653-14676881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
216-392
               

               
Cow position:
               
chr22:23398434-23398260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
216-428
               

               
Cow position:
               
chr22:30643164-30642951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr22:16724717-16724497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr22:16806565-16806779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-442
               

               
Cow position:
               
chr22:4657073-4656850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-442
               

               
Cow position:
               
chr22:47562673-47562907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr22:6289533-6289300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-448
               

               
Cow position:
               
chr22:4156847-4156614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-448
               

               
Cow position:
               
chr22:42230552-42230319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr22:26803788-26804032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
217-378
               

               
Cow position:
               
chr22:24032244-24032082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
217-445
               

               
Cow position:
               
chr22:35215519-35215750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
217-448
               

               
Cow position:
               
chr22:18967187-18966959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
218-439
               

               
Cow position:
               
chr22:17198110-17198331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
218-442
               

               
Cow position:
               
chr22:23265680-23265451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr22:14187286-14187531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
219-442
               

               
Cow position:
               
chr22:11352479-11352250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
219-445
               

               
Cow position:
               
chr22:1776032-1776262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
220-442
               

               
Cow position:
               
chr22:1714891-1714666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
220-442
               

               
Cow position:
               
chr22:28937958-28937746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr22:3937027-3937272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
221-430
               

               
Cow position:
               
chr22:2643905-2644117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
221-434
               

               
Cow position:
               
chr22:977131-976909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
221-442
               

               
Cow position:
               
chr22:31209560-31209786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
221-454
               

               
Cow position:
               
chr22:4735998-4736234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
221-455
               

               
Cow position:
               
chr22:26112341-26112577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
221-456
               

               
Cow position:
               
chr22:43596362-43596116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
225-374
               

               
Cow position:
               
chr22:10323859-10324008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
225-442
               

               
Cow position:
               
chr22:21905451-21905664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
225-443
               

               
Cow position:
               
chr22:24542341-24542561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
226-372
               

               
Cow position:
               
chr22:43495914-43496061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
226-456
               

               
Cow position:
               
chr22:16840817-16840585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
227-442
               

               
Cow position:
               
chr22:2876818-2876602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
229-450
               

               
Cow position:
               
chr22:33948990-33948772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
230-442
               

               
Cow position:
               
chr22:8446899-8447103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
230-443
               

               
Cow position:
               
chr22:26267834-26268047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
230-448
               

               
Cow position:
               
chr22:16339837-16340057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
230-456
               

               
Cow position:
               
chr22:14487919-14488149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
231-436
               

               
Cow position:
               
chr22:26233616-26233823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
233-442
               

               
Cow position:
               
chr22:16813785-16813991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
235-438
               

               
Cow position:
               
chr22:7584248-7584051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
236-370
               

               
Cow position:
               
chr22:22606214-22606350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
238-438
               

               
Cow position:
               
chr22:1523209-1523414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr22:9279018-9279217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr22:26417274-26417476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
238-448
               

               
Cow position:
               
chr22:1065096-1065309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
238-456
               

               
Cow position:
               
chr22:1821594-1821379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 144
               

               
Conread position:
               
238-456
               

               
Cow position:
               
chr22:24071656-24071447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
239-438
               

               
Cow position:
               
chr22:28493286-28493089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
239-439
               

               
Cow position:
               
chr22:14641865-14641663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
239-441
               

               
Cow position:
               
chr22:11189023-11189225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr22:16346388-16346589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
239-455
               

               
Cow position:
               
chr22:35902429-35902212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
239-456
               

               
Cow position:
               
chr22:19414045-19413824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
240-429
               

               
Cow position:
               
chr22:8330991-8331183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 189
               

               
Conread position:
               
240-442
               

               
Cow position:
               
chr22:8327739-8327937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
240-448
               

               
Cow position:
               
chr22:4628546-4628764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
241-438
               

               
Cow position:
               
chr22:14643829-14644025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 122
               

               
Conread position:
               
242-452
               

               
Cow position:
               
chr22:6360189-6359987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
244-385
               

               
Cow position:
               
chr22:12914611-12914752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
245-454
               

               
Cow position:
               
chr22:3730675-3730465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr22:43572941-43573159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
248-450
               

               
Cow position:
               
chr22:23630350-23630152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr22:5375395-5375604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr22:33373242-33373453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
249-430
               

               
Cow position:
               
chr22:6793872-6793696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr22:1304552-1304359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr22:6106374-6106175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr22:12777375-12777188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
249-445
               

               
Cow position:
               
chr22:23780566-23780374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
249-445
               

               
Cow position:
               
chr22:26188872-26189071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
249-450
               

               
Cow position:
               
chr22:35578775-35578572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
250-456
               

               
Cow position:
               
chr22:7518558-7518764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
251-389
               

               
Cow position:
               
chr22:9347043-9346906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
251-442
               

               
Cow position:
               
chr22:2704300-2704495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr22:5921967-5921797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr22:35403713-35403907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr22:35533227-35533027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr22:16866036-16866249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 205
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr22:20034834-20035030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
253-430
               

               
Cow position:
               
chr22:20166857-20166677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
253-438
               

               
Cow position:
               
chr22:44684493-44684667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
253-438
               

               
Cow position:
               
chr22:45104265-45104073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
253-456
               

               
Cow position:
               
chr22:30687032-30687227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr22:10350965-10351161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr22:12673328-12673123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 197
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr22:45772017-45771814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
255-441
               

               
Cow position:
               
chr22:41025764-41025953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
258-442
               

               
Cow position:
               
chr22:45684028-45683838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
258-456
               

               
Cow position:
               
chr22:26140687-26140886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
259-456
               

               
Cow position:
               
chr22:25811937-25811722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr22:8357599-8357788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr22:14602159-14601966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr22:18442736-18442536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 192
               

               
Conread position:
               
262-436
               

               
Cow position:
               
chr22:16129152-16129329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
262-438
               

               
Cow position:
               
chr22:3541103-3540928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
262-442
               

               
Cow position:
               
chr22:29219890-29219706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
262-443
               

               
Cow position:
               
chr22:1830063-1830240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
262-445
               

               
Cow position:
               
chr22:27401752-27401932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
262-445
               

               
Cow position:
               
chr22:30615745-30615930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
262-445
               

               
Cow position:
               
chr22:36209268-36209455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
262-448
               

               
Cow position:
               
chr22:43238879-43238691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
262-454
               

               
Cow position:
               
chr22:23209579-23209774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
262-455
               

               
Cow position:
               
chr22:1991614-1991811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr22:2036022-2036217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr22:45788625-45788817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
263-442
               

               
Cow position:
               
chr22:9735285-9735464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
263-450
               

               
Cow position:
               
chr22:10468527-10468713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
264-430
               

               
Cow position:
               
chr22:1819519-1819347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
264-454
               

               
Cow position:
               
chr22:25312526-25312723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
265-440
               

               
Cow position:
               
chr22:6202966-6203145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
268-450
               

               
Cow position:
               
chr22:24890242-24890424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
269-442
               

               
Cow position:
               
chr22:39472136-39471959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
269-456
               

               
Cow position:
               
chr22:12854083-12853890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr22:9325862-9326052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
273-442
               

               
Cow position:
               
chr22:1728257-1728428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
274-456
               

               
Cow position:
               
chr22:5779056-5778868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
276-438
               

               
Cow position:
               
chr22:2438948-2438783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
278-439
               

               
Cow position:
               
chr22:30176748-30176913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-442
               

               
Cow position:
               
chr22:11837033-11836878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
278-442
               

               
Cow position:
               
chr22:13930311-13930476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
278-442
               

               
Cow position:
               
chr22:43131113-43130945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-442
               

               
Cow position:
               
chr22:43730316-43730478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
278-449
               

               
Cow position:
               
chr22:1074295-1074470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
279-429
               

               
Cow position:
               
chr22:14432539-14432383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
279-437
               

               
Cow position:
               
chr22:1551933-1552086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
279-441
               

               
Cow position:
               
chr22:11497526-11497692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr22:1046160-1045992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr22:1105592-1105432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr22:10594640-10594806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
279-451
               

               
Cow position:
               
chr22:16564180-16564350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
279-452
               

               
Cow position:
               
chr22:18145568-18145742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
279-455
               

               
Cow position:
               
chr22:36762070-36762248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
279-456
               

               
Cow position:
               
chr22:4632299-4632479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
280-448
               

               
Cow position:
               
chr22:12637633-12637803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
280-453
               

               
Cow position:
               
chr22:35627381-35627557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
280-455
               

               
Cow position:
               
chr22:47820471-47820647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
280-456
               

               
Cow position:
               
chr22:3257629-3257459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
280-456
               

               
Cow position:
               
chr22:37702011-37702184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
281-454
               

               
Cow position:
               
chr22:9075441-9075619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
281-454
               

               
Cow position:
               
chr22:30684762-30684932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
283-430
               

               
Cow position:
               
chr22:11269861-11269715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
283-442
               

               
Cow position:
               
chr22:24557490-24557328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
285-442
               

               
Cow position:
               
chr22:12741234-12741086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
285-454
               

               
Cow position:
               
chr22:11790021-11790193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr22:18403283-18403457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr22:33030836-33031018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
287-445
               

               
Cow position:
               
chr22:16140564-16140723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
287-454
               

               
Cow position:
               
chr22:1973781-1973611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
287-455
               

               
Cow position:
               
chr22:7415014-7414839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr22:19305938-19306111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
288-440
               

               
Cow position:
               
chr22:30583695-30583851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
288-441
               

               
Cow position:
               
chr22:23762810-23762657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
289-440
               

               
Cow position:
               
chr22:16639346-16639502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
289-456
               

               
Cow position:
               
chr22:16275110-16274942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
292-442
               

               
Cow position:
               
chr22:13891623-13891771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
292-454
               

               
Cow position:
               
chr22:21042100-21041948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
293-437
               

               
Cow position:
               
chr22:21499798-21499653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
293-456
               

               
Cow position:
               
chr22:4718155-4718315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
297-430
               

               
Cow position:
               
chr22:31790931-31790792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
298-427
               

               
Cow position:
               
chr22:18441133-18441265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
298-442
               

               
Cow position:
               
chr22:4084008-4083861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr22:2702672-2702834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
300-442
               

               
Cow position:
               
chr22:30293742-30293886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
300-455
               

               
Cow position:
               
chr22:9983774-9983616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
300-455
               

               
Cow position:
               
chr22:26775554-26775713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
300-456
               

               
Cow position:
               
chr22:44018205-44018042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
302-445
               

               
Cow position:
               
chr22:28690433-28690576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
303-456
               

               
Cow position:
               
chr22:29546696-29546846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
304-456
               

               
Cow position:
               
chr22:672211-672055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr22:36574546-36574395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-442
               

               
Cow position:
               
chr22:3061012-3061147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
309-456
               

               
Cow position:
               
chr22:27084338-27084187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
310-442
               

               
Cow position:
               
chr22:31409301-31409436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
310-456
               

               
Cow position:
               
chr22:30074710-30074562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
320-449
               

               
Cow position:
               
chr22:6204351-6204219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
320-455
               

               
Cow position:
               
chr22:5644353-5644216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
321-442
               

               
Cow position:
               
chr22:17948297-17948173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
328-454
               

               
Cow position:
               
chr22:15050434-15050563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
330-456
               

               
Cow position:
               
chr22:28290424-28290552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
338-456
               

               
Cow position:
               
chr22:17107644-17107764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               
Show alignments to all cow chromosomes.