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Cow genome map

           
Conread name:
           
Ss1.1-uFN-UNL-P-FN-bb-g-10-0-UNL.s1.3
        

               
Conread position:
               
72-336
               

               
Cow position:
               
chr3:80468880-80468609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
82-437
               

               
Cow position:
               
chr3:7661666-7662027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
83-454
               

               
Cow position:
               
chr3:17058726-17058360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
87-256
               

               
Cow position:
               
chr3:61024478-61024313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr3:81359287-81359055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
87-430
               

               
Cow position:
               
chr3:66900916-66900564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
87-437
               

               
Cow position:
               
chr3:73837897-73837548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
87-441
               

               
Cow position:
               
chr3:20802804-20802466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
87-456
               

               
Cow position:
               
chr3:45211123-45211495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
87-456
               

               
Cow position:
               
chr3:79271901-79271519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr3:24935194-24935466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
97-360
               

               
Cow position:
               
chr3:42423509-42423234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
97-456
               

               
Cow position:
               
chr3:81087794-81087448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
98-244
               

               
Cow position:
               
chr3:27212189-27212340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
98-335
               

               
Cow position:
               
chr3:26553889-26553647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
98-442
               

               
Cow position:
               
chr3:23408524-23408189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr3:7331286-7330950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr3:29813074-29813414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr3:42177986-42178182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr3:56547-56298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr3:56678520-56678191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
100-442
               

               
Cow position:
               
chr3:2025012-2025378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
100-454
               

               
Cow position:
               
chr3:38828598-38828937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
100-454
               

               
Cow position:
               
chr3:76713495-76713125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 175
               

               
Conread position:
               
101-441
               

               
Cow position:
               
chr3:51033206-51033546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
102-355
               

               
Cow position:
               
chr3:74846875-74846620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
102-397
               

               
Cow position:
               
chr3:73460802-73461095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
102-440
               

               
Cow position:
               
chr3:10958409-10958071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
102-442
               

               
Cow position:
               
chr3:22221152-22221501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
102-445
               

               
Cow position:
               
chr3:21112812-21112464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
103-360
               

               
Cow position:
               
chr3:13577352-13577109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
105-346
               

               
Cow position:
               
chr3:72675928-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
105-396
               

               
Cow position:
               
chr3:84175989-84175693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
43, 148
               

               
Conread position:
               
106-256
               

               
Cow position:
               
chr3:49731807-49731651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
106-358
               

               
Cow position:
               
chr3:37599582-37599336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
106-360
               

               
Cow position:
               
chr3:55272211-55271951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
106-362
               

               
Cow position:
               
chr3:26960754-26960492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
106-431
               

               
Cow position:
               
chr3:57577532-57577860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
106-438
               

               
Cow position:
               
chr3:23471630-23471292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
106-438
               

               
Cow position:
               
chr3:53150163-53150504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
106-439
               

               
Cow position:
               
chr3:48241453-48241778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
106-439
               

               
Cow position:
               
chr3:59034870-59035215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
106-440
               

               
Cow position:
               
chr3:59597019-59597346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 109
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr3:2648677-2648333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr3:26065837-26066162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr3:83442045-83441718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
106-443
               

               
Cow position:
               
chr3:2674863-2675208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr3:7337933-7337597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr3:17134174-17134520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr3:26981901-26982238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr3:53739349-53738993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr3:63269059-63269420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr3:75080607-75080941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
107-442
               

               
Cow position:
               
chr3:19585699-19586039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
108-377
               

               
Cow position:
               
chr3:20993650-20993926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
108-446
               

               
Cow position:
               
chr3:77581947-77582286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
109-256
               

               
Cow position:
               
chr3:57554010-57553860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
109-371
               

               
Cow position:
               
chr3:61143940-61144199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
109-428
               

               
Cow position:
               
chr3:56612199-56612523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
109-429
               

               
Cow position:
               
chr3:74119602-74119268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 254
               

               
Conread position:
               
109-430
               

               
Cow position:
               
chr3:19793753-19793427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
109-442
               

               
Cow position:
               
chr3:38035752-38035413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
109-442
               

               
Cow position:
               
chr3:55733781-55734133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
109-445
               

               
Cow position:
               
chr3:59718682-59719028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
109-455
               

               
Cow position:
               
chr3:46341304-46341670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
109-456
               

               
Cow position:
               
chr3:78443719-78443382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
110-359
               

               
Cow position:
               
chr3:49650226-49650481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
110-365
               

               
Cow position:
               
chr3:79292670-79292926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
110-366
               

               
Cow position:
               
chr3:116038-116290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
110-415
               

               
Cow position:
               
chr3:74134546-74134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
110-431
               

               
Cow position:
               
chr3:59000907-59000599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
110-437
               

               
Cow position:
               
chr3:55124437-55124115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr3:61169641-61169981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
110-449
               

               
Cow position:
               
chr3:2393124-2392787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
110-449
               

               
Cow position:
               
chr3:15153533-15153871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
110-453
               

               
Cow position:
               
chr3:57764068-57764400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
111-236
               

               
Cow position:
               
chr3:18056285-18056414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
111-389
               

               
Cow position:
               
chr3:77271431-77271158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
111-389
               

               
Cow position:
               
chr3:79645602-79645307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
111-422
               

               
Cow position:
               
chr3:15388057-15388374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
111-438
               

               
Cow position:
               
chr3:68146001-68145684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
111-440
               

               
Cow position:
               
chr3:39066178-39066502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr3:12705704-12705373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
111-442
               

               
Cow position:
               
chr3:19900511-19900831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
111-442
               

               
Cow position:
               
chr3:56582685-56583023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
111-442
               

               
Cow position:
               
chr3:78945991-78945646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
111-452
               

               
Cow position:
               
chr3:65236865-65237208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
111-455
               

               
Cow position:
               
chr3:80973199-80973538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr3:39970026-39969674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr3:72473753-72474111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
112-430
               

               
Cow position:
               
chr3:69416941-69416615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
112-436
               

               
Cow position:
               
chr3:29891570-29891237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
112-442
               

               
Cow position:
               
chr3:17235363-17235029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
112-455
               

               
Cow position:
               
chr3:71478434-71478779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr3:14725144-14725505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr3:23920587-23920237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr3:70676066-70676420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
113-428
               

               
Cow position:
               
chr3:24549003-24548673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
114-294
               

               
Cow position:
               
chr3:39328239-39328426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
114-366
               

               
Cow position:
               
chr3:38691563-38691308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
114-389
               

               
Cow position:
               
chr3:28898378-28898099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
114-448
               

               
Cow position:
               
chr3:32584998-32585335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
114-456
               

               
Cow position:
               
chr3:81039901-81039558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
115-238
               

               
Cow position:
               
chr3:59317622-59317498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
115-244
               

               
Cow position:
               
chr3:27247344-27247213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
115-270
               

               
Cow position:
               
chr3:48578682-48578844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
115-271
               

               
Cow position:
               
chr3:84000458-84000616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
115-273
               

               
Cow position:
               
chr3:15859821-15859661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
115-275
               

               
Cow position:
               
chr3:49218468-49218307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
115-279
               

               
Cow position:
               
chr3:59514951-59515115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
115-296
               

               
Cow position:
               
chr3:35005626-35005804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
115-297
               

               
Cow position:
               
chr3:15992560-15992747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
115-306
               

               
Cow position:
               
chr3:32184175-32183979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
115-307
               

               
Cow position:
               
chr3:22820414-22820611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
115-309
               

               
Cow position:
               
chr3:65800441-65800627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
115-312
               

               
Cow position:
               
chr3:73759670-73759472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
115-320
               

               
Cow position:
               
chr3:31047105-31046899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
115-324
               

               
Cow position:
               
chr3:66609997-66609787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr3:34937689-34937902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr3:74878746-74878530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
115-330
               

               
Cow position:
               
chr3:75711157-75711369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
115-338
               

               
Cow position:
               
chr3:20437804-20437585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
115-345
               

               
Cow position:
               
chr3:58969055-58968824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
115-346
               

               
Cow position:
               
chr3:71430362-71430125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
115-347
               

               
Cow position:
               
chr3:19404162-19404379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-349
               

               
Cow position:
               
chr3:74502476-74502242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
115-352
               

               
Cow position:
               
chr3:34669882-34669647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
115-352
               

               
Cow position:
               
chr3:59101674-59101913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
115-358
               

               
Cow position:
               
chr3:67744777-67744536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr3:8393782-8394036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr3:26219204-26218960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr3:58973149-58973388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
115-361
               

               
Cow position:
               
chr3:83815943-83815693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
115-366
               

               
Cow position:
               
chr3:39171637-39171390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
115-368
               

               
Cow position:
               
chr3:66884095-66883841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr3:2680362-2680618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr3:5100921-5100667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr3:46901042-46901303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr3:53113019-53113280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr3:70401748-70402001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
115-372
               

               
Cow position:
               
chr3:67704388-67704652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr3:55835979-55835709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
115-377
               

               
Cow position:
               
chr3:56059652-56059918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr3:13507312-13507580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr3:17935088-17934829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr3:52863339-52863071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 105
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr3:67544023-67543758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr3:70899741-70900002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
115-379
               

               
Cow position:
               
chr3:53508467-53508724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
115-381
               

               
Cow position:
               
chr3:26874435-26874706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
115-381
               

               
Cow position:
               
chr3:49790965-49790695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
115-387
               

               
Cow position:
               
chr3:30222031-30222314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr3:82461023-82461296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
115-395
               

               
Cow position:
               
chr3:45647978-45648260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
115-397
               

               
Cow position:
               
chr3:15752785-15752506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-408
               

               
Cow position:
               
chr3:70565892-70565595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
115-413
               

               
Cow position:
               
chr3:44101815-44102113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
115-417
               

               
Cow position:
               
chr3:25944927-25945245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
115-419
               

               
Cow position:
               
chr3:18184916-18185229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
115-419
               

               
Cow position:
               
chr3:83727401-83727097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
115-429
               

               
Cow position:
               
chr3:7566574-7566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
115-430
               

               
Cow position:
               
chr3:53046813-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
115-430
               

               
Cow position:
               
chr3:74079793-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
115-434
               

               
Cow position:
               
chr3:17222298-17221966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
115-434
               

               
Cow position:
               
chr3:38863961-38864285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 139
               

               
Conread position:
               
115-436
               

               
Cow position:
               
chr3:58540683-58540348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr3:45647526-45647836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr3:63179706-63180034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr3:8060973-8061291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr3:24615991-24615671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr3:54434821-54435139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr3:60597388-60597708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr3:64010971-64010637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
115-438
               

               
Cow position:
               
chr3:73764350-73764044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr3:30463320-30463004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr3:14598796-14599093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr3:52608033-52608354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr3:54506555-54506879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr3:64281086-64280765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr3:71238002-71238322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
115-440
               

               
Cow position:
               
chr3:79094202-79093888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 184
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr3:4319560-4319893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr3:49327787-49328108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr3:65413434-65413092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
115-441
               

               
Cow position:
               
chr3:68156584-68156901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:188706-189050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:2506631-2506301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:5374180-5374484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:13353207-13353539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:14633138-14632805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:15751876-15751548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:17695157-17694827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:17936989-17936672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:17957308-17957636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:18686753-18687076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:23105520-23105190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:26739574-26739249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:30940661-30940980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:36418620-36418312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:42671385-42671708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:45667507-45667168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:45881755-45882074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:52652229-52651905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:53095090-53094749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:53588541-53588213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:53790691-53790367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:53875913-53875587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:54374014-54373682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:54782171-54781818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:54903418-54903742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:55712275-55712606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 261
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:57754634-57754300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:58765231-58764911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:58960743-58960418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:59392260-59391950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:61224896-61224574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:61857346-61857683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 174
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:62046508-62046846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:65058548-65058874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:67930336-67929995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:69750855-69750560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:70609472-70609800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 177
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:71231241-71231573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:75107640-75107947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:75570602-75570271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:76138325-76138634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr3:77365453-77365117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
115-443
               

               
Cow position:
               
chr3:44932358-44932688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr3:18393542-18393222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr3:33253035-33252714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr3:56476526-56476852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr3:68648010-68648355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr3:73394966-73395293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
115-447
               

               
Cow position:
               
chr3:29360294-29359984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr3:27697133-27696783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr3:29946240-29946567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr3:53384438-53384098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr3:74088324-74087996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
115-449
               

               
Cow position:
               
chr3:74600957-74601292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
115-450
               

               
Cow position:
               
chr3:3556395-3556731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
115-450
               

               
Cow position:
               
chr3:22676245-22675924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
115-450
               

               
Cow position:
               
chr3:80564809-80565145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:14801594-14801928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:16547525-16547854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:19198833-19199171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:53592851-53592502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:67929418-67929075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:69144551-69144880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr3:79592039-79591715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
115-453
               

               
Cow position:
               
chr3:14552724-14553059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr3:7763511-7763845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr3:18066981-18067319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr3:31309509-31309167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr3:35153467-35153792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr3:48810791-48810450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
115-454
               

               
Cow position:
               
chr3:75687593-75687251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:14465861-14465526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:49119181-49118843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:50768528-50768866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:53318249-53318597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:55319057-55318710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:55970351-55970703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:59649100-59649440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:68708158-68707836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:68881266-68880945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr3:75158205-75158542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:210162-210511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:1830723-1830385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:3913605-3913251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:9641411-9641744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:9663326-9662981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:19792738-19793087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 214
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:22232806-22232480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:24468533-24468196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:26903961-26904288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:27274377-27274715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:30179926-30180272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 262
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:53270674-53271020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:54945974-54946309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:68586867-68587208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:76922817-76922484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:77188283-77188627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:79825070-79824730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
115-456
               

               
Cow position:
               
chr3:79902349-79902686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
116-266
               

               
Cow position:
               
chr3:15231875-15232029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
116-267
               

               
Cow position:
               
chr3:29807312-29807466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
116-341
               

               
Cow position:
               
chr3:3638033-3638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
116-358
               

               
Cow position:
               
chr3:62826772-62826527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
116-359
               

               
Cow position:
               
chr3:34270769-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
116-375
               

               
Cow position:
               
chr3:57760345-57760607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
116-378
               

               
Cow position:
               
chr3:3738335-3738593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
116-381
               

               
Cow position:
               
chr3:80581510-80581774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
116-435
               

               
Cow position:
               
chr3:51234250-51233936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 131
               

               
Conread position:
               
116-440
               

               
Cow position:
               
chr3:3032251-3032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
116-441
               

               
Cow position:
               
chr3:16333647-16333979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr3:15158888-15159204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr3:48252730-48253054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr3:54050172-54049854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr3:59473967-59474295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr3:73467469-73467801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr3:78077040-78077365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr3:20257051-20257401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
116-456
               

               
Cow position:
               
chr3:2518686-2518352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
116-456
               

               
Cow position:
               
chr3:16752406-16752064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
116-456
               

               
Cow position:
               
chr3:24872562-24872884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
116-456
               

               
Cow position:
               
chr3:26489238-26488888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
116-456
               

               
Cow position:
               
chr3:79220697-79221042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
117-293
               

               
Cow position:
               
chr3:81277851-81277673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
117-340
               

               
Cow position:
               
chr3:7940708-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
117-346
               

               
Cow position:
               
chr3:61840125-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
117-352
               

               
Cow position:
               
chr3:26920756-26920996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
117-353
               

               
Cow position:
               
chr3:17895694-17895935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr3:525198-525434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr3:2198730-2198970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
117-362
               

               
Cow position:
               
chr3:2216211-2216464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
117-368
               

               
Cow position:
               
chr3:59884225-59883966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr3:73443239-73442987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr3:74242843-74243101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
117-383
               

               
Cow position:
               
chr3:50614485-50614758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
117-389
               

               
Cow position:
               
chr3:73708896-73709167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
117-392
               

               
Cow position:
               
chr3:12712071-12711788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
117-405
               

               
Cow position:
               
chr3:75046030-75045735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
117-433
               

               
Cow position:
               
chr3:57273914-57274224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
117-438
               

               
Cow position:
               
chr3:15052104-15051781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
117-438
               

               
Cow position:
               
chr3:54100874-54100542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
117-441
               

               
Cow position:
               
chr3:25477664-25477966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:13302001-13301673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:14601865-14601537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:28908354-28908041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:48073026-48072711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:49461085-49460751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:51578472-51578149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:55177905-55177576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:70334117-70333794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:70762275-70761948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:76268134-76267798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:79092547-79092209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr3:80740416-80740728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
117-443
               

               
Cow position:
               
chr3:75479850-75480174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
117-445
               

               
Cow position:
               
chr3:78092658-78092333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
117-453
               

               
Cow position:
               
chr3:59610873-59610532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
117-455
               

               
Cow position:
               
chr3:53221862-53222199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
117-455
               

               
Cow position:
               
chr3:55189908-55189563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr3:23876842-23877183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr3:55819595-55819937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 205
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr3:63315983-63316316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr3:67698127-67698468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr3:75853483-75853146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
118-426
               

               
Cow position:
               
chr3:68627832-68627528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
118-435
               

               
Cow position:
               
chr3:12978768-12978447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
118-448
               

               
Cow position:
               
chr3:46006178-46005833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr3:3985177-3985492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
120-266
               

               
Cow position:
               
chr3:28323036-28323176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
120-431
               

               
Cow position:
               
chr3:79196610-79196927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
120-432
               

               
Cow position:
               
chr3:55434178-55434496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
120-436
               

               
Cow position:
               
chr3:49678976-49679303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
120-454
               

               
Cow position:
               
chr3:18459671-18459349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
121-378
               

               
Cow position:
               
chr3:53240118-53240369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
121-389
               

               
Cow position:
               
chr3:61323185-61323454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
121-448
               

               
Cow position:
               
chr3:43233359-43233684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
122-382
               

               
Cow position:
               
chr3:5366623-5366884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
122-456
               

               
Cow position:
               
chr3:83474598-83474942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
123-382
               

               
Cow position:
               
chr3:84243915-84243654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
123-441
               

               
Cow position:
               
chr3:3883965-3883646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
123-442
               

               
Cow position:
               
chr3:37041272-37041591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
123-442
               

               
Cow position:
               
chr3:48362938-48363244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
123-442
               

               
Cow position:
               
chr3:48900483-48900155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
124-442
               

               
Cow position:
               
chr3:60264860-60264547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
124-453
               

               
Cow position:
               
chr3:58527257-58527563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
175, 24
               

               
Conread position:
               
124-456
               

               
Cow position:
               
chr3:15954232-15953893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
126-371
               

               
Cow position:
               
chr3:1785385-1785139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
126-384
               

               
Cow position:
               
chr3:61116997-61116735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
127-355
               

               
Cow position:
               
chr3:55085318-55085081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
127-368
               

               
Cow position:
               
chr3:32457059-32457295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
127-455
               

               
Cow position:
               
chr3:71497283-71496941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
128-256
               

               
Cow position:
               
chr3:27544472-27544346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
128-347
               

               
Cow position:
               
chr3:5097066-5097288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
128-356
               

               
Cow position:
               
chr3:11711821-11712055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
128-359
               

               
Cow position:
               
chr3:4050054-4050286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr3:57624325-57624566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr3:80053679-80053442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
128-374
               

               
Cow position:
               
chr3:43726937-43727179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
128-377
               

               
Cow position:
               
chr3:14263254-14263503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr3:49382812-49383060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr3:59621785-59621536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
128-413
               

               
Cow position:
               
chr3:72390945-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
128-430
               

               
Cow position:
               
chr3:73820510-73820202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
128-433
               

               
Cow position:
               
chr3:47417706-47417405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
128-437
               

               
Cow position:
               
chr3:71238333-71238646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
128-437
               

               
Cow position:
               
chr3:74500098-74500427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
128-438
               

               
Cow position:
               
chr3:3889707-3889406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
128-440
               

               
Cow position:
               
chr3:78093524-78093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr3:1517654-1517338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr3:5365537-5365840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr3:15443870-15443551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr3:17331586-17331894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr3:18426840-18426525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
128-442
               

               
Cow position:
               
chr3:65969021-65969349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
128-448
               

               
Cow position:
               
chr3:13890335-13890665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
128-449
               

               
Cow position:
               
chr3:62999137-62998812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
128-451
               

               
Cow position:
               
chr3:83797975-83797639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
128-452
               

               
Cow position:
               
chr3:83215119-83215456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
128-454
               

               
Cow position:
               
chr3:75050759-75050437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr3:34871428-34871757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
129-381
               

               
Cow position:
               
chr3:55010297-55010051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
129-442
               

               
Cow position:
               
chr3:21081513-21081205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
129-442
               

               
Cow position:
               
chr3:60389628-60389928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
129-442
               

               
Cow position:
               
chr3:76155846-76156161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
129-456
               

               
Cow position:
               
chr3:15228958-15228654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
129-456
               

               
Cow position:
               
chr3:49482846-49482525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
130-297
               

               
Cow position:
               
chr3:33698591-33698760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
130-389
               

               
Cow position:
               
chr3:6689863-6690123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
130-389
               

               
Cow position:
               
chr3:53572888-53572629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr3:11200119-11199801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr3:64526710-64527021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
130-442
               

               
Cow position:
               
chr3:67520310-67520001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
130-445
               

               
Cow position:
               
chr3:59040429-59040748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
130-448
               

               
Cow position:
               
chr3:61539665-61539980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
130-451
               

               
Cow position:
               
chr3:30009045-30008722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
130-453
               

               
Cow position:
               
chr3:11254297-11253979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
130-454
               

               
Cow position:
               
chr3:36375680-36375349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr3:54551862-54551521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr3:83490948-83491270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
131-428
               

               
Cow position:
               
chr3:70334832-70334531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
131-440
               

               
Cow position:
               
chr3:13380424-13380105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 251
               

               
Conread position:
               
131-451
               

               
Cow position:
               
chr3:30026239-30026558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
132-257
               

               
Cow position:
               
chr3:30701170-30701299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
132-389
               

               
Cow position:
               
chr3:38783480-38783728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
133-453
               

               
Cow position:
               
chr3:72342109-72342434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
134-442
               

               
Cow position:
               
chr3:79884615-79884305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
134-453
               

               
Cow position:
               
chr3:51402778-51403082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr3:52017635-52017867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
135-454
               

               
Cow position:
               
chr3:22889148-22888826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
136-379
               

               
Cow position:
               
chr3:22509894-22510136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
136-456
               

               
Cow position:
               
chr3:30266829-30266506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
137-455
               

               
Cow position:
               
chr3:73237063-73237373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
138-433
               

               
Cow position:
               
chr3:73961824-73961528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
139-442
               

               
Cow position:
               
chr3:15672284-15671978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
139-454
               

               
Cow position:
               
chr3:42796638-42796331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
139-456
               

               
Cow position:
               
chr3:35056108-35055786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
140-456
               

               
Cow position:
               
chr3:14194307-14194000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
141-456
               

               
Cow position:
               
chr3:31225312-31225610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
144-456
               

               
Cow position:
               
chr3:36160311-36160011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
145-439
               

               
Cow position:
               
chr3:64196703-64196997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
148-368
               

               
Cow position:
               
chr3:35621185-35621404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
148-377
               

               
Cow position:
               
chr3:61278798-61279019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
148-378
               

               
Cow position:
               
chr3:10103930-10104150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
148-436
               

               
Cow position:
               
chr3:73298969-73299234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 60
               

               
Conread position:
               
148-438
               

               
Cow position:
               
chr3:54740006-54739729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
148-439
               

               
Cow position:
               
chr3:21015078-21014784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
148-442
               

               
Cow position:
               
chr3:3649335-3649064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
148-442
               

               
Cow position:
               
chr3:22668297-22668587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
148-442
               

               
Cow position:
               
chr3:58134805-58134509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
148-442
               

               
Cow position:
               
chr3:58318071-58317768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
148-455
               

               
Cow position:
               
chr3:3656393-3656704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr3:26992449-26992762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr3:48468065-48468365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
149-368
               

               
Cow position:
               
chr3:63177362-63177586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
149-445
               

               
Cow position:
               
chr3:15951028-15950739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 63
               

               
Conread position:
               
149-456
               

               
Cow position:
               
chr3:59604734-59605028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
149-456
               

               
Cow position:
               
chr3:66631471-66631154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
150-329
               

               
Cow position:
               
chr3:12670729-12670553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
150-456
               

               
Cow position:
               
chr3:4268698-4268386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr3:72504012-72503796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr3:84157562-84157320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
152-442
               

               
Cow position:
               
chr3:45700693-45700977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
152-445
               

               
Cow position:
               
chr3:83787323-83787620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
152-448
               

               
Cow position:
               
chr3:55094348-55094050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
152-451
               

               
Cow position:
               
chr3:6403308-6403605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr3:5696843-5696540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr3:18179832-18180152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr3:18059590-18059879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
154-445
               

               
Cow position:
               
chr3:21867149-21866860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
157-378
               

               
Cow position:
               
chr3:55983986-55984210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
157-442
               

               
Cow position:
               
chr3:57704214-57704507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
157-456
               

               
Cow position:
               
chr3:65019974-65019662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
158-436
               

               
Cow position:
               
chr3:9116920-9117203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
158-438
               

               
Cow position:
               
chr3:1036918-1037199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
159-342
               

               
Cow position:
               
chr3:27545928-27545744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
159-438
               

               
Cow position:
               
chr3:31361312-31361594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
159-440
               

               
Cow position:
               
chr3:83988425-83988707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
159-456
               

               
Cow position:
               
chr3:10841708-10842004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
160-442
               

               
Cow position:
               
chr3:3316918-3316633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
160-456
               

               
Cow position:
               
chr3:22165523-22165225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
162-436
               

               
Cow position:
               
chr3:75238354-75238630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
168-456
               

               
Cow position:
               
chr3:47753126-47753425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
169-345
               

               
Cow position:
               
chr3:3471941-3472119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
169-451
               

               
Cow position:
               
chr3:32310516-32310229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
169-456
               

               
Cow position:
               
chr3:79813509-79813807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
170-441
               

               
Cow position:
               
chr3:39996984-39996720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr3:75778157-75777894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
170-456
               

               
Cow position:
               
chr3:53429009-53428729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
171-451
               

               
Cow position:
               
chr3:5707309-5707026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
171-456
               

               
Cow position:
               
chr3:49363020-49363297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
178-377
               

               
Cow position:
               
chr3:74900726-74900532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
178-438
               

               
Cow position:
               
chr3:31350193-31349938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
178-441
               

               
Cow position:
               
chr3:23804429-23804676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
178-443
               

               
Cow position:
               
chr3:48459420-48459153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
179-425
               

               
Cow position:
               
chr3:11640641-11640894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
179-456
               

               
Cow position:
               
chr3:23203322-23203041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
179-456
               

               
Cow position:
               
chr3:51609273-51608993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
180-440
               

               
Cow position:
               
chr3:10591604-10591340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
180-442
               

               
Cow position:
               
chr3:53704052-53703772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr3:19682607-19682881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
184-430
               

               
Cow position:
               
chr3:40145385-40145630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr3:14546924-14547170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
189-456
               

               
Cow position:
               
chr3:27976603-27976333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
190-366
               

               
Cow position:
               
chr3:23667547-23667720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
190-447
               

               
Cow position:
               
chr3:3275521-3275775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
191-437
               

               
Cow position:
               
chr3:10668954-10668709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
191-442
               

               
Cow position:
               
chr3:7581791-7581543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
193-445
               

               
Cow position:
               
chr3:8182024-8181771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
194-455
               

               
Cow position:
               
chr3:35074811-35075060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
195-438
               

               
Cow position:
               
chr3:39248093-39247861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
196-438
               

               
Cow position:
               
chr3:81234317-81234559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr3:54067729-54067965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
197-442
               

               
Cow position:
               
chr3:4548954-4549192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
15, 168
               

               
Conread position:
               
198-456
               

               
Cow position:
               
chr3:83889178-83889438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
199-438
               

               
Cow position:
               
chr3:59933302-59933551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
199-450
               

               
Cow position:
               
chr3:56704387-56704126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
199-453
               

               
Cow position:
               
chr3:20841938-20841693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
200-442
               

               
Cow position:
               
chr3:63844862-63845115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
201-449
               

               
Cow position:
               
chr3:84174234-84174486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
201-452
               

               
Cow position:
               
chr3:59702107-59702361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
201-455
               

               
Cow position:
               
chr3:9026153-9025896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
203-455
               

               
Cow position:
               
chr3:59299511-59299764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
203-456
               

               
Cow position:
               
chr3:13241140-13240884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
204-442
               

               
Cow position:
               
chr3:29334479-29334236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
204-445
               

               
Cow position:
               
chr3:79272638-79272398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 149
               

               
Conread position:
               
206-442
               

               
Cow position:
               
chr3:74644495-74644735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
208-456
               

               
Cow position:
               
chr3:75173640-75173411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
209-445
               

               
Cow position:
               
chr3:2637868-2638111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
209-445
               

               
Cow position:
               
chr3:23132226-23131990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr3:6182278-6182058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
211-456
               

               
Cow position:
               
chr3:26338083-26337827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
212-456
               

               
Cow position:
               
chr3:5040362-5040113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
213-445
               

               
Cow position:
               
chr3:49996777-49996539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
216-368
               

               
Cow position:
               
chr3:21997839-21997686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-377
               

               
Cow position:
               
chr3:4480892-4481053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chr3:82629265-82629430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr3:71474455-71474225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr3:5305747-5305990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chr3:40213084-40212847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr3:12090622-12090866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr3:56949139-56948905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr3:69650940-69650709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
217-356
               

               
Cow position:
               
chr3:51349773-51349913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
217-445
               

               
Cow position:
               
chr3:9120795-9121020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
217-454
               

               
Cow position:
               
chr3:69785675-69785433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
217-455
               

               
Cow position:
               
chr3:11281716-11281956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chr3:8349614-8349397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
218-442
               

               
Cow position:
               
chr3:68303267-68303493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
218-453
               

               
Cow position:
               
chr3:1011437-1011678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
218-455
               

               
Cow position:
               
chr3:41873852-41874095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr3:14770931-14770697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr3:46792336-46792574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr3:73525287-73525046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
219-442
               

               
Cow position:
               
chr3:44961052-44960843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
220-397
               

               
Cow position:
               
chr3:57877519-57877698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
220-448
               

               
Cow position:
               
chr3:25905096-25904858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
221-439
               

               
Cow position:
               
chr3:46559766-46559544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
222-438
               

               
Cow position:
               
chr3:52456873-52457080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
222-442
               

               
Cow position:
               
chr3:82366084-82366304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
223-441
               

               
Cow position:
               
chr3:15973522-15973744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
224-436
               

               
Cow position:
               
chr3:70756684-70756470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
224-442
               

               
Cow position:
               
chr3:35624588-35624368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
224-442
               

               
Cow position:
               
chr3:84928060-84928282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
224-456
               

               
Cow position:
               
chr3:58452005-58452234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
226-442
               

               
Cow position:
               
chr3:54905577-54905781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
227-378
               

               
Cow position:
               
chr3:44330478-44330325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
227-438
               

               
Cow position:
               
chr3:41863584-41863793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 145
               

               
Conread position:
               
227-442
               

               
Cow position:
               
chr3:6728371-6728146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
227-451
               

               
Cow position:
               
chr3:75222462-75222689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
228-438
               

               
Cow position:
               
chr3:44959902-44960116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
229-442
               

               
Cow position:
               
chr3:8814152-8813929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 209
               

               
Conread position:
               
230-451
               

               
Cow position:
               
chr3:83770694-83770918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
234-451
               

               
Cow position:
               
chr3:32317865-32317645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
235-431
               

               
Cow position:
               
chr3:72255452-72255254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
235-456
               

               
Cow position:
               
chr3:22924408-22924192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
237-445
               

               
Cow position:
               
chr3:33002356-33002563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
238-422
               

               
Cow position:
               
chr3:35238983-35239166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr3:5703148-5703351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr3:28902789-28902587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
238-445
               

               
Cow position:
               
chr3:17305009-17304792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
238-447
               

               
Cow position:
               
chr3:20021239-20021447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
238-455
               

               
Cow position:
               
chr3:76269862-76270075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr3:28897048-28896846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
239-455
               

               
Cow position:
               
chr3:78071821-78071604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
239-455
               

               
Cow position:
               
chr3:84137844-84137627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
240-441
               

               
Cow position:
               
chr3:15160492-15160691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
240-442
               

               
Cow position:
               
chr3:67407394-67407192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
240-456
               

               
Cow position:
               
chr3:4120394-4120181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
240-456
               

               
Cow position:
               
chr3:18479326-18479107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
241-456
               

               
Cow position:
               
chr3:11198388-11198167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 159
               

               
Conread position:
               
242-442
               

               
Cow position:
               
chr3:45314318-45314527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
242-455
               

               
Cow position:
               
chr3:80958536-80958322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
242-456
               

               
Cow position:
               
chr3:76056311-76056098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
243-456
               

               
Cow position:
               
chr3:82195461-82195673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr3:41366733-41366525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
247-433
               

               
Cow position:
               
chr3:62312775-62312964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
247-433
               

               
Cow position:
               
chr3:62370034-62370223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
247-442
               

               
Cow position:
               
chr3:58010848-58010659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
247-445
               

               
Cow position:
               
chr3:32436621-32436816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
146, 9
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr3:45743884-45744099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
248-440
               

               
Cow position:
               
chr3:59271813-59272004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
248-442
               

               
Cow position:
               
chr3:59268351-59268549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr3:985994-986193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr3:31793904-31793704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 195
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr3:58101659-58101853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
248-448
               

               
Cow position:
               
chr3:59947645-59947849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
248-454
               

               
Cow position:
               
chr3:43389148-43388938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr3:79339599-79339388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr3:84807348-84807136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr3:13882541-13882328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr3:38248631-38248845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr3:63860631-63860421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr3:70402624-70402828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 114
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr3:72027616-72027827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
249-429
               

               
Cow position:
               
chr3:14589262-14589068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr3:12669117-12669314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr3:32376793-32376987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr3:59681923-59681732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr3:73701485-73701673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
249-449
               

               
Cow position:
               
chr3:31115289-31115097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
249-449
               

               
Cow position:
               
chr3:75966800-75966600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
249-454
               

               
Cow position:
               
chr3:53604765-53604557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr3:7381850-7381643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr3:27286499-27286704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr3:51150109-51150319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 169
               

               
Conread position:
               
250-442
               

               
Cow position:
               
chr3:80910580-80910772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
250-448
               

               
Cow position:
               
chr3:55730488-55730285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
251-456
               

               
Cow position:
               
chr3:79893515-79893307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
252-438
               

               
Cow position:
               
chr3:80023325-80023144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr3:23037525-23037333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr3:47199143-47198951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 166
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr3:61024039-61023846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 188
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr3:25735922-25735725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr3:80172983-80173177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr3:11027260-11027466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr3:20158052-20158263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr3:25038008-25037814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr3:36412104-36411900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr3:68289662-68289871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
253-437
               

               
Cow position:
               
chr3:20066169-20065977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr3:12178041-12178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr3:84154400-84154593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
253-456
               

               
Cow position:
               
chr3:18700126-18699916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
253-456
               

               
Cow position:
               
chr3:59317687-59317889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr3:59885526-59885706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
255-442
               

               
Cow position:
               
chr3:26783520-26783332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
257-443
               

               
Cow position:
               
chr3:81616464-81616274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
258-442
               

               
Cow position:
               
chr3:41510566-41510753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
258-442
               

               
Cow position:
               
chr3:52845546-52845730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr3:35802951-35802758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr3:54350451-54350256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
258-453
               

               
Cow position:
               
chr3:44207888-44207691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
260-442
               

               
Cow position:
               
chr3:20911418-20911236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
260-442
               

               
Cow position:
               
chr3:83671847-83672030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
260-452
               

               
Cow position:
               
chr3:37641317-37641513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
262-423
               

               
Cow position:
               
chr3:70431424-70431590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
262-433
               

               
Cow position:
               
chr3:83199505-83199679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
262-436
               

               
Cow position:
               
chr3:1028654-1028477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
262-442
               

               
Cow position:
               
chr3:15795213-15795397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
262-442
               

               
Cow position:
               
chr3:83705543-83705360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
262-445
               

               
Cow position:
               
chr3:19044772-19044590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
262-453
               

               
Cow position:
               
chr3:62186145-62186343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 193
               

               
Conread position:
               
262-454
               

               
Cow position:
               
chr3:3164116-3163928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
262-454
               

               
Cow position:
               
chr3:15859385-15859194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
262-455
               

               
Cow position:
               
chr3:16710806-16710608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr3:37851490-37851686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr3:38331618-38331420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr3:44720495-44720687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr3:58614450-58614656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr3:79398136-79398334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr3:83934719-83934911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
263-454
               

               
Cow position:
               
chr3:17531743-17531550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
263-456
               

               
Cow position:
               
chr3:75183303-75183508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
263-456
               

               
Cow position:
               
chr3:76168637-76168441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
36, 185
               

               
Conread position:
               
264-442
               

               
Cow position:
               
chr3:69205014-69205191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
264-455
               

               
Cow position:
               
chr3:64800554-64800359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
264-456
               

               
Cow position:
               
chr3:6265781-6265979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
264-456
               

               
Cow position:
               
chr3:78258759-78258561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-456
               

               
Cow position:
               
chr3:57641799-57641991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
269-442
               

               
Cow position:
               
chr3:62789954-62789775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr3:61680318-61680495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
269-451
               

               
Cow position:
               
chr3:73943873-73943688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
269-454
               

               
Cow position:
               
chr3:2016436-2016619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
269-454
               

               
Cow position:
               
chr3:46259711-46259900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
269-455
               

               
Cow position:
               
chr3:51578120-51577937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
269-455
               

               
Cow position:
               
chr3:59810428-59810239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
270-442
               

               
Cow position:
               
chr3:562792-562614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
271-442
               

               
Cow position:
               
chr3:18471304-18471478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
271-456
               

               
Cow position:
               
chr3:26977537-26977725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
272-442
               

               
Cow position:
               
chr3:74050698-74050531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr3:35079504-35079316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr3:66885027-66884842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
273-436
               

               
Cow position:
               
chr3:67942531-67942364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-442
               

               
Cow position:
               
chr3:17039617-17039790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
273-442
               

               
Cow position:
               
chr3:82425075-82424906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
273-454
               

               
Cow position:
               
chr3:21694229-21694413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
274-456
               

               
Cow position:
               
chr3:51153051-51153233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
278-445
               

               
Cow position:
               
chr3:25702332-25702153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-445
               

               
Cow position:
               
chr3:56754523-56754356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
278-454
               

               
Cow position:
               
chr3:64910086-64909907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
278-456
               

               
Cow position:
               
chr3:11607832-11608006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr3:4518172-4518013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr3:40958116-40957957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
279-441
               

               
Cow position:
               
chr3:74515327-74515162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr3:43896049-43895888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr3:55106138-55105971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr3:63069355-63069186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
279-442
               

               
Cow position:
               
chr3:77098812-77098649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
279-445
               

               
Cow position:
               
chr3:26393289-26393121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
279-445
               

               
Cow position:
               
chr3:29234670-29234500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
279-445
               

               
Cow position:
               
chr3:44534524-44534356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
279-456
               

               
Cow position:
               
chr3:19611341-19611164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
279-456
               

               
Cow position:
               
chr3:68094155-68094341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
280-440
               

               
Cow position:
               
chr3:2538252-2538410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
280-442
               

               
Cow position:
               
chr3:3453591-3453757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
280-454
               

               
Cow position:
               
chr3:3262822-3262637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
282-456
               

               
Cow position:
               
chr3:44594635-44594814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
283-442
               

               
Cow position:
               
chr3:8523139-8522979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
285-442
               

               
Cow position:
               
chr3:8147509-8147348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
285-442
               

               
Cow position:
               
chr3:22868703-22868541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
285-445
               

               
Cow position:
               
chr3:4931824-4931652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr3:3011163-3011334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 132
               

               
Conread position:
               
286-442
               

               
Cow position:
               
chr3:49787576-49787731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
286-442
               

               
Cow position:
               
chr3:76300789-76300949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
286-445
               

               
Cow position:
               
chr3:2636912-2636756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
286-445
               

               
Cow position:
               
chr3:42589116-42589277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
286-456
               

               
Cow position:
               
chr3:635195-635367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
286-456
               

               
Cow position:
               
chr3:58929517-58929342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
287-436
               

               
Cow position:
               
chr3:6579504-6579649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
287-441
               

               
Cow position:
               
chr3:42483945-42484101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
287-442
               

               
Cow position:
               
chr3:48537381-48537541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
287-445
               

               
Cow position:
               
chr3:58558298-58558460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-448
               

               
Cow position:
               
chr3:32248030-32248195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-450
               

               
Cow position:
               
chr3:621453-621624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-454
               

               
Cow position:
               
chr3:48300442-48300272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr3:4071752-4071580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr3:24220559-24220391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
288-445
               

               
Cow position:
               
chr3:43016431-43016262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
288-449
               

               
Cow position:
               
chr3:2636969-2637127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
288-455
               

               
Cow position:
               
chr3:77665531-77665363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
289-442
               

               
Cow position:
               
chr3:22078096-22078253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
289-456
               

               
Cow position:
               
chr3:21959680-21959854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
292-448
               

               
Cow position:
               
chr3:44218789-44218949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-454
               

               
Cow position:
               
chr3:16867847-16868010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
292-455
               

               
Cow position:
               
chr3:51543458-51543627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
292-455
               

               
Cow position:
               
chr3:74127485-74127312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
293-456
               

               
Cow position:
               
chr3:61171344-61171169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-456
               

               
Cow position:
               
chr3:75907936-75908098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
298-442
               

               
Cow position:
               
chr3:19641089-19641240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
298-442
               

               
Cow position:
               
chr3:66354709-66354856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
298-442
               

               
Cow position:
               
chr3:73410317-73410458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
298-454
               

               
Cow position:
               
chr3:18764132-18764292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
298-454
               

               
Cow position:
               
chr3:58497688-58497848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr3:13927847-13928006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr3:20888632-20888469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
298-456
               

               
Cow position:
               
chr3:8540538-8540688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
298-456
               

               
Cow position:
               
chr3:60371013-60371174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
299-448
               

               
Cow position:
               
chr3:29943888-29944042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
300-442
               

               
Cow position:
               
chr3:78115560-78115415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
301-456
               

               
Cow position:
               
chr3:18301537-18301379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
302-456
               

               
Cow position:
               
chr3:72291267-72291422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
303-445
               

               
Cow position:
               
chr3:7408471-7408616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
309-445
               

               
Cow position:
               
chr3:72626704-72626564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
311-442
               

               
Cow position:
               
chr3:58562742-58562876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
315-439
               

               
Cow position:
               
chr3:42933528-42933655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
315-456
               

               
Cow position:
               
chr3:70632192-70632338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
320-456
               

               
Cow position:
               
chr3:79877079-79877220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
324-442
               

               
Cow position:
               
chr3:66563839-66563960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
327-442
               

               
Cow position:
               
chr3:3887580-3887464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
327-456
               

               
Cow position:
               
chr3:59926689-59926822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
329-442
               

               
Cow position:
               
chr3:478762-478649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
330-444
               

               
Cow position:
               
chr3:75975019-75974901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
331-440
               

               
Cow position:
               
chr3:52147380-52147268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
340-453
               

               
Cow position:
               
chr3:29385940-29386055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               
Show alignments to all cow chromosomes.