Cow genome map

Conread name: Ss1.1-uFN-UNL-P-FN-bb-g-10-0-UNL.s1.3

Conread position: 87-269
Cow position: chrX:40647853-40648038 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 20

Conread position: 87-271
Cow position: chrX:12018152-12018346 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 124

Conread position: 87-354
Cow position: chrX:37119465-37119731 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 11

Conread position: 87-363
Cow position: chrX:22454216-22453951 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 22

Conread position: 87-389
Cow position: chrX:24288053-24287760 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 20

Conread position: 87-445
Cow position: chrX:31489391-31489752 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 87-455
Cow position: chrX:45976796-45977167 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 63, 19

Conread position: 89-367
Cow position: chrX:46433364-46433642 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 28

Conread position: 94-375
Cow position: chrX:8797129-8797409 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 17

Conread position: 94-388
Cow position: chrX:33205092-33204796 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 22

Conread position: 97-441
Cow position: chrX:36197847-36198202 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 104

Conread position: 98-266
Cow position: chrX:42461865-42461695 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 114

Conread position: 98-368
Cow position: chrX:878498-878227 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 98-437
Cow position: chrX:40269365-40269731 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 9

Conread position: 98-442
Cow position: chrX:40035563-40035214 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 45

Conread position: 100-390
Cow position: chrX:28878291-28878000 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 123

Conread position: 100-442
Cow position: chrX:34315403-34315755 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 36

Conread position: 100-442
Cow position: chrX:42247307-42246953 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 147

Conread position: 100-456
Cow position: chrX:7178781-7179126 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 101-245
Cow position: chrX:22376537-22376683 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 27

Conread position: 101-286
Cow position: chrX:29488119-29487939 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 8

Conread position: 101-456
Cow position: chrX:17949609-17949250 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 106

Conread position: 102-445
Cow position: chrX:28013565-28013209 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 115

Conread position: 103-339
Cow position: chrX:44836871-44837098 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 196, 7

Conread position: 105-345
Cow position: chrX:19690107-19690345 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 76

Conread position: 105-438
Cow position: chrX:9635295-9634968 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 44

Conread position: 105-456
Cow position: chrX:32420104-32420451 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 90

Conread position: 105-456
Cow position: chrX:33000790-33001140 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 105-456
Cow position: chrX:36975835-36976190 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 149

Conread position: 106-246
Cow position: chrX:38439365-38439510 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 138

Conread position: 106-271
Cow position: chrX:28845716-28845887 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 139

Conread position: 106-312
Cow position: chrX:26440895-26440689 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 112

Conread position: 106-316
Cow position: chrX:45993107-45993330 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 12

Conread position: 106-354
Cow position: chrX:11073304-11073052 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 77

Conread position: 106-355
Cow position: chrX:39415480-39415230 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 108

Conread position: 106-366
Cow position: chrX:5679682-5679421 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 86

Conread position: 106-371
Cow position: chrX:38728621-38728890 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 115

Conread position: 106-377
Cow position: chrX:36067901-36068177 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 7, 28

Conread position: 106-384
Cow position: chrX:38006877-38006603 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 106

Conread position: 106-395
Cow position: chrX:32431511-32431805 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 135

Conread position: 106-412
Cow position: chrX:13647898-13647586 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 81

Conread position: 106-428
Cow position: chrX:47344182-47344513 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 45

Conread position: 106-434
Cow position: chrX:40685444-40685109 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 142

Conread position: 106-438
Cow position: chrX:17794869-17795203 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 10, 44

Conread position: 106-438
Cow position: chrX:35383129-35382818 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 27, 84

Conread position: 106-441
Cow position: chrX:6690369-6690031 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 10

Conread position: 106-442
Cow position: chrX:23514128-23513774 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 97

Conread position: 106-442
Cow position: chrX:24365939-24365594 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 5

Conread position: 106-442
Cow position: chrX:31250277-31250618 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 21

Conread position: 106-442
Cow position: chrX:36355999-36356332 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 7, 114

Conread position: 106-442
Cow position: chrX:38963989-38964325 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 144

Conread position: 106-442
Cow position: chrX:41122954-41123273 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 44

Conread position: 106-443
Cow position: chrX:34411728-34412077 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 144

Conread position: 106-455
Cow position: chrX:20340004-20339654 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 106-456
Cow position: chrX:4996488-4996831 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 65

Conread position: 106-456
Cow position: chrX:27442668-27442297 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 363

Conread position: 108-445
Cow position: chrX:22283722-22284070 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 84

Conread position: 109-377
Cow position: chrX:10394208-10393948 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 93

Conread position: 109-456
Cow position: chrX:4512124-4512486 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 21, 354

Conread position: 110-346
Cow position: chrX:37574742-37574971 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 38

Conread position: 110-380
Cow position: chrX:6260267-6259985 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 21, 142

Conread position: 110-428
Cow position: chrX:31252309-31252613 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 109

Conread position: 110-430
Cow position: chrX:8730977-8731310 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 142

Conread position: 110-438
Cow position: chrX:21986401-21986077 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 137

Conread position: 110-454
Cow position: chrX:5118611-5118258 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 112

Conread position: 111-440
Cow position: chrX:8917288-8917621 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 114

Conread position: 112-391
Cow position: chrX:48044621-48044340 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 106

Conread position: 112-442
Cow position: chrX:34376840-34377167 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 85

Conread position: 112-442
Cow position: chrX:46032829-46032500 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 102

Conread position: 113-447
Cow position: chrX:9252266-9251930 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 25

Conread position: 114-266
Cow position: chrX:48243566-48243417 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 35

Conread position: 114-442
Cow position: chrX:40826859-40826522 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 95

Conread position: 115-239
Cow position: chrX:23497772-23497644 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 106

Conread position: 115-255
Cow position: chrX:41743807-41743952 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 129

Conread position: 115-256
Cow position: chrX:17497981-17498124 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 77

Conread position: 115-265
Cow position: chrX:36961535-36961689 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 101

Conread position: 115-266
Cow position: chrX:35681234-35681391 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 113

Conread position: 115-273
Cow position: chrX:42874877-42875039 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 103

Conread position: 115-275
Cow position: chrX:41167069-41166904 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 129

Conread position: 115-286
Cow position: chrX:13785467-13785291 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 115-286
Cow position: chrX:26875987-26875812 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 107

Conread position: 115-290
Cow position: chrX:6234557-6234376 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 129

Conread position: 115-296
Cow position: chrX:11589692-11589509 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 106

Conread position: 115-325
Cow position: chrX:27680295-27680507 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 48

Conread position: 115-336
Cow position: chrX:11082718-11082502 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 34

Conread position: 115-339
Cow position: chrX:26625774-26625548 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 33

Conread position: 115-339
Cow position: chrX:46722841-46722612 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 91

Conread position: 115-339
Cow position: chrX:47301006-47300781 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 37

Conread position: 115-339
Cow position: chrX:47302980-47302755 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 37

Conread position: 115-339
Cow position: chrX:48571099-48570866 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 120

Conread position: 115-346
Cow position: chrX:1514511-1514288 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 34

Conread position: 115-347
Cow position: chrX:37232309-37232539 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 18, 88

Conread position: 115-347
Cow position: chrX:39558454-39558217 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 128

Conread position: 115-349
Cow position: chrX:19273826-19273573 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 143

Conread position: 115-353
Cow position: chrX:29120942-29121185 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 115

Conread position: 115-355
Cow position: chrX:1503234-1503467 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 58

Conread position: 115-355
Cow position: chrX:7646152-7646396 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 49

Conread position: 115-355
Cow position: chrX:33493674-33493916 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 25

Conread position: 115-360
Cow position: chrX:40692855-40692607 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 114

Conread position: 115-363
Cow position: chrX:39126229-39126475 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 76

Conread position: 115-365
Cow position: chrX:29289476-29289728 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 15, 99

Conread position: 115-366
Cow position: chrX:30543391-30543134 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 249

Conread position: 115-368
Cow position: chrX:23091777-23092026 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 95, 18

Conread position: 115-368
Cow position: chrX:31311925-31312182 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 18, 60

Conread position: 115-371
Cow position: chrX:11717888-11717627 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 115-375
Cow position: chrX:9416797-9416524 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 92

Conread position: 115-375
Cow position: chrX:27772065-27771808 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 78

Conread position: 115-376
Cow position: chrX:17541860-17542122 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 36

Conread position: 115-377
Cow position: chrX:4043956-4043705 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 184, 18

Conread position: 115-377
Cow position: chrX:17725870-17726138 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 127

Conread position: 115-377
Cow position: chrX:18695027-18694770 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 76

Conread position: 115-378
Cow position: chrX:616366-616095 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 107

Conread position: 115-378
Cow position: chrX:619108-618847 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 91

Conread position: 115-378
Cow position: chrX:9365779-9365513 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 83

Conread position: 115-378
Cow position: chrX:13382225-13382488 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 102

Conread position: 115-378
Cow position: chrX:27516424-27516681 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 91

Conread position: 115-378
Cow position: chrX:29680364-29680097 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 104

Conread position: 115-378
Cow position: chrX:34401894-34402168 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 117

Conread position: 115-378
Cow position: chrX:42235632-42235364 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 130

Conread position: 115-378
Cow position: chrX:43730322-43730061 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 65

Conread position: 115-384
Cow position: chrX:10959501-10959227 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 102

Conread position: 115-384
Cow position: chrX:17630907-17630632 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 30

Conread position: 115-387
Cow position: chrX:14599429-14599704 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 91

Conread position: 115-394
Cow position: chrX:34662954-34662669 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 89

Conread position: 115-410
Cow position: chrX:27301766-27302073 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 105

Conread position: 115-412
Cow position: chrX:169644-169343 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 35

Conread position: 115-419
Cow position: chrX:27946163-27945848 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 120

Conread position: 115-423
Cow position: chrX:22821947-22822264 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 78

Conread position: 115-424
Cow position: chrX:35542791-35543094 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 86

Conread position: 115-428
Cow position: chrX:34502818-34503133 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 19, 101

Conread position: 115-429
Cow position: chrX:4768640-4768943 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 57

Conread position: 115-429
Cow position: chrX:29544982-29544671 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 15, 98

Conread position: 115-429
Cow position: chrX:34238616-34238938 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 36

Conread position: 115-430
Cow position: chrX:1616148-1615842 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 117

Conread position: 115-430
Cow position: chrX:10831597-10831265 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 115-431
Cow position: chrX:32820924-32821257 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 99

Conread position: 115-431
Cow position: chrX:34543682-34544003 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 115-433
Cow position: chrX:20151742-20152067 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 140

Conread position: 115-436
Cow position: chrX:15147293-15146977 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 102

Conread position: 115-436
Cow position: chrX:29937983-29938314 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 130

Conread position: 115-437
Cow position: chrX:29601934-29601606 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 128

Conread position: 115-437
Cow position: chrX:37781215-37780889 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 18, 132

Conread position: 115-438
Cow position: chrX:1176083-1175766 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 81

Conread position: 115-438
Cow position: chrX:14973845-14973533 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 102

Conread position: 115-438
Cow position: chrX:22074696-22075019 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 36

Conread position: 115-438
Cow position: chrX:26881672-26881338 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 115-438
Cow position: chrX:42927923-42927606 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 91

Conread position: 115-439
Cow position: chrX:16541778-16541431 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 133

Conread position: 115-439
Cow position: chrX:35268778-35269081 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 34

Conread position: 115-440
Cow position: chrX:38654534-38654206 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 99

Conread position: 115-441
Cow position: chrX:8925597-8925907 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 15, 105

Conread position: 115-441
Cow position: chrX:26492902-26493234 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 101

Conread position: 115-441
Cow position: chrX:29542323-29542001 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 146

Conread position: 115-442
Cow position: chrX:5017518-5017188 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 129

Conread position: 115-442
Cow position: chrX:5638269-5637951 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 89

Conread position: 115-442
Cow position: chrX:5919392-5919715 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 34

Conread position: 115-442
Cow position: chrX:7351195-7351529 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 111

Conread position: 115-442
Cow position: chrX:8869506-8869176 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 115-442
Cow position: chrX:11614595-11614903 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 102

Conread position: 115-442
Cow position: chrX:11655988-11656306 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 94

Conread position: 115-442
Cow position: chrX:12249699-12250043 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 76

Conread position: 115-442
Cow position: chrX:13912975-13913303 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 18

Conread position: 115-442
Cow position: chrX:16762662-16762996 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 131

Conread position: 115-442
Cow position: chrX:27394123-27393790 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 115-442
Cow position: chrX:30962978-30962647 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 95

Conread position: 115-442
Cow position: chrX:34441556-34441225 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 127

Conread position: 115-442
Cow position: chrX:34505151-34504825 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 19, 37

Conread position: 115-442
Cow position: chrX:37072304-37072614 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 36

Conread position: 115-442
Cow position: chrX:37489622-37489957 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 56

Conread position: 115-442
Cow position: chrX:38094627-38094298 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 170

Conread position: 115-442
Cow position: chrX:38218607-38218941 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 115-442
Cow position: chrX:38853094-38853439 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 18, 63

Conread position: 115-442
Cow position: chrX:40557785-40557430 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 18, 132

Conread position: 115-442
Cow position: chrX:42492619-42492293 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 115-442
Cow position: chrX:42994512-42994824 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 35

Conread position: 115-442
Cow position: chrX:47280036-47279708 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 87

Conread position: 115-443
Cow position: chrX:2300823-2301152 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 213
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 33

Conread position: 115-443
Cow position: chrX:31442926-31442610 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 115-445
Cow position: chrX:4399025-4399349 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 115-445
Cow position: chrX:7721885-7722205 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 129

Conread position: 115-445
Cow position: chrX:9425844-9425531 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 78

Conread position: 115-445
Cow position: chrX:21593183-21593522 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 90

Conread position: 115-445
Cow position: chrX:27509124-27508793 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 115-445
Cow position: chrX:28846986-28846662 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 91

Conread position: 115-445
Cow position: chrX:37955729-37956076 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 55

Conread position: 115-446
Cow position: chrX:36283245-36283572 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 95

Conread position: 115-449
Cow position: chrX:46072924-46072595 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 129

Conread position: 115-451
Cow position: chrX:870274-869945 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 39

Conread position: 115-451
Cow position: chrX:21642582-21642244 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 88

Conread position: 115-451
Cow position: chrX:22921212-22921558 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 92

Conread position: 115-452
Cow position: chrX:22812960-22813303 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 69

Conread position: 115-453
Cow position: chrX:33539061-33539390 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 124

Conread position: 115-454
Cow position: chrX:6407445-6407780 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 115-454
Cow position: chrX:18204567-18204226 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 90

Conread position: 115-454
Cow position: chrX:18485694-18486042 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 97

Conread position: 115-454
Cow position: chrX:27174891-27175240 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 115-455
Cow position: chrX:13177569-13177243 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 44

Conread position: 115-455
Cow position: chrX:20584220-20584552 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 18, 109

Conread position: 115-455
Cow position: chrX:21672451-21672805 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 98

Conread position: 115-455
Cow position: chrX:41879036-41878696 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 115-456
Cow position: chrX:3579840-3580186 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 115-456
Cow position: chrX:4403210-4403561 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 15, 58

Conread position: 115-456
Cow position: chrX:9651129-9650781 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 61

Conread position: 115-456
Cow position: chrX:12290622-12290962 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 115-456
Cow position: chrX:15545789-15546123 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 115-456
Cow position: chrX:23563897-23563548 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 91

Conread position: 115-456
Cow position: chrX:24331674-24332018 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 91

Conread position: 115-456
Cow position: chrX:25207947-25207619 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 79

Conread position: 115-456
Cow position: chrX:25816004-25815656 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 22

Conread position: 115-456
Cow position: chrX:27145519-27145844 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 63

Conread position: 115-456
Cow position: chrX:27432018-27431681 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 91

Conread position: 115-456
Cow position: chrX:34532417-34532753 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 66

Conread position: 115-456
Cow position: chrX:35885834-35885491 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 115-456
Cow position: chrX:40480973-40480608 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 106

Conread position: 115-456
Cow position: chrX:47657280-47657634 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 49

Conread position: 116-335
Cow position: chrX:21566299-21566526 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 130

Conread position: 116-367
Cow position: chrX:20697709-20697459 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 74

Conread position: 116-372
Cow position: chrX:45113514-45113777 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 106

Conread position: 116-375
Cow position: chrX:41884517-41884252 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 131

Conread position: 116-377
Cow position: chrX:29194131-29194390 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 52

Conread position: 116-378
Cow position: chrX:11085160-11084900 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 77

Conread position: 116-385
Cow position: chrX:6278605-6278326 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 116-397
Cow position: chrX:33639868-33640158 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 102

Conread position: 116-426
Cow position: chrX:12309489-12309173 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 79

Conread position: 116-439
Cow position: chrX:48262503-48262830 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 92

Conread position: 116-441
Cow position: chrX:13923766-13924088 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 83

Conread position: 116-441
Cow position: chrX:36393450-36393114 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 136

Conread position: 116-442
Cow position: chrX:34792411-34792095 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 90

Conread position: 116-442
Cow position: chrX:42381205-42380884 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 85

Conread position: 116-445
Cow position: chrX:45502049-45502366 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 39

Conread position: 116-454
Cow position: chrX:6544153-6544485 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 64

Conread position: 116-456
Cow position: chrX:4632955-4632613 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 116-456
Cow position: chrX:31729340-31729680 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 116-456
Cow position: chrX:33466508-33466865 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 89

Conread position: 117-297
Cow position: chrX:19003198-19003373 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 99

Conread position: 117-306
Cow position: chrX:12405489-12405291 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 130

Conread position: 117-316
Cow position: chrX:27685145-27685349 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 12, 96

Conread position: 117-337
Cow position: chrX:21004580-21004806 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 62

Conread position: 117-352
Cow position: chrX:10412087-10411847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 16, 98

Conread position: 117-359
Cow position: chrX:7571802-7572050 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 111

Conread position: 117-375
Cow position: chrX:47342025-47342275 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 89, 17

Conread position: 117-378
Cow position: chrX:16348672-16348408 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 130

Conread position: 117-416
Cow position: chrX:17888516-17888225 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 32

Conread position: 117-422
Cow position: chrX:7497141-7497445 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 72

Conread position: 117-422
Cow position: chrX:41068620-41068928 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 131

Conread position: 117-427
Cow position: chrX:46291036-46291354 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 76

Conread position: 117-429
Cow position: chrX:4279213-4278904 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 13, 31

Conread position: 117-433
Cow position: chrX:45875289-45875609 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 104

Conread position: 117-438
Cow position: chrX:15007252-15006935 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 104

Conread position: 117-438
Cow position: chrX:29229908-29230231 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 86

Conread position: 117-438
Cow position: chrX:44396917-44397235 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 98

Conread position: 117-442
Cow position: chrX:12979929-12979607 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 16, 32

Conread position: 117-442
Cow position: chrX:30133424-30133096 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 117-442
Cow position: chrX:30338044-30337726 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 34

Conread position: 117-442
Cow position: chrX:34313927-34314249 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 117-442
Cow position: chrX:34565181-34565513 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 117-442
Cow position: chrX:43115050-43115377 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 76

Conread position: 117-446
Cow position: chrX:38549350-38549679 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 117-448
Cow position: chrX:9201448-9201777 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 117-451
Cow position: chrX:32330056-32330409 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 54

Conread position: 117-454
Cow position: chrX:32020224-32019893 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 91

Conread position: 117-455
Cow position: chrX:29723639-29723991 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 13, 100

Conread position: 117-455
Cow position: chrX:41027055-41027402 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 117-456
Cow position: chrX:41526623-41526292 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 87

Conread position: 118-339
Cow position: chrX:45403931-45403703 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 117

Conread position: 118-350
Cow position: chrX:42171397-42171162 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 125

Conread position: 118-351
Cow position: chrX:917465-917232 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 25

Conread position: 118-355
Cow position: chrX:17662694-17662458 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 98

Conread position: 118-439
Cow position: chrX:35224195-35224501 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 102

Conread position: 118-448
Cow position: chrX:21327802-21328148 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 131

Conread position: 118-456
Cow position: chrX:41870972-41871298 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 119-267
Cow position: chrX:47209245-47209396 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 99

Conread position: 119-405
Cow position: chrX:32170988-32170704 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 114

Conread position: 119-442
Cow position: chrX:3654508-3654831 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 15, 88

Conread position: 119-442
Cow position: chrX:14884058-14883729 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 114

Conread position: 119-442
Cow position: chrX:44961648-44961983 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 125

Conread position: 119-442
Cow position: chrX:47484368-47484030 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 85

Conread position: 120-371
Cow position: chrX:18273156-18272903 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 127

Conread position: 120-439
Cow position: chrX:10516157-10516479 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 120-440
Cow position: chrX:45968061-45968363 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 29

Conread position: 120-455
Cow position: chrX:45110557-45110891 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 94

Conread position: 120-456
Cow position: chrX:10829333-10829678 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 93

Conread position: 121-414
Cow position: chrX:40283027-40283323 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 95

Conread position: 121-454
Cow position: chrX:14955863-14955526 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 9, 73

Conread position: 122-435
Cow position: chrX:31436381-31436690 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 57

Conread position: 123-426
Cow position: chrX:34222619-34222926 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 119

Conread position: 123-442
Cow position: chrX:44054712-44055031 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 82

Conread position: 123-443
Cow position: chrX:42855360-42855692 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 57

Conread position: 123-454
Cow position: chrX:27206720-27207033 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 176, 11

Conread position: 123-456
Cow position: chrX:12095870-12095529 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 84

Conread position: 124-442
Cow position: chrX:38560462-38560778 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 78

Conread position: 127-343
Cow position: chrX:11455137-11454921 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 10

Conread position: 127-391
Cow position: chrX:44657052-44656787 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 118

Conread position: 127-445
Cow position: chrX:46532592-46532259 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 122

Conread position: 127-456
Cow position: chrX:43049974-43050313 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 38

Conread position: 127-456
Cow position: chrX:48236732-48237059 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 21

Conread position: 128-310
Cow position: chrX:1572227-1572045 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 83

Conread position: 128-359
Cow position: chrX:5900379-5900606 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 86

Conread position: 128-359
Cow position: chrX:43779936-43779708 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 90

Conread position: 128-368
Cow position: chrX:42873304-42873538 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 63

Conread position: 128-371
Cow position: chrX:7710628-7710382 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 83

Conread position: 128-371
Cow position: chrX:29549637-29549396 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 114

Conread position: 128-381
Cow position: chrX:28134255-28134504 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 84

Conread position: 128-389
Cow position: chrX:16416422-16416676 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 20

Conread position: 128-391
Cow position: chrX:47046596-47046338 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 76

Conread position: 128-430
Cow position: chrX:27228038-27228345 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 88

Conread position: 128-440
Cow position: chrX:29050157-29050468 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 128-441
Cow position: chrX:20168468-20168782 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 128-445
Cow position: chrX:161323-161631 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 64

Conread position: 128-448
Cow position: chrX:5872231-5872567 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 128-449
Cow position: chrX:33654931-33654608 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 81

Conread position: 128-454
Cow position: chrX:151815-152146 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 64

Conread position: 128-454
Cow position: chrX:25035469-25035141 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 128-455
Cow position: chrX:20887729-20887407 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 70, 20

Conread position: 128-455
Cow position: chrX:27705497-27705828 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 71

Conread position: 128-455
Cow position: chrX:33855323-33854985 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 130

Conread position: 128-455
Cow position: chrX:44192533-44192201 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 128-455
Cow position: chrX:45413715-45413372 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 54

Conread position: 128-456
Cow position: chrX:1466071-1466407 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 128-456
Cow position: chrX:4269151-4268828 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 75

Conread position: 128-456
Cow position: chrX:22387332-22387001 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 85

Conread position: 128-456
Cow position: chrX:27446607-27446925 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 128-456
Cow position: chrX:46587730-46588062 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 114

Conread position: 129-378
Cow position: chrX:41271082-41270823 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 8

Conread position: 129-442
Cow position: chrX:13146894-13147212 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 71

Conread position: 129-455
Cow position: chrX:13121848-13122184 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 6

Conread position: 129-456
Cow position: chrX:11633591-11633926 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 113

Conread position: 129-456
Cow position: chrX:48071072-48071404 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 75

Conread position: 130-326
Cow position: chrX:2467798-2467994 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 58

Conread position: 130-339
Cow position: chrX:48195125-48194913 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 65

Conread position: 130-378
Cow position: chrX:37129181-37129432 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 113

Conread position: 130-390
Cow position: chrX:40809601-40809867 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 103

Conread position: 130-431
Cow position: chrX:13868615-13868921 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 18, 111

Conread position: 130-434
Cow position: chrX:20882025-20881741 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 50

Conread position: 130-442
Cow position: chrX:34540605-34540911 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 18

Conread position: 130-444
Cow position: chrX:36061070-36061390 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 115

Conread position: 130-445
Cow position: chrX:40680523-40680846 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 113

Conread position: 130-448
Cow position: chrX:5134386-5134708 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 7

Conread position: 130-455
Cow position: chrX:27261100-27261432 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 130-456
Cow position: chrX:17231646-17231979 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 131-354
Cow position: chrX:36514981-36514753 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 84

Conread position: 131-440
Cow position: chrX:6559532-6559230 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 74

Conread position: 131-456
Cow position: chrX:45598688-45598364 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 80

Conread position: 132-378
Cow position: chrX:23562549-23562798 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 50

Conread position: 132-440
Cow position: chrX:47873422-47873110 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 16, 70

Conread position: 132-442
Cow position: chrX:4296905-4296596 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 70

Conread position: 132-451
Cow position: chrX:35590843-35590521 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 84

Conread position: 134-400
Cow position: chrX:23113194-23113467 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 34

Conread position: 135-442
Cow position: chrX:22115401-22115086 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 79

Conread position: 135-442
Cow position: chrX:41238434-41238134 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 86

Conread position: 135-453
Cow position: chrX:16575040-16575346 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 76

Conread position: 137-378
Cow position: chrX:5135606-5135357 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 108

Conread position: 137-430
Cow position: chrX:41192627-41192905 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 41

Conread position: 139-430
Cow position: chrX:30840467-30840757 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 45

Conread position: 139-442
Cow position: chrX:4109116-4109413 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 5

Conread position: 140-405
Cow position: chrX:4515606-4515879 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 101

Conread position: 143-347
Cow position: chrX:12082397-12082192 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 99

Conread position: 147-442
Cow position: chrX:2675025-2674725 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 50

Conread position: 148-281
Cow position: chrX:17301376-17301242 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 148-359
Cow position: chrX:43527443-43527652 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 151, 67

Conread position: 148-362
Cow position: chrX:3130508-3130718 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 151, 26

Conread position: 148-430
Cow position: chrX:38208610-38208338 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 49

Conread position: 148-438
Cow position: chrX:1088203-1087924 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 29

Conread position: 148-442
Cow position: chrX:36866104-36866401 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 60, 91

Conread position: 148-442
Cow position: chrX:48003780-48004074 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 151, 54

Conread position: 148-445
Cow position: chrX:34554659-34554955 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 151, 83

Conread position: 149-341
Cow position: chrX:41111655-41111838 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 149-375
Cow position: chrX:15820531-15820754 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 59

Conread position: 149-445
Cow position: chrX:5063187-5063467 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 34

Conread position: 150-430
Cow position: chrX:44703137-44702849 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 66

Conread position: 150-454
Cow position: chrX:48558683-48558986 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 149, 13

Conread position: 152-353
Cow position: chrX:47054590-47054387 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 95

Conread position: 152-377
Cow position: chrX:4746304-4746084 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 147, 47

Conread position: 152-431
Cow position: chrX:27459793-27460085 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 94, 47

Conread position: 152-442
Cow position: chrX:296332-296620 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 119

Conread position: 152-442
Cow position: chrX:25036924-25037220 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 63

Conread position: 153-368
Cow position: chrX:19097284-19097067 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 50

Conread position: 153-442
Cow position: chrX:4153097-4152816 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 55, 88

Conread position: 153-442
Cow position: chrX:20957186-20957465 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 146, 63

Conread position: 153-445
Cow position: chrX:23561799-23562104 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 59

Conread position: 153-456
Cow position: chrX:41790507-41790186 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 49

Conread position: 154-451
Cow position: chrX:27380292-27380597 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 49

Conread position: 154-455
Cow position: chrX:7648462-7648172 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 145, 47

Conread position: 155-355
Cow position: chrX:46429881-46429679 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 17

Conread position: 155-442
Cow position: chrX:27511367-27511644 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 50

Conread position: 155-456
Cow position: chrX:39352720-39353015 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 103

Conread position: 157-456
Cow position: chrX:30271-30573 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 81

Conread position: 158-373
Cow position: chrX:31627038-31626821 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 87

Conread position: 158-442
Cow position: chrX:12437327-12437055 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 61

Conread position: 158-448
Cow position: chrX:19469563-19469280 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 140, 54

Conread position: 159-359
Cow position: chrX:32623511-32623714 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 82

Conread position: 159-371
Cow position: chrX:6223185-6222971 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 16

Conread position: 159-379
Cow position: chrX:32978133-32977922 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 140, 49

Conread position: 160-448
Cow position: chrX:44339379-44339087 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 160-456
Cow position: chrX:6541791-6541496 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 59

Conread position: 161-442
Cow position: chrX:35985764-35986043 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 82

Conread position: 163-445
Cow position: chrX:18964876-18964603 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 12

Conread position: 166-359
Cow position: chrX:19943286-19943092 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 75

Conread position: 166-438
Cow position: chrX:22393035-22392764 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 55, 43

Conread position: 168-455
Cow position: chrX:36367989-36367695 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 95, 73

Conread position: 169-442
Cow position: chrX:36392234-36391960 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 26

Conread position: 170-433
Cow position: chrX:4645957-4645695 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 45

Conread position: 171-442
Cow position: chrX:6599828-6599546 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 72

Conread position: 172-442
Cow position: chrX:11326143-11325881 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 155

Conread position: 175-431
Cow position: chrX:47061354-47061603 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 68

Conread position: 178-442
Cow position: chrX:42893880-42894150 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 69

Conread position: 178-455
Cow position: chrX:19394515-19394797 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 121, 64

Conread position: 180-456
Cow position: chrX:17956660-17956932 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 119, 32

Conread position: 181-381
Cow position: chrX:43116690-43116891 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 46

Conread position: 181-446
Cow position: chrX:42432546-42432279 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 27

Conread position: 182-438
Cow position: chrX:38642216-38642466 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 34

Conread position: 182-456
Cow position: chrX:35431277-35431000 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 26

Conread position: 184-376
Cow position: chrX:23498709-23498519 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 32

Conread position: 189-378
Cow position: chrX:20743576-20743764 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 53

Conread position: 191-438
Cow position: chrX:24749063-24749311 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 51

Conread position: 194-368
Cow position: chrX:25411886-25412058 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 22

Conread position: 195-440
Cow position: chrX:42836164-42836407 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 27

Conread position: 195-442
Cow position: chrX:35275965-35276214 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 104, 46

Conread position: 199-433
Cow position: chrX:42282560-42282796 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 29

Conread position: 199-448
Cow position: chrX:42450032-42449779 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 200-442
Cow position: chrX:24633667-24633914 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 42

Conread position: 200-448
Cow position: chrX:12972666-12972913 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 18

Conread position: 201-378
Cow position: chrX:36848592-36848416 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 15

Conread position: 201-441
Cow position: chrX:32910088-32910324 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 49

Conread position: 201-442
Cow position: chrX:4289425-4289662 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 42

Conread position: 201-442
Cow position: chrX:44202063-44201817 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 42

Conread position: 201-442
Cow position: chrX:46793762-46793522 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 27

Conread position: 201-445
Cow position: chrX:16836300-16836063 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 98, 17

Conread position: 201-451
Cow position: chrX:48198663-48198411 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 41

Conread position: 202-416
Cow position: chrX:44660603-44660386 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 39

Conread position: 202-438
Cow position: chrX:44591076-44590837 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 39

Conread position: 202-442
Cow position: chrX:3806670-3806907 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 10

Conread position: 203-442
Cow position: chrX:26843281-26843038 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 96, 9

Conread position: 203-442
Cow position: chrX:32574301-32574549 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 41

Conread position: 203-445
Cow position: chrX:29733603-29733361 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 96, 5

Conread position: 204-456
Cow position: chrX:36109628-36109372 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 37

Conread position: 205-442
Cow position: chrX:27668968-27668734 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 209-442
Cow position: chrX:45699977-45699752 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 7

Conread position: 209-456
Cow position: chrX:26205454-26205217 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 7

Conread position: 209-456
Cow position: chrX:30672403-30672142 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 32

Conread position: 211-443
Cow position: chrX:1552964-1553199 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 88, 30

Conread position: 212-423
Cow position: chrX:6007671-6007884 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 15

Conread position: 212-456
Cow position: chrX:43008605-43008852 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 87, 34

Conread position: 213-442
Cow position: chrX:32943079-32942852 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 28

Conread position: 216-360
Cow position: chrX:29501881-29501739 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 25

Conread position: 216-381
Cow position: chrX:31829461-31829295 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 25

Conread position: 216-438
Cow position: chrX:11653764-11653991 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 25

Conread position: 216-438
Cow position: chrX:27075051-27074827 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 25

Conread position: 216-439
Cow position: chrX:29478724-29478947 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 25

Conread position: 216-442
Cow position: chrX:39290359-39290583 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 25

Conread position: 216-442
Cow position: chrX:40336909-40337139 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 65

Conread position: 216-445
Cow position: chrX:40532043-40531795 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 24

Conread position: 216-454
Cow position: chrX:16984641-16984875 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 25

Conread position: 216-454
Cow position: chrX:35658800-35659034 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 84, 21

Conread position: 216-455
Cow position: chrX:34420734-34420977 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 83, 30

Conread position: 216-456
Cow position: chrX:23335972-23335732 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 83, 25

Conread position: 216-456
Cow position: chrX:42479833-42480069 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 25

Conread position: 217-439
Cow position: chrX:4328182-4327957 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 24

Conread position: 217-440
Cow position: chrX:2935958-2936179 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 25

Conread position: 218-442
Cow position: chrX:10252196-10251974 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 24

Conread position: 218-442
Cow position: chrX:24170727-24170497 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 23

Conread position: 218-442
Cow position: chrX:25846071-25845845 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 28

Conread position: 218-442
Cow position: chrX:32208820-32208599 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 24

Conread position: 218-451
Cow position: chrX:26979787-26979554 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 123, 28

Conread position: 218-453
Cow position: chrX:17292957-17293195 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 28

Conread position: 219-389
Cow position: chrX:39180230-39180060 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 22

Conread position: 219-440
Cow position: chrX:38967891-38968121 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 76

Conread position: 219-453
Cow position: chrX:17524381-17524146 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 22

Conread position: 219-453
Cow position: chrX:24336074-24335838 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 22

Conread position: 219-456
Cow position: chrX:41941626-41941865 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 80, 22

Conread position: 220-442
Cow position: chrX:4559743-4559962 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 21

Conread position: 221-438
Cow position: chrX:1122538-1122323 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 20

Conread position: 222-438
Cow position: chrX:38301815-38302038 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 77, 19

Conread position: 222-454
Cow position: chrX:19018825-19018588 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 19

Conread position: 225-444
Cow position: chrX:35392286-35392074 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 52

Conread position: 226-385
Cow position: chrX:25459724-25459562 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 15

Conread position: 229-442
Cow position: chrX:23266427-23266653 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 70, 210

Conread position: 230-439
Cow position: chrX:3494808-3494596 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 11

Conread position: 230-442
Cow position: chrX:29467764-29467554 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 69, 12

Conread position: 230-450
Cow position: chrX:753166-753398 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 11

Conread position: 231-430
Cow position: chrX:41810153-41809959 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 10

Conread position: 235-439
Cow position: chrX:19761772-19761974 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 134

Conread position: 235-442
Cow position: chrX:20345471-20345679 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 13

Conread position: 235-445
Cow position: chrX:31479989-31480197 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 58

Conread position: 235-455
Cow position: chrX:19356487-19356705 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 39, 57

Conread position: 235-455
Cow position: chrX:47854999-47855219 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 128

Conread position: 238-436
Cow position: chrX:44991392-44991195 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 133

Conread position: 238-443
Cow position: chrX:28940263-28940473 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 125

Conread position: 238-451
Cow position: chrX:28067871-28068088 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 238-456
Cow position: chrX:35285194-35285417 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 240-454
Cow position: chrX:5026279-5026492 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 119

Conread position: 241-385
Cow position: chrX:37062561-37062416 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 123

Conread position: 241-454
Cow position: chrX:32866899-32867110 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 131

Conread position: 243-442
Cow position: chrX:23359085-23358889 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 35

Conread position: 243-453
Cow position: chrX:20583692-20583899 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 56, 132

Conread position: 244-442
Cow position: chrX:46079112-46079316 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 172

Conread position: 245-454
Cow position: chrX:2314591-2314378 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 248-438
Cow position: chrX:4612851-4612650 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 177

Conread position: 248-445
Cow position: chrX:4091955-4092153 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 51, 165

Conread position: 248-445
Cow position: chrX:8642077-8642276 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 93, 53

Conread position: 248-445
Cow position: chrX:44040212-44040408 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 21

Conread position: 248-454
Cow position: chrX:37749952-37749755 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 39

Conread position: 248-456
Cow position: chrX:18439027-18439240 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 248-456
Cow position: chrX:46909846-46910050 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 123

Conread position: 249-438
Cow position: chrX:8326936-8327129 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 249-442
Cow position: chrX:19717551-19717739 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 120

Conread position: 249-442
Cow position: chrX:23471834-23471640 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 124

Conread position: 249-442
Cow position: chrX:34398752-34398555 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 249-442
Cow position: chrX:48822310-48822114 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 110

Conread position: 249-454
Cow position: chrX:11454216-11454415 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 63

Conread position: 252-437
Cow position: chrX:35681601-35681790 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 108

Conread position: 252-439
Cow position: chrX:44995533-44995725 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 252-442
Cow position: chrX:27270410-27270597 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 124

Conread position: 252-442
Cow position: chrX:27416127-27416323 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 44

Conread position: 252-455
Cow position: chrX:17498357-17498564 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 252-456
Cow position: chrX:34991399-34991606 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 119

Conread position: 253-385
Cow position: chrX:40452048-40451913 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 253-441
Cow position: chrX:876806-876620 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 88, 41

Conread position: 253-454
Cow position: chrX:14925310-14925514 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 20

Conread position: 253-456
Cow position: chrX:30958762-30958970 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 159

Conread position: 254-430
Cow position: chrX:31986537-31986356 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 101

Conread position: 255-445
Cow position: chrX:10415215-10415021 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 255-456
Cow position: chrX:41435511-41435300 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 255-456
Cow position: chrX:44123293-44123494 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 115

Conread position: 257-442
Cow position: chrX:31983545-31983350 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 257-455
Cow position: chrX:11517940-11517738 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 192

Conread position: 258-453
Cow position: chrX:41858841-41858644 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 115

Conread position: 259-442
Cow position: chrX:31250853-31250666 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 260-456
Cow position: chrX:19000169-19000369 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 261-456
Cow position: chrX:41010942-41011132 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 92

Conread position: 262-437
Cow position: chrX:45759716-45759892 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 110

Conread position: 262-439
Cow position: chrX:13347318-13347494 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 53

Conread position: 262-441
Cow position: chrX:755969-756147 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 30

Conread position: 262-442
Cow position: chrX:16556172-16555995 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 57

Conread position: 262-442
Cow position: chrX:37752061-37751883 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 99

Conread position: 262-442
Cow position: chrX:42875257-42875437 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 37, 101

Conread position: 262-443
Cow position: chrX:41453347-41453528 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 115

Conread position: 262-445
Cow position: chrX:47601279-47601092 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 262-455
Cow position: chrX:29451506-29451304 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 262-455
Cow position: chrX:48495042-48495241 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 18

Conread position: 262-456
Cow position: chrX:35409797-35409994 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 57

Conread position: 263-455
Cow position: chrX:6389127-6389319 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 50

Conread position: 264-433
Cow position: chrX:36922095-36921922 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 264-454
Cow position: chrX:597427-597237 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 46

Conread position: 264-456
Cow position: chrX:14951306-14951112 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 88

Conread position: 264-456
Cow position: chrX:19203299-19203103 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 265-441
Cow position: chrX:41166777-41166602 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 84

Conread position: 267-455
Cow position: chrX:11602431-11602246 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 74, 11

Conread position: 268-456
Cow position: chrX:1101608-1101793 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 78

Conread position: 269-442
Cow position: chrX:27415528-27415359 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 95

Conread position: 269-442
Cow position: chrX:37867305-37867482 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 269-442
Cow position: chrX:42760304-42760481 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 269-448
Cow position: chrX:46533253-46533070 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 269-456
Cow position: chrX:4169979-4169786 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 102

Conread position: 269-456
Cow position: chrX:47100545-47100353 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 30, 184

Conread position: 270-456
Cow position: chrX:11529395-11529580 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 95

Conread position: 270-456
Cow position: chrX:11781504-11781686 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 103

Conread position: 273-437
Cow position: chrX:15100039-15100201 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 85

Conread position: 273-442
Cow position: chrX:6480540-6480367 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 273-455
Cow position: chrX:28106903-28107087 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 98

Conread position: 274-439
Cow position: chrX:37867489-37867658 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 278-430
Cow position: chrX:10237852-10237697 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 73

Conread position: 278-439
Cow position: chrX:26882019-26881854 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 279-438
Cow position: chrX:23485583-23485754 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 279-440
Cow position: chrX:22552917-22552753 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 137

Conread position: 279-441
Cow position: chrX:23497629-23497470 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 83

Conread position: 279-442
Cow position: chrX:12812-12971 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 31

Conread position: 279-442
Cow position: chrX:4750270-4750110 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 56

Conread position: 279-442
Cow position: chrX:8759688-8759851 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 22

Conread position: 279-453
Cow position: chrX:17525805-17525639 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 84

Conread position: 279-454
Cow position: chrX:11589305-11589127 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 106

Conread position: 280-437
Cow position: chrX:40556396-40556240 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 84

Conread position: 280-438
Cow position: chrX:6640490-6640648 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 54

Conread position: 280-438
Cow position: chrX:34270624-34270785 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 108

Conread position: 280-442
Cow position: chrX:42086890-42087054 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 133

Conread position: 280-445
Cow position: chrX:1938077-1938244 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 80

Conread position: 280-454
Cow position: chrX:10278933-10279115 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 143

Conread position: 280-454
Cow position: chrX:32215291-32215469 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 280-454
Cow position: chrX:39642559-39642387 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 39

Conread position: 280-456
Cow position: chrX:51838-51661 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 80

Conread position: 280-456
Cow position: chrX:16801200-16801026 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 34

Conread position: 281-442
Cow position: chrX:9451409-9451569 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 45

Conread position: 282-455
Cow position: chrX:14135743-14135916 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 82

Conread position: 285-440
Cow position: chrX:48574289-48574128 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 285-442
Cow position: chrX:40648963-40649130 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 285-442
Cow position: chrX:41215390-41215551 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 285-456
Cow position: chrX:45044520-45044695 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 170

Conread position: 286-456
Cow position: chrX:11674178-11674353 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 167

Conread position: 287-430
Cow position: chrX:11813143-11813290 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 287-438
Cow position: chrX:3494975-3494826 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 13

Conread position: 287-441
Cow position: chrX:33678403-33678243 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 287-442
Cow position: chrX:4602868-4602710 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 287-454
Cow position: chrX:37717794-37717960 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 11

Conread position: 287-456
Cow position: chrX:30789461-30789288 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 165

Conread position: 288-456
Cow position: chrX:41454883-41454712 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 163

Conread position: 289-442
Cow position: chrX:29682039-29681890 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 82

Conread position: 289-442
Cow position: chrX:45657868-45657707 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 289-456
Cow position: chrX:16770136-16770307 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 289-456
Cow position: chrX:34194009-34193838 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 291-442
Cow position: chrX:35029852-35029708 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 81

Conread position: 292-425
Cow position: chrX:25049026-25048891 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 292-438
Cow position: chrX:4486949-4486800 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 70

Conread position: 292-439
Cow position: chrX:1571514-1571371 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 71

Conread position: 292-445
Cow position: chrX:3542931-3543096 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 292-456
Cow position: chrX:42506874-42506704 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 293-445
Cow position: chrX:34108282-34108127 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 293-455
Cow position: chrX:46893176-46893340 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 140

Conread position: 298-438
Cow position: chrX:43028314-43028453 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 64

Conread position: 298-442
Cow position: chrX:35509597-35509452 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 64

Conread position: 298-448
Cow position: chrX:17929083-17929232 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 68

Conread position: 298-456
Cow position: chrX:42516048-42515887 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 299-442
Cow position: chrX:31279841-31279699 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 72

Conread position: 299-456
Cow position: chrX:11670769-11670929 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 300-442
Cow position: chrX:37176958-37177095 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 71

Conread position: 302-453
Cow position: chrX:1996366-1996212 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 303-442
Cow position: chrX:17744711-17744849 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 59

Conread position: 305-445
Cow position: chrX:39887125-39886981 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 307-454
Cow position: chrX:42165523-42165379 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 54

Conread position: 309-448
Cow position: chrX:10479842-10479987 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 312-445
Cow position: chrX:42159037-42159173 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 315-437
Cow position: chrX:42216532-42216410 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 55

Conread position: 318-442
Cow position: chrX:41194007-41194133 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 16

Conread position: 318-456
Cow position: chrX:783546-783689 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 321-456
Cow position: chrX:40457455-40457320 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 58

Conread position: 322-455
Cow position: chrX:38727032-38726905 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 40

Conread position: 322-456
Cow position: chrX:6855965-6856101 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 128

Conread position: 331-442
Cow position: chrX:19162016-19161902 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 332-454
Cow position: chrX:23185222-23185097 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 336-444
Cow position: chrX:15534091-15533980 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.