Cow genome map


           Conread name:
           Ss1.1-uFN-UNL-P-FN-bn-h-05-0-UNL.s1.3.5
        

               Conread position:
               2427-2905
               

               Cow position:
               chr1:96226401-96225928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 109
               

               Conread position:
               2494-2873
               

               Cow position:
               chr1:50899373-50898987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 201
               

               Conread position:
               2539-2828
               

               Cow position:
               chr1:79869304-79869592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               2552-2872
               

               Cow position:
               chr1:78754600-78754913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               118, 87
               

               Conread position:
               2552-2874
               

               Cow position:
               chr1:93693398-93693071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               84, 41
               

               Conread position:
               2560-2828
               

               Cow position:
               chr1:79931950-79932223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               2562-2770
               

               Cow position:
               chr1:78199923-78200136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2579-2764
               

               Cow position:
               chr1:94744384-94744199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               2595-2867
               

               Cow position:
               chr1:62266065-62266343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 83
               

               Conread position:
               2614-2867
               

               Cow position:
               chr1:1026158-1026416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               2634-2876
               

               Cow position:
               chr1:81959036-81959275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               2634-2876
               

               Cow position:
               chr1:89052274-89052030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 98
               
Show alignments to all cow chromosomes.