Cow genome map


           Conread name:
           Ss1.1-uFN-UNL-P-FN-bn-h-05-0-UNL.s1.3.5
        

               Conread position:
               2422-2874
               

               Cow position:
               chr25:13401011-13400548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 168
               

               Conread position:
               2424-2897
               

               Cow position:
               chr25:21134649-21134163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 224
               

               Conread position:
               2425-2642
               

               Cow position:
               chr25:21517300-21517524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               2426-2751
               

               Cow position:
               chr25:6058354-6058030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               72, 118
               

               Conread position:
               2542-2864
               

               Cow position:
               chr25:16762180-16761861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               2546-2862
               

               Cow position:
               chr25:10728660-10728338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 53
               

               Conread position:
               2551-2780
               

               Cow position:
               chr25:30074848-30074615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               2634-2875
               

               Cow position:
               chr25:23549150-23548910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               2635-2876
               

               Cow position:
               chr25:20279416-20279174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               2638-2864
               

               Cow position:
               chr25:20139131-20139358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 5
               
Show alignments to all cow chromosomes.