Cow genome map
| Conread name: | Ss1.1-uFN-UNL-P-FN-cp-e-12-0-UNL.s1.3 |
| Conread position: | 1-177 |
| Cow position: | chr10:9010039-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 111 |
| Conread position: | 1-503 |
| Cow position: | chr10:21939131-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 271 |
| Conread position: | 1-559 |
| Cow position: | chr10:21939369-21938824 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 1-572 |
| Cow position: | chr10:8996563-8995989 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 3-302 |
| Cow position: | chr10:9031364-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 3-456 |
| Cow position: | chr10:9010289-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 96 |
| Conread position: | 3-463 |
| Cow position: | chr10:9031681-9032141 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 3-559 |
| Cow position: | chr10:9010457-9009900 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 3-563 |
| Cow position: | chr10:8996729-8996168 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 5-555 |
| Cow position: | chr10:21939211-21938662 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 459 |
| Conread position: | 33-558 |
| Cow position: | chr10:9010511-9009985 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 33-563 |
| Cow position: | chr10:8996783-8996252 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 43-558 |
| Cow position: | chr10:9010583-9010069 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 20 |
| Conread position: | 49-559 |
| Cow position: | chr10:8996851-8996340 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 72-523 |
| Cow position: | chr10:21939228-21938776 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 378 |
| Conread position: | 77-543 |
| Cow position: | chr10:9031671-9032137 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 321 |
| Conread position: | 121-563 |
| Cow position: | chr10:8996863-8996420 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 122-554 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 162-563 |
| Cow position: | chr10:21939376-21938988 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 152 |
| Conread position: | 202-558 |
| Cow position: | chr10:9031228-9031584 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 211-558 |
| Cow position: | chr10:9010584-9010237 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 251-563 |
| Cow position: | chr10:8996900-8996588 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-563 |
| Cow position: | chr10:9031235-9031505 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 321-544 |
| Cow position: | chr10:9031664-9031888 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 150, 0 |
Show alignments to all cow chromosomes.