Cow genome map
| Conread name: | Ss1.1-uFN-UNL-P-FN-cp-e-12-0-UNL.s1.3 |
| Conread position: | 1-558 |
| Cow position: | chr2:82799474-82800032 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 426 |
| Conread position: | 1-558 |
| Cow position: | chr2:82799558-82800116 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 1-559 |
| Cow position: | chr2:78755534-78756092 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 164, 127 |
| Conread position: | 3-514 |
| Cow position: | chr2:86465804-86466313 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 316 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 168, 404 |
| Conread position: | 3-522 |
| Cow position: | chr2:86465300-86465820 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 3-541 |
| Cow position: | chr2:78754950-78755488 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 184 |
| Conread position: | 5-501 |
| Cow position: | chr2:5874642-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 164, 267 |
| Conread position: | 5-554 |
| Cow position: | chr2:82799898-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 444 |
| Conread position: | 5-559 |
| Cow position: | chr2:5875146-5874591 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 349 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 240 |
| Conread position: | 22-563 |
| Cow position: | chr2:82799747-82800289 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 84 |
| Conread position: | 30-513 |
| Cow position: | chr2:86465663-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 305 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 32-393 |
| Cow position: | chr2:48689395-48689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 80 |
| Conread position: | 32-559 |
| Cow position: | chr2:78754491-78755003 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 336 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 139, 156 |
| Conread position: | 33-558 |
| Cow position: | chr2:78755483-78756006 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 30 |
| Conread position: | 33-558 |
| Cow position: | chr2:82799842-82800368 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 394 |
| Conread position: | 33-559 |
| Cow position: | chr2:5874698-5874171 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 33-559 |
| Cow position: | chr2:5874866-5874339 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 138, 416 |
| Conread position: | 33-559 |
| Cow position: | chr2:5875034-5874507 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 123, 130 |
| Conread position: | 33-563 |
| Cow position: | chr2:78754812-78755342 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 33-564 |
| Cow position: | chr2:78755816-78756347 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 138, 298 |
| Conread position: | 36-564 |
| Cow position: | chr2:78755067-78755594 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 38-513 |
| Cow position: | chr2:78754331-78754801 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 133, 112 |
| Conread position: | 38-562 |
| Cow position: | chr2:86465083-86465608 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 42-547 |
| Cow position: | chr2:48689552-48689046 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 45-511 |
| Cow position: | chr2:86465006-86465473 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 47-563 |
| Cow position: | chr2:78754170-78754687 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 11, 273 |
| Conread position: | 47-563 |
| Cow position: | chr2:78755662-78756180 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 125, 134 |
| Conread position: | 54-559 |
| Cow position: | chr2:86465267-86465773 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 78-559 |
| Cow position: | chr2:82799467-82799949 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 349 |
| Conread position: | 161-559 |
| Cow position: | chr2:5875158-5874759 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 266 |
| Conread position: | 162-511 |
| Cow position: | chr2:86464956-86465305 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 110 |
| Conread position: | 162-559 |
| Cow position: | chr2:82799467-82799865 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 200-559 |
| Cow position: | chr2:48689642-48689287 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 208-555 |
| Cow position: | chr2:48689553-48689207 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 235-544 |
| Cow position: | chr2:5875167-5874858 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 36 |
Show alignments to all cow chromosomes.