Cow genome map
| Conread name: | Ss1.1-uFN-UNL-P-FN-cp-e-12-0-UNL.s1.3 |
| Conread position: | 1-558 |
| Cow position: | chr24:17078146-17077588 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 448 |
| Conread position: | 1-563 |
| Cow position: | chr24:17078230-17077667 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 1-564 |
| Cow position: | chr24:17078062-17077498 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 3-404 |
| Cow position: | chr24:17070660-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 3-490 |
| Cow position: | chr24:17035421-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 471 |
| Conread position: | 3-559 |
| Cow position: | chr24:17036345-17035788 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 3-564 |
| Cow position: | chr24:17070492-17071054 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 3-572 |
| Cow position: | chr24:17036093-17035523 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 4-549 |
| Cow position: | chr24:17035672-17035126 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 5-192 |
| Cow position: | chr24:16986465-16986653 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 5-331 |
| Cow position: | chr24:17013199-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 163, 304 |
| Conread position: | 6-563 |
| Cow position: | chr24:17036426-17035868 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 10-480 |
| Cow position: | chr24:17035498-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 148 |
| Conread position: | 10-563 |
| Cow position: | chr24:17035750-17035196 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 15-563 |
| Cow position: | chr24:17036582-17036036 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 35 |
| Conread position: | 16-563 |
| Cow position: | chr24:17035576-17035028 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 411 |
| Conread position: | 19-563 |
| Cow position: | chr24:17036245-17035700 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 414 |
| Conread position: | 33-563 |
| Cow position: | chr24:17035895-17035364 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 33-563 |
| Cow position: | chr24:17036483-17035952 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 37-429 |
| Cow position: | chr24:17013147-17013538 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 360 |
| Conread position: | 57-278 |
| Cow position: | chr24:16986433-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 64-563 |
| Cow position: | chr24:17036617-17036120 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 117-563 |
| Cow position: | chr24:17070438-17070885 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 415 |
| Conread position: | 120-362 |
| Cow position: | chr24:16986412-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 121-495 |
| Cow position: | chr24:17013147-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 166-558 |
| Cow position: | chr24:17070405-17070796 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 204-564 |
| Cow position: | chr24:17013147-17013507 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-559 |
| Cow position: | chr24:17070399-17070713 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 317-524 |
| Cow position: | chr24:16986442-16986649 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 318-563 |
| Cow position: | chr24:17070388-17070633 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.