Cow genome map
| Conread name: | Ss1.1-uFN-UNL-P-FN-cp-e-12-0-UNL.s1.3 |
| Conread position: | 1-511 |
| Cow position: | chr3:20194753-20195264 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 2-563 |
| Cow position: | chr3:68045717-68046279 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 3-540 |
| Cow position: | chr3:68045802-68046340 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 106 |
| Conread position: | 3-563 |
| Cow position: | chr3:68027125-68027686 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 451 |
| Conread position: | 6-226 |
| Cow position: | chr3:62721785-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 6-563 |
| Cow position: | chr3:62742482-62743031 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 159 |
| Conread position: | 15-562 |
| Cow position: | chr3:62722112-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 19-558 |
| Cow position: | chr3:62722276-62721736 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 19-559 |
| Cow position: | chr3:62722192-62721651 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 19-559 |
| Cow position: | chr3:62742911-62743430 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 21-558 |
| Cow position: | chr3:77351106-77350578 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 22-514 |
| Cow position: | chr3:68045653-68046146 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 22-563 |
| Cow position: | chr3:68027060-68027602 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 516 |
| Conread position: | 23-543 |
| Cow position: | chr3:62742415-62742932 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 223 |
| Conread position: | 27-564 |
| Cow position: | chr3:62742336-62742868 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 30-458 |
| Cow position: | chr3:20194866-20195295 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 30-542 |
| Cow position: | chr3:77351180-77350678 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 202, 81 |
| Conread position: | 33-563 |
| Cow position: | chr3:62742756-62743266 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 251 |
| Conread position: | 38-467 |
| Cow position: | chr3:68045921-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 39-537 |
| Cow position: | chr3:68027245-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 388 |
| Conread position: | 44-559 |
| Cow position: | chr3:62742269-62742779 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 46-392 |
| Cow position: | chr3:77350922-77350576 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 64 |
| Conread position: | 56-559 |
| Cow position: | chr3:62722323-62721819 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 75-551 |
| Cow position: | chr3:62743034-62743506 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 82 |
| Conread position: | 108-510 |
| Cow position: | chr3:68026978-68027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 112-563 |
| Cow position: | chr3:77351182-77350738 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 144-513 |
| Cow position: | chr3:20194728-20195098 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 213 |
| Conread position: | 186-563 |
| Cow position: | chr3:62722360-62721983 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 197-563 |
| Cow position: | chr3:68026984-68027350 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 197-563 |
| Cow position: | chr3:68045577-68045943 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 318, 331 |
| Conread position: | 211-470 |
| Cow position: | chr3:16020466-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 296-509 |
| Cow position: | chr3:16020465-16020259 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 157, 62 |
| Conread position: | 327-563 |
| Cow position: | chr3:62722387-62722151 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 353-559 |
| Cow position: | chr3:68045565-68045771 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 81 |
| Conread position: | 362-550 |
| Cow position: | chr3:62742252-62742439 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
Show alignments to all cow chromosomes.