Cow genome map
Conread name: | Ss1.1-uFN-UNL-P-FN-cp-e-12-0-UNL.s1.3 |
Conread position: | 1-361 |
Cow position: | chr6:49429183-49429542 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 241 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 155, 160 |
Conread position: | 1-506 |
Cow position: | chr6:49396492-49396998 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 72 |
Conread position: | 1-513 |
Cow position: | chr6:49429015-49429526 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 107 |
Conread position: | 1-559 |
Cow position: | chr6:49428259-49428818 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 104 |
Conread position: | 1-559 |
Cow position: | chr6:49428511-49429070 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 1-563 |
Cow position: | chr6:49340855-49341418 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 0 |
Conread position: | 5-502 |
Cow position: | chr6:49362458-49362948 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 309 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 5-549 |
Cow position: | chr6:49396166-49396705 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 65 |
Conread position: | 5-558 |
Cow position: | chr6:49396412-49396966 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 91 |
Conread position: | 5-559 |
Cow position: | chr6:49428599-49429154 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 5-563 |
Cow position: | chr6:49396328-49396887 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 236 |
Conread position: | 6-563 |
Cow position: | chr6:49340524-49341082 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 197 |
Conread position: | 12-513 |
Cow position: | chr6:49340362-49340864 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 94 |
Conread position: | 19-563 |
Cow position: | chr6:49396258-49396803 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 518 |
Conread position: | 21-563 |
Cow position: | chr6:49340791-49341334 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 21-564 |
Cow position: | chr6:49428951-49429495 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 97 |
Conread position: | 24-563 |
Cow position: | chr6:49428785-49429326 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 95 |
Conread position: | 29-563 |
Cow position: | chr6:49396106-49396635 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 76 |
Conread position: | 32-522 |
Cow position: | chr6:49428374-49428865 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 41 |
Conread position: | 33-507 |
Cow position: | chr6:49362402-49362865 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 306 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 85, 73 |
Conread position: | 33-513 |
Cow position: | chr6:49340971-49341451 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 469 |
Conread position: | 33-558 |
Cow position: | chr6:49340635-49341161 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 33-563 |
Cow position: | chr6:49340467-49340998 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 244 |
Conread position: | 45-550 |
Cow position: | chr6:49362330-49362824 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 321 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 73, 55 |
Conread position: | 46-559 |
Cow position: | chr6:49395785-49396295 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 310 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 17, 71 |
Conread position: | 51-513 |
Cow position: | chr6:49428224-49428688 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 67 |
Conread position: | 100-558 |
Cow position: | chr6:49340366-49340825 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 108-563 |
Cow position: | chr6:49340134-49340578 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 281 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 69, 220 |
Conread position: | 127-530 |
Cow position: | chr6:49362328-49362721 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 265 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 46, 302 |
Conread position: | 128-549 |
Cow position: | chr6:49428217-49428640 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 272 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 13, 326 |
Conread position: | 178-559 |
Cow position: | chr6:49340361-49340742 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 32 |
Show alignments to all cow chromosomes.