Cow genome map
| Conread name: | Ss1.1-uFN-UNL-P-FN-cp-e-12-0-UNL.s1.3 |
| Conread position: | 1-542 |
| Cow position: | chr8:46816832-46817374 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 117 |
| Conread position: | 1-558 |
| Cow position: | chr8:46816412-46816970 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 271 |
| Conread position: | 1-559 |
| Cow position: | chr8:48407095-48406536 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 351 |
| Conread position: | 3-381 |
| Cow position: | chr8:6957963-6957587 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 168, 179 |
| Conread position: | 3-469 |
| Cow position: | chr8:55581275-55581742 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 444 |
| Conread position: | 3-470 |
| Cow position: | chr8:46816918-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 3-513 |
| Cow position: | chr8:45201051-45201562 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 101 |
| Conread position: | 3-552 |
| Cow position: | chr8:48406841-48406291 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 3-563 |
| Cow position: | chr8:45201135-45201696 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 3-563 |
| Cow position: | chr8:55580855-55581416 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 4-556 |
| Cow position: | chr8:55581108-55581661 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 286 |
| Conread position: | 4-562 |
| Cow position: | chr8:55581192-55581751 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 4-563 |
| Cow position: | chr8:48407428-48406868 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 109 |
| Conread position: | 5-559 |
| Cow position: | chr8:48407343-48406788 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 422 |
| Conread position: | 5-563 |
| Cow position: | chr8:46816332-46816891 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 267 |
| Conread position: | 5-563 |
| Cow position: | chr8:48406923-48406364 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 6-563 |
| Cow position: | chr8:45201306-45201864 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 6-564 |
| Cow position: | chr8:45201642-45202192 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 325 |
| Conread position: | 10-558 |
| Cow position: | chr8:48407506-48406957 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 262 |
| Conread position: | 10-563 |
| Cow position: | chr8:55580778-55581332 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 11-559 |
| Cow position: | chr8:46816002-46816551 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 261 |
| Conread position: | 14-558 |
| Cow position: | chr8:48407673-48407125 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 15-563 |
| Cow position: | chr8:55581035-55581584 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 423 |
| Conread position: | 19-483 |
| Cow position: | chr8:48407245-48406780 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 23-562 |
| Cow position: | chr8:45201407-45201947 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 509 |
| Conread position: | 33-504 |
| Cow position: | chr8:45201501-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 239 |
| Conread position: | 33-563 |
| Cow position: | chr8:46816276-46816807 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 239 |
| Conread position: | 33-563 |
| Cow position: | chr8:46816528-46817059 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 239 |
| Conread position: | 33-563 |
| Cow position: | chr8:46816780-46817311 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 33-563 |
| Cow position: | chr8:48407147-48406616 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 410 |
| Conread position: | 36-563 |
| Cow position: | chr8:45201000-45201528 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 37-559 |
| Cow position: | chr8:45200917-45201440 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 125 |
| Conread position: | 37-563 |
| Cow position: | chr8:46816196-46816723 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 45-563 |
| Cow position: | chr8:48407555-48407036 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 382 |
| Conread position: | 50-563 |
| Cow position: | chr8:46815957-46816471 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 222 |
| Conread position: | 53-553 |
| Cow position: | chr8:48406707-48406197 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 53 |
| Conread position: | 116-559 |
| Cow position: | chr8:45200828-45201272 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 52, 323 |
| Conread position: | 121-563 |
| Cow position: | chr8:48407647-48407204 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 150-563 |
| Cow position: | chr8:45200778-45201192 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 161-505 |
| Cow position: | chr8:6958057-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 193 |
| Conread position: | 182-563 |
| Cow position: | chr8:48407672-48407288 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 353 |
| Conread position: | 231-559 |
| Cow position: | chr8:6958069-6957743 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 294-559 |
| Cow position: | chr8:55580727-55580992 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.