Cow genome map

Conread name: Ss1.1-unkn-10-3_1D09.5

Conread position: 1-104
Cow position: chr1:81673861-81673758 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr1:83943553-83943672 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr1:96019069-96018946 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-131
Cow position: chr1:75093291-75093161 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr1:3963416-3963284 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 1-135
Cow position: chr1:23488716-23488847 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-136
Cow position: chr1:1877824-1877689 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 65, 107

Conread position: 1-136
Cow position: chr1:81913355-81913487 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 1-136
Cow position: chr1:91066352-91066486 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 21

Conread position: 1-137
Cow position: chr1:3456669-3456533 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-137
Cow position: chr1:21678939-21678804 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-137
Cow position: chr1:56229051-56228913 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 1-137
Cow position: chr1:57698657-57698795 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-137
Cow position: chr1:67821413-67821557 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1-138
Cow position: chr1:13210679-13210816 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-138
Cow position: chr1:20950492-20950358 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 1-138
Cow position: chr1:22628841-22628979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 1-138
Cow position: chr1:50032441-50032307 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 1-138
Cow position: chr1:60665290-60665154 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 1-138
Cow position: chr1:88029080-88028951 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 1-138
Cow position: chr1:98494223-98494090 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1-139
Cow position: chr1:4374542-4374679 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 1-139
Cow position: chr1:60032802-60032943 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 12

Conread position: 1-139
Cow position: chr1:60829382-60829520 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-139
Cow position: chr1:65067155-65067293 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-139
Cow position: chr1:73442823-73442961 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 28

Conread position: 1-139
Cow position: chr1:76222894-76223032 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-139
Cow position: chr1:79406282-79406420 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-139
Cow position: chr1:82861571-82861432 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 120
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 1-139
Cow position: chr1:89742215-89742353 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-145
Cow position: chr1:22826966-22826819 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-145
Cow position: chr1:47543468-47543324 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 140, 57

Conread position: 1-145
Cow position: chr1:71946574-71946712 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 28

Conread position: 1-146
Cow position: chr1:15311665-15311518 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 1-146
Cow position: chr1:29662504-29662648 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 137, 57

Conread position: 1-146
Cow position: chr1:31399429-31399573 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 61

Conread position: 1-146
Cow position: chr1:36613478-36613624 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 1-146
Cow position: chr1:54258364-54258223 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 140, 57

Conread position: 1-146
Cow position: chr1:59019571-59019424 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 1-146
Cow position: chr1:61735642-61735791 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 1-146
Cow position: chr1:77836457-77836598 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 22

Conread position: 1-148
Cow position: chr1:7233113-7232968 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 1-148
Cow position: chr1:23623961-23623804 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-149
Cow position: chr1:37309714-37309862 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 16

Conread position: 1-150
Cow position: chr1:2169723-2169873 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 1-151
Cow position: chr1:52354618-52354768 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position: chr1:88562508-88562658 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 138, 34

Conread position: 1-151
Cow position: chr1:96559138-96558988 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 23

Conread position: 1-157
Cow position: chr1:57087453-57087609 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 28

Conread position: 1-162
Cow position: chr1:17707578-17707412 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 49

Conread position: 1-162
Cow position: chr1:53579109-53578947 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 1-162
Cow position: chr1:85151382-85151545 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 2-93
Cow position: chr1:98380781-98380872 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-100
Cow position: chr1:71748211-71748306 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 2-103
Cow position: chr1:61175979-61175878 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-110
Cow position: chr1:61304477-61304369 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-111
Cow position: chr1:91370680-91370789 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-112
Cow position: chr1:73561854-73561963 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-116
Cow position: chr1:34000701-34000578 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 2-116
Cow position: chr1:41056480-41056366 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-116
Cow position: chr1:61149737-61149851 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 56

Conread position: 2-116
Cow position: chr1:69445167-69445056 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 2-117
Cow position: chr1:98412737-98412625 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 2-119
Cow position: chr1:80988142-80988028 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 2-120
Cow position: chr1:21560747-21560633 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 2-120
Cow position: chr1:81859436-81859549 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 2-123
Cow position: chr1:37886991-37887111 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 2-123
Cow position: chr1:39418323-39418443 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 2-123
Cow position: chr1:99039683-99039804 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-124
Cow position: chr1:100791532-100791653 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 2-127
Cow position: chr1:7022254-7022130 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 2-129
Cow position: chr1:31190308-31190435 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-130
Cow position: chr1:38418871-38418746 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 2-130
Cow position: chr1:52036646-52036776 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 2-131
Cow position: chr1:60986767-60986636 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 2-132
Cow position: chr1:61564588-61564460 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 57

Conread position: 2-133
Cow position: chr1:3739795-3739664 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-133
Cow position: chr1:8659444-8659313 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-133
Cow position: chr1:24201943-24202071 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 2-133
Cow position: chr1:90976503-90976631 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 2-134
Cow position: chr1:43352855-43352985 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 2-134
Cow position: chr1:43893721-43893592 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 2-134
Cow position: chr1:45289078-45289207 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 2-134
Cow position: chr1:48105638-48105772 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 2-134
Cow position: chr1:53595121-53594989 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-134
Cow position: chr1:73756889-73756760 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 2-135
Cow position: chr1:23634105-23634234 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 2-135
Cow position: chr1:40062244-40062111 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 2-135
Cow position: chr1:56719113-56718978 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 118
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 124

Conread position: 2-135
Cow position: chr1:69264617-69264485 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 2-136
Cow position: chr1:71797104-71797235 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 2-136
Cow position: chr1:82880461-82880327 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-136
Cow position: chr1:95499700-95499833 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:1981314-1981450 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 90

Conread position: 2-137
Cow position: chr1:3657571-3657705 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 2-137
Cow position: chr1:3720631-3720765 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 26

Conread position: 2-137
Cow position: chr1:8349515-8349646 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 2-137
Cow position: chr1:11873561-11873694 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:24133260-24133390 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:24235725-24235857 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 2-137
Cow position: chr1:26322713-26322850 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 117
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 2-137
Cow position: chr1:29657677-29657543 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:31499423-31499288 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-137
Cow position: chr1:36997988-36997858 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 2-137
Cow position: chr1:37646476-37646611 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-137
Cow position: chr1:41138559-41138692 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 2-137
Cow position: chr1:44836434-44836571 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 26

Conread position: 2-137
Cow position: chr1:45244304-45244171 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-137
Cow position: chr1:53207899-53208034 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-137
Cow position: chr1:53374231-53374095 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 118
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 2-137
Cow position: chr1:54294865-54295003 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 2-137
Cow position: chr1:55163718-55163586 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 2-137
Cow position: chr1:57541705-57541838 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 2-137
Cow position: chr1:57957062-57957198 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 2-137
Cow position: chr1:61005770-61005901 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 2-137
Cow position: chr1:66355913-66356048 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 26

Conread position: 2-137
Cow position: chr1:67014179-67014047 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:68253387-68253252 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 115
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 2-137
Cow position: chr1:72304575-72304708 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 2-137
Cow position: chr1:79844264-79844130 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:80183943-80184079 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 2-137
Cow position: chr1:82936786-82936923 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 2-137
Cow position: chr1:88338491-88338358 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 2-137
Cow position: chr1:90868640-90868777 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-137
Cow position: chr1:92963194-92963051 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 2-137
Cow position: chr1:94212029-94211895 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 2-137
Cow position: chr1:95215390-95215515 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-137
Cow position: chr1:97422500-97422636 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 2-137
Cow position: chr1:98577273-98577140 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 44

Conread position: 2-137
Cow position: chr1:100400406-100400537 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 2-137
Cow position: chr1:101551253-101551118 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-137
Cow position: chr1:101713913-101713776 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 86

Conread position: 2-138
Cow position: chr1:8418-8283 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 2-138
Cow position: chr1:1801935-1801807 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 2-138
Cow position: chr1:2075532-2075667 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 2-138
Cow position: chr1:6760222-6760357 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 2-138
Cow position: chr1:11914082-11914212 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 2-138
Cow position: chr1:15547264-15547129 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 2-138
Cow position: chr1:35685860-35685996 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-138
Cow position: chr1:45007262-45007130 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 2-138
Cow position: chr1:51359042-51359175 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 57

Conread position: 2-138
Cow position: chr1:55260635-55260770 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 116
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 2-138
Cow position: chr1:69941169-69941305 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 71

Conread position: 2-138
Cow position: chr1:71676101-71676237 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-138
Cow position: chr1:72104942-72104807 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 2-138
Cow position: chr1:76938201-76938337 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 2-138
Cow position: chr1:77620346-77620206 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 2-138
Cow position: chr1:86113617-86113753 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-138
Cow position: chr1:91816978-91817111 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 115
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 2-138
Cow position: chr1:93499418-93499283 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 89

Conread position: 2-138
Cow position: chr1:96184212-96184348 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-138
Cow position: chr1:96964116-96963979 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 2-139
Cow position: chr1:11772285-11772422 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 2-139
Cow position: chr1:12419662-12419800 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 21

Conread position: 2-139
Cow position: chr1:22467726-22467587 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 2-139
Cow position: chr1:22730557-22730421 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 2-139
Cow position: chr1:28679085-28678951 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 2-139
Cow position: chr1:31548632-31548497 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 2-139
Cow position: chr1:42053528-42053666 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 2-139
Cow position: chr1:52384483-52384622 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 2-139
Cow position: chr1:57305628-57305490 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 2-139
Cow position: chr1:63390978-63391113 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 2-139
Cow position: chr1:71325451-71325588 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-139
Cow position: chr1:71691610-71691473 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 117
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-139
Cow position: chr1:72035133-72035270 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-139
Cow position: chr1:79632301-79632438 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-139
Cow position: chr1:83082797-83082663 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 7

Conread position: 2-139
Cow position: chr1:84456633-84456498 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 2-139
Cow position: chr1:85596740-85596610 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 27

Conread position: 2-139
Cow position: chr1:101634497-101634364 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 2-141
Cow position: chr1:20384825-20384968 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 2-144
Cow position: chr1:31934309-31934160 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 2-144
Cow position: chr1:74822247-74822103 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 2-144
Cow position: chr1:98561895-98561752 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 27

Conread position: 2-144
Cow position: chr1:98562956-98562813 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 27

Conread position: 2-145
Cow position: chr1:22728843-22728701 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 137, 56

Conread position: 2-145
Cow position: chr1:42175359-42175212 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 2-145
Cow position: chr1:42874151-42874295 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 137, 0

Conread position: 2-145
Cow position: chr1:44155058-44154919 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 64

Conread position: 2-145
Cow position: chr1:52039432-52039289 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 137, 26

Conread position: 2-145
Cow position: chr1:55585800-55585951 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 22

Conread position: 2-145
Cow position: chr1:70380350-70380503 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 2-145
Cow position: chr1:81355908-81356051 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 135, 26

Conread position: 2-145
Cow position: chr1:99136635-99136778 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 137, 16

Conread position: 2-146
Cow position: chr1:3323654-3323505 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 61

Conread position: 2-146
Cow position: chr1:4589685-4589829 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 139, 132

Conread position: 2-146
Cow position: chr1:4662261-4662400 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 92

Conread position: 2-146
Cow position: chr1:5289259-5289112 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 2-146
Cow position: chr1:8532417-8532563 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 2-146
Cow position: chr1:10719689-10719839 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-146
Cow position: chr1:19971039-19971175 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 139, 50

Conread position: 2-146
Cow position: chr1:20125407-20125263 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 122
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 57

Conread position: 2-146
Cow position: chr1:21460663-21460521 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 138, 35

Conread position: 2-146
Cow position: chr1:22637598-22637741 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 83

Conread position: 2-146
Cow position: chr1:31765601-31765743 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 20

Conread position: 2-146
Cow position: chr1:33717017-33716872 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 2-146
Cow position: chr1:34159627-34159486 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 26

Conread position: 2-146
Cow position: chr1:35769239-35769097 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 139, 68

Conread position: 2-146
Cow position: chr1:43380233-43380372 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 139, 67

Conread position: 2-146
Cow position: chr1:46693860-46694005 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 2-146
Cow position: chr1:52329733-52329876 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 45

Conread position: 2-146
Cow position: chr1:52753370-52753515 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 123
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 2-146
Cow position: chr1:63596264-63596408 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 101

Conread position: 2-146
Cow position: chr1:68282592-68282445 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 2-146
Cow position: chr1:72069031-72069175 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 138, 112

Conread position: 2-146
Cow position: chr1:72813211-72813066 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 125
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 138, 0

Conread position: 2-146
Cow position: chr1:80336451-80336599 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 2-146
Cow position: chr1:83185046-83184904 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 137, 68

Conread position: 2-146
Cow position: chr1:85361651-85361506 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 122
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 0

Conread position: 2-146
Cow position: chr1:102647473-102647618 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 2-147
Cow position: chr1:48444387-48444528 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 22

Conread position: 2-148
Cow position: chr1:82378590-82378446 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 26

Conread position: 2-148
Cow position: chr1:95176731-95176585 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-148
Cow position: chr1:98618712-98618565 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 128
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 2-149
Cow position: chr1:10778369-10778221 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 26

Conread position: 2-149
Cow position: chr1:13548194-13548345 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 2-149
Cow position: chr1:21092887-21092740 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 139, 73

Conread position: 2-149
Cow position: chr1:25183921-25183771 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 2-149
Cow position: chr1:31341258-31341406 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 2-149
Cow position: chr1:43822172-43822025 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 137, 26

Conread position: 2-149
Cow position: chr1:62337837-62337982 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 21

Conread position: 2-149
Cow position: chr1:70297067-70296916 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 53

Conread position: 2-149
Cow position: chr1:71045550-71045399 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 26

Conread position: 2-149
Cow position: chr1:100816337-100816191 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 26

Conread position: 2-150
Cow position: chr1:20204822-20204672 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 2-150
Cow position: chr1:78783342-78783193 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 125
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 139, 0

Conread position: 2-151
Cow position: chr1:4368289-4368439 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 2-151
Cow position: chr1:34283844-34283994 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 2-151
Cow position: chr1:48731032-48731184 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 49

Conread position: 2-151
Cow position: chr1:53308597-53308746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 137, 26

Conread position: 2-151
Cow position: chr1:53520702-53520558 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 48

Conread position: 2-151
Cow position: chr1:55429188-55429337 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 139, 77

Conread position: 2-151
Cow position: chr1:61350943-61350799 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 138, 51

Conread position: 2-151
Cow position: chr1:79590896-79590746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 129
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 139, 0

Conread position: 2-151
Cow position: chr1:81290314-81290167 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 137, 64

Conread position: 2-151
Cow position: chr1:89349773-89349628 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 98

Conread position: 2-152
Cow position: chr1:51981023-51980872 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 28, 22

Conread position: 2-152
Cow position: chr1:89835029-89834880 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 22

Conread position: 2-153
Cow position: chr1:42256714-42256866 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 21

Conread position: 2-155
Cow position: chr1:36880074-36879921 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 2-156
Cow position: chr1:36920837-36920982 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 2-162
Cow position: chr1:18023518-18023673 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 20

Conread position: 2-162
Cow position: chr1:41181640-41181476 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 102

Conread position: 2-162
Cow position: chr1:100421639-100421477 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 54

Conread position: 2-164
Cow position: chr1:13056733-13056899 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 26

Conread position: 2-167
Cow position: chr1:22221064-22221229 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 138, 11

Conread position: 3-109
Cow position: chr1:18937039-18937144 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 3-112
Cow position: chr1:88652425-88652317 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 3-117
Cow position: chr1:84282854-84282742 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 3-118
Cow position: chr1:732130-732245 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr1:11226451-11226567 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 3-129
Cow position: chr1:90836209-90836334 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 3-133
Cow position: chr1:73960496-73960365 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 3-135
Cow position: chr1:82406758-82406893 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 3-137
Cow position: chr1:51968264-51968131 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 3-137
Cow position: chr1:53424982-53424853 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-137
Cow position: chr1:69695214-69695345 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 3-137
Cow position: chr1:79002159-79002292 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 3-137
Cow position: chr1:81569240-81569375 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 3-137
Cow position: chr1:89344704-89344570 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-137
Cow position: chr1:92370566-92370696 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 3-138
Cow position: chr1:22823732-22823600 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 3-138
Cow position: chr1:24909300-24909431 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 3-138
Cow position: chr1:46885889-46885752 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 3-138
Cow position: chr1:57255120-57254985 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-138
Cow position: chr1:68276201-68276067 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 3-138
Cow position: chr1:97284582-97284715 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 3-138
Cow position: chr1:101915961-101915829 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-139
Cow position: chr1:11853895-11854031 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr1:21508182-21508050 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 3-139
Cow position: chr1:34300753-34300889 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr1:96928470-96928605 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 3-139
Cow position: chr1:97231770-97231635 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 3-139
Cow position: chr1:101822703-101822838 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 25

Conread position: 3-146
Cow position: chr1:2317848-2317987 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 137, 29

Conread position: 3-146
Cow position: chr1:17876195-17876339 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 26

Conread position: 3-146
Cow position: chr1:56426305-56426159 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 3-146
Cow position: chr1:94226753-94226897 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 3-146
Cow position: chr1:94526289-94526146 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 87

Conread position: 3-148
Cow position: chr1:61725318-61725463 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-148
Cow position: chr1:69539493-69539346 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 20

Conread position: 3-149
Cow position: chr1:4441311-4441454 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 136, 25

Conread position: 3-149
Cow position: chr1:21787121-21786971 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 3-149
Cow position: chr1:56225270-56225126 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 25

Conread position: 3-149
Cow position: chr1:82504761-82504615 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 25

Conread position: 3-151
Cow position: chr1:54179467-54179319 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 122

Conread position: 3-151
Cow position: chr1:81180185-81180339 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 3-151
Cow position: chr1:100812984-100813133 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 3-173
Cow position: chr1:5873177-5873346 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 25

Conread position: 4-135
Cow position: chr1:30034340-30034212 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 4-138
Cow position: chr1:61391998-61392133 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 24

Conread position: 4-139
Cow position: chr1:54199589-54199721 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 4-140
Cow position: chr1:97778647-97778514 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 4-145
Cow position: chr1:85028753-85028613 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 10

Conread position: 4-145
Cow position: chr1:102266473-102266619 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 4-146
Cow position: chr1:77648160-77648302 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 91

Conread position: 4-146
Cow position: chr1:95637336-95637193 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 0

Conread position: 4-146
Cow position: chr1:101792304-101792445 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 68

Conread position: 4-151
Cow position: chr1:4026978-4026834 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 136, 30

Conread position: 4-166
Cow position: chr1:99837292-99837456 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 5-120
Cow position: chr1:35162196-35162082 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 5-138
Cow position: chr1:96365468-96365334 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 5-146
Cow position: chr1:55020280-55020138 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 19

Conread position: 5-167
Cow position: chr1:85338920-85338758 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 23

Conread position: 6-137
Cow position: chr1:53495255-53495123 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 6-137
Cow position: chr1:87456740-87456609 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-146
Cow position: chr1:102289405-102289545 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 17

Conread position: 7-137
Cow position: chr1:80869897-80869767 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 7-138
Cow position: chr1:96371581-96371713 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 9-120
Cow position: chr1:57155871-57155982 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 98
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 9-142
Cow position: chr1:52496565-52496432 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-134
Cow position: chr1:43211567-43211443 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 113

Conread position: 10-137
Cow position: chr1:41004579-41004706 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-151
Cow position: chr1:78091820-78091678 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 11-137
Cow position: chr1:91039374-91039498 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 11-146
Cow position: chr1:21551756-21551892 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 12-137
Cow position: chr1:82958268-82958394 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 86, 7

Conread position: 12-146
Cow position: chr1:53539868-53539731 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 12-151
Cow position: chr1:75250021-75249882 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 50

Conread position: 13-130
Cow position: chr1:61876583-61876467 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 13-137
Cow position: chr1:22745412-22745288 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-139
Cow position: chr1:28877140-28877015 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 13-146
Cow position: chr1:83763-83629 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 13-146
Cow position: chr1:63240732-63240603 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 56

Conread position: 14-133
Cow position: chr1:99792571-99792453 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 14-135
Cow position: chr1:66430084-66429964 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 14-138
Cow position: chr1:12143138-12143259 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 14-138
Cow position: chr1:82091936-82091812 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-139
Cow position: chr1:86511945-86511820 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-146
Cow position: chr1:71280249-71280381 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-167
Cow position: chr1:39913240-39913394 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 70

Conread position: 15-135
Cow position: chr1:18208280-18208160 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-137
Cow position: chr1:5562024-5562144 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 15-137
Cow position: chr1:95604794-95604672 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-138
Cow position: chr1:12213704-12213827 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-138
Cow position: chr1:52592814-52592937 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-138
Cow position: chr1:89084450-89084328 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 15-139
Cow position: chr1:7836577-7836701 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-139
Cow position: chr1:32630753-32630634 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 15-139
Cow position: chr1:70865307-70865183 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 15-140
Cow position: chr1:97669154-97669029 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-146
Cow position: chr1:9376337-9376468 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 9

Conread position: 15-146
Cow position: chr1:28012286-28012418 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 15-146
Cow position: chr1:31708649-31708517 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 15-146
Cow position: chr1:52390819-52390951 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 15-146
Cow position: chr1:67006917-67006785 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 15-167
Cow position: chr1:68717200-68717352 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 55

Conread position: 15-189
Cow position: chr1:26186684-26186857 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 134

Conread position: 16-139
Cow position: chr1:12222823-12222946 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 16-146
Cow position: chr1:64062118-64061987 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 17-136
Cow position: chr1:6278241-6278122 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-136
Cow position: chr1:10728127-10728008 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-136
Cow position: chr1:47634661-47634780 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-136
Cow position: chr1:70466354-70466236 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 17-136
Cow position: chr1:86543922-86544041 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-136
Cow position: chr1:91106080-91105961 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-137
Cow position: chr1:19471582-19471702 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-137
Cow position: chr1:63340432-63340551 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 17-137
Cow position: chr1:69770857-69770737 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-137
Cow position: chr1:82480025-82479905 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 17-137
Cow position: chr1:94879041-94879161 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:2219171-2219291 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 17-138
Cow position: chr1:3930078-3930199 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:26811018-26811139 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:30372933-30372812 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:31720268-31720148 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 17-138
Cow position: chr1:37414028-37414149 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:38479600-38479479 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:40265360-40265480 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 17-138
Cow position: chr1:51909843-51909963 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 17-138
Cow position: chr1:64928824-64928945 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:65943179-65943300 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-138
Cow position: chr1:72087626-72087505 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:13404346-13404467 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 17-139
Cow position: chr1:33910406-33910284 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:36645410-36645532 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:55043249-55043370 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 17-139
Cow position: chr1:63049607-63049485 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:63388501-63388623 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:64907982-64907860 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:74929954-74930076 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 17-139
Cow position: chr1:81228551-81228671 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 17-139
Cow position: chr1:100790127-100790249 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-140
Cow position: chr1:81350046-81350169 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-146
Cow position: chr1:831200-831330 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 17-146
Cow position: chr1:1023026-1023156 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 17-146
Cow position: chr1:1028409-1028279 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 17-146
Cow position: chr1:3441005-3440874 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 17-146
Cow position: chr1:3969244-3969374 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 17-146
Cow position: chr1:13451830-13451700 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 17-146
Cow position: chr1:31646995-31646865 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 17-146
Cow position: chr1:31817128-31817258 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 17-146
Cow position: chr1:40578558-40578428 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 17-146
Cow position: chr1:43829455-43829585 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 17-146
Cow position: chr1:47922826-47922956 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 17-146
Cow position: chr1:52170803-52170933 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 17-146
Cow position: chr1:62223965-62223835 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 17-146
Cow position: chr1:63877012-63877143 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 17-146
Cow position: chr1:65480994-65480864 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 17-146
Cow position: chr1:68609737-68609866 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 56

Conread position: 17-146
Cow position: chr1:72115393-72115264 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 59

Conread position: 17-146
Cow position: chr1:74328108-74327978 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 17-146
Cow position: chr1:77177079-77177209 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 17-146
Cow position: chr1:78920968-78921098 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 17-146
Cow position: chr1:82908786-82908915 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 20

Conread position: 17-146
Cow position: chr1:85795989-85795859 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 17-146
Cow position: chr1:88678388-88678256 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 17-146
Cow position: chr1:89089495-89089625 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 17-146
Cow position: chr1:99398658-99398528 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 17-148
Cow position: chr1:80901445-80901577 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 17-151
Cow position: chr1:7685857-7685991 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 6

Conread position: 17-151
Cow position: chr1:32562497-32562632 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 17-151
Cow position: chr1:58340954-58340819 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 17-151
Cow position: chr1:73062618-73062753 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 17-151
Cow position: chr1:76419897-76419762 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 17-151
Cow position: chr1:88983367-88983501 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 6

Conread position: 17-151
Cow position: chr1:94665032-94664897 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 17-152
Cow position: chr1:80356686-80356822 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 17-157
Cow position: chr1:30530993-30531134 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 17-157
Cow position: chr1:91903060-91902921 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 17-157
Cow position: chr1:99223969-99224109 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 17-162
Cow position: chr1:6200350-6200203 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 17-162
Cow position: chr1:82491838-82491693 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 30

Conread position: 17-166
Cow position: chr1:20147459-20147305 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 17-167
Cow position: chr1:6462570-6462723 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 17-167
Cow position: chr1:56412080-56411929 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 6

Conread position: 17-247
Cow position: chr1:47544545-47544318 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 137

Conread position: 18-118
Cow position: chr1:52754362-52754463 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 18-129
Cow position: chr1:8857014-8857125 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-132
Cow position: chr1:26789782-26789668 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-134
Cow position: chr1:12607713-12607829 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-134
Cow position: chr1:91084883-91084999 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-135
Cow position: chr1:97250955-97251071 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 18-136
Cow position: chr1:18638152-18638034 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:21091300-21091182 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:40048225-40048106 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 18-136
Cow position: chr1:44818766-44818882 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 18-136
Cow position: chr1:48638898-48639016 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:51366147-51366029 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:52374817-52374699 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:52850326-52850208 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:69902903-69903021 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:79015430-79015312 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr1:89233992-89234110 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:12283396-12283277 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:12506682-12506800 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 18-137
Cow position: chr1:14084604-14084723 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:21037891-21037772 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:21539244-21539125 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:32796220-32796101 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:34875016-34874897 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:39160631-39160750 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:43973207-43973088 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:59790332-59790451 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:61282051-61281932 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:61330924-61331043 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:63760504-63760623 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:68097115-68097234 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:69997355-69997236 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:71774194-71774313 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:72951260-72951141 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:72963054-72963173 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:76478710-76478591 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr1:79497915-79498034 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-138
Cow position: chr1:23659408-23659288 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-138
Cow position: chr1:72987496-72987376 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-139
Cow position: chr1:4014154-4014275 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-139
Cow position: chr1:20389207-20389086 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 18-139
Cow position: chr1:24411120-24411241 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-139
Cow position: chr1:37243369-37243248 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 18-139
Cow position: chr1:40310786-40310669 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 18-139
Cow position: chr1:49601034-49601163 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 18-139
Cow position: chr1:70068372-70068491 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 18-139
Cow position: chr1:78586238-78586358 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 18-139
Cow position: chr1:79916638-79916761 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 18-140
Cow position: chr1:44955629-44955751 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-141
Cow position: chr1:75935439-75935562 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-144
Cow position: chr1:1263172-1263046 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-145
Cow position: chr1:13298574-13298446 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-145
Cow position: chr1:76859993-76860121 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-145
Cow position: chr1:82884604-82884733 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 18-146
Cow position: chr1:475919-475790 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:2745127-2744998 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 18-146
Cow position: chr1:2951913-2952042 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:2990524-2990395 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:3931599-3931728 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:4563028-4563157 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 18-146
Cow position: chr1:5209504-5209633 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:6657049-6657181 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 18-146
Cow position: chr1:7161778-7161907 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:7197382-7197253 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:7325078-7324949 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:7867813-7867684 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:7892120-7891991 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:8345366-8345495 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:8402512-8402383 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:8470122-8470251 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:8513227-8513356 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:8517030-8517159 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:8744457-8744586 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:8845659-8845530 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:9526606-9526477 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:10119995-10119866 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:10624732-10624603 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:11665500-11665629 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:13131246-13131117 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:13150582-13150453 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:14361882-14361753 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:15417795-15417924 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:15476840-15476969 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:16373089-16372960 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:16820647-16820518 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:17056506-17056377 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:17058130-17058259 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:17247622-17247751 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:17435206-17435335 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:17450387-17450516 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:17457576-17457447 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:19357463-19357334 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:20339477-20339606 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:20340918-20341047 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:20528405-20528276 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:20832920-20832791 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:20845971-20846100 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:20847399-20847271 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 37

Conread position: 18-146
Cow position: chr1:21079399-21079528 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:22546853-22546724 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:22685831-22685702 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:24737226-24737355 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:26588989-26588860 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:26721287-26721416 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:28715076-28714947 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:30236447-30236575 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 64

Conread position: 18-146
Cow position: chr1:30312468-30312339 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:31350731-31350859 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 6

Conread position: 18-146
Cow position: chr1:31405792-31405663 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:31714670-31714799 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:32767882-32768011 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:32960165-32960294 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:33040847-33040718 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:33464231-33464360 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:34197988-34197859 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:34406572-34406443 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:34534282-34534153 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:34820971-34820842 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:36706397-36706526 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:37243662-37243791 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:40059206-40059077 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 56

Conread position: 18-146
Cow position: chr1:40437198-40437327 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:40474103-40473974 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:40766792-40766663 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:41486652-41486523 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 56

Conread position: 18-146
Cow position: chr1:42713801-42713930 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:46121845-46121974 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:46929913-46930042 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:47078141-47078270 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:47418486-47418357 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:48735975-48735846 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:49268921-49268792 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:50357932-50358060 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 119, 87

Conread position: 18-146
Cow position: chr1:50687764-50687635 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:51732287-51732416 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:52068554-52068425 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:52379013-52378884 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:52381483-52381354 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:52941192-52941317 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 52

Conread position: 18-146
Cow position: chr1:53015846-53015717 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:53306972-53306843 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:54174719-54174590 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:54640066-54639937 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:55292602-55292731 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:56204773-56204902 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:56619754-56619883 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:56692543-56692672 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:57272617-57272488 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 5

Conread position: 18-146
Cow position: chr1:57533934-57533805 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:57538390-57538261 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:58386159-58386030 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:59627097-59626968 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:59730188-59730317 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:61493840-61493711 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:61638950-61638821 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:62529743-62529872 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:62530593-62530464 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:62597183-62597312 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:62928887-62928758 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:63583073-63583202 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:64778464-64778335 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:64818110-64818239 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:65021582-65021453 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:66368354-66368483 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:66909608-66909479 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:67001712-67001583 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:67717292-67717421 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:68052446-68052575 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:68087646-68087517 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:68144930-68145059 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:68280188-68280059 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:68481396-68481267 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:69019639-69019768 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:69513389-69513518 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:69866423-69866552 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:69872463-69872592 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:70533124-70532995 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:70543521-70543392 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:70897784-70897655 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:71123598-71123727 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:71795573-71795444 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:72589323-72589452 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:72805977-72806106 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:73564519-73564648 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:74513102-74513231 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:75403936-75403807 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:76207477-76207606 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:76485770-76485895 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 17

Conread position: 18-146
Cow position: chr1:76917109-76916980 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:77223177-77223048 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:77748783-77748654 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:77841325-77841196 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:80011004-80010875 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:80130656-80130527 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:81309402-81309273 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:81670106-81670236 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 18-146
Cow position: chr1:82482080-82482209 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:83946238-83946367 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:84284744-84284615 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:84449665-84449537 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 123, 98

Conread position: 18-146
Cow position: chr1:84556623-84556752 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:84894884-84894754 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 18-146
Cow position: chr1:84904981-84904855 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 6

Conread position: 18-146
Cow position: chr1:85577816-85577946 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 18-146
Cow position: chr1:86371997-86372126 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:86497330-86497201 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:87565290-87565161 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:89078073-89077944 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:89432445-89432316 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:89435287-89435416 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 18-146
Cow position: chr1:90132656-90132785 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:91674271-91674142 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:94962303-94962432 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:95213603-95213732 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:95344411-95344540 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:95457392-95457263 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:95592685-95592814 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:96671347-96671218 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 18-146
Cow position: chr1:97171362-97171233 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:97512696-97512567 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 18-146
Cow position: chr1:98353354-98353483 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-146
Cow position: chr1:102815513-102815384 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-147
Cow position: chr1:8884603-8884473 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 18-149
Cow position: chr1:15178960-15178832 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 78

Conread position: 18-149
Cow position: chr1:37110037-37110168 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 37

Conread position: 18-149
Cow position: chr1:60343016-60342883 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 18-149
Cow position: chr1:72624894-72624762 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 18-151
Cow position: chr1:62711147-62711283 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 18-151
Cow position: chr1:77925522-77925388 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 18-151
Cow position: chr1:93858750-93858616 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 18-153
Cow position: chr1:95712486-95712622 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 18-166
Cow position: chr1:19235458-19235605 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 32

Conread position: 18-167
Cow position: chr1:10071067-10071219 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 18-169
Cow position: chr1:52598320-52598473 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 19-136
Cow position: chr1:87239904-87240021 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-137
Cow position: chr1:56720461-56720579 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-137
Cow position: chr1:89792516-89792634 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-137
Cow position: chr1:90604805-90604923 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:16839357-16839238 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:25177965-25178084 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:26586261-26586142 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:29520083-29520204 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 19-138
Cow position: chr1:37694704-37694823 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:57571872-57571753 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:72462917-72462798 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-138
Cow position: chr1:76019899-76020020 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 19-138
Cow position: chr1:79333947-79334066 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:292346-292466 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:12057215-12057335 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:13250508-13250628 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:18196635-18196515 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:29429642-29429522 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:30082525-30082405 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:33547360-33547480 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-139
Cow position: chr1:54933972-54933853 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 19-145
Cow position: chr1:35071361-35071234 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:9262535-9262407 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:10790883-10790753 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 9

Conread position: 19-146
Cow position: chr1:21420619-21420746 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 5

Conread position: 19-146
Cow position: chr1:35147501-35147629 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 19-146
Cow position: chr1:38688254-38688126 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:47791035-47791164 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 19-146
Cow position: chr1:56667140-56667012 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 19-146
Cow position: chr1:57615531-57615403 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:57760137-57760009 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:60114809-60114681 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 19-146
Cow position: chr1:62507205-62507333 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 19-146
Cow position: chr1:66752220-66752348 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:68821085-68821213 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 19-146
Cow position: chr1:78234647-78234775 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 19-146
Cow position: chr1:83136974-83136846 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:86597596-86597467 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 19-146
Cow position: chr1:89492201-89492329 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 19-146
Cow position: chr1:97206394-97206266 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 56

Conread position: 19-149
Cow position: chr1:33825611-33825483 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 120, 51

Conread position: 19-151
Cow position: chr1:3264158-3264026 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 9

Conread position: 19-151
Cow position: chr1:4218324-4218459 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 19-151
Cow position: chr1:5506544-5506411 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:8601938-8602071 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:26514572-26514705 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:52372193-52372060 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:56190379-56190512 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:65390601-65390468 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:66491616-66491483 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:70053507-70053374 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:73995468-73995336 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 62

Conread position: 19-151
Cow position: chr1:76748355-76748488 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:85776422-85776555 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:86696625-86696758 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:90095715-90095845 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 51

Conread position: 19-151
Cow position: chr1:91733660-91733527 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 19-151
Cow position: chr1:91869640-91869773 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 19-151
Cow position: chr1:98977717-98977582 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 19-162
Cow position: chr1:22229877-22229732 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 19-162
Cow position: chr1:50670854-50670710 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 5

Conread position: 19-162
Cow position: chr1:55780916-55780771 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 19-162
Cow position: chr1:91888208-91888353 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 19-167
Cow position: chr1:40122281-40122129 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 19-167
Cow position: chr1:86706219-86706068 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 20-137
Cow position: chr1:23920303-23920186 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-146
Cow position: chr1:39234467-39234594 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 20-146
Cow position: chr1:39890392-39890266 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 119, 19

Conread position: 21-138
Cow position: chr1:14240029-14240146 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-138
Cow position: chr1:40604062-40603946 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 21-151
Cow position: chr1:71822143-71822274 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 22-162
Cow position: chr1:82162154-82162296 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 23-138
Cow position: chr1:100707918-100708033 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 23-139
Cow position: chr1:40357776-40357660 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 23-139
Cow position: chr1:98228348-98228465 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 23-146
Cow position: chr1:58066930-58067055 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 23-146
Cow position: chr1:88298242-88298120 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 47

Conread position: 23-151
Cow position: chr1:63601753-63601882 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 23-151
Cow position: chr1:97075461-97075590 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 23-167
Cow position: chr1:69407141-69406995 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 24-132
Cow position: chr1:95687327-95687435 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 24-134
Cow position: chr1:40963106-40963216 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-136
Cow position: chr1:55443583-55443695 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-137
Cow position: chr1:19056903-19056790 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-137
Cow position: chr1:84170276-84170163 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 24-138
Cow position: chr1:50656741-50656855 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-139
Cow position: chr1:61341384-61341499 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 24-139
Cow position: chr1:90392724-90392839 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 24-139
Cow position: chr1:91799211-91799326 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 24-146
Cow position: chr1:1382838-1382961 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 24-146
Cow position: chr1:20528195-20528072 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 24-146
Cow position: chr1:21572817-21572695 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 24-146
Cow position: chr1:43144248-43144125 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 24-146
Cow position: chr1:77883425-77883302 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 24-146
Cow position: chr1:83059607-83059730 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 24-146
Cow position: chr1:87457138-87457015 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 24-146
Cow position: chr1:99912233-99912356 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 24-151
Cow position: chr1:26702424-26702551 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 42

Conread position: 24-151
Cow position: chr1:56140360-56140487 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 25

Conread position: 24-151
Cow position: chr1:67831099-67831227 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 24-151
Cow position: chr1:82502633-82502506 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 92

Conread position: 24-151
Cow position: chr1:90913858-90913730 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 25-137
Cow position: chr1:24412986-24412878 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 25-146
Cow position: chr1:64668772-64668896 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 25-151
Cow position: chr1:3381881-3382008 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 25-162
Cow position: chr1:24015556-24015694 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 27-167
Cow position: chr1:100436676-100436534 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 74

Conread position: 29-139
Cow position: chr1:3398902-3399012 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 29-146
Cow position: chr1:8643282-8643164 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 30-146
Cow position: chr1:39687294-39687177 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 33-139
Cow position: chr1:28277415-28277309 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 34-146
Cow position: chr1:9595037-9595150 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 34-146
Cow position: chr1:68827214-68827327 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 35-167
Cow position: chr1:25185796-25185931 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 39-139
Cow position: chr1:57889066-57888969 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 39-139
Cow position: chr1:70426532-70426432 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 39-139
Cow position: chr1:86114519-86114419 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 39-146
Cow position: chr1:7712793-7712685 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 39-146
Cow position: chr1:23886274-23886382 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 39-146
Cow position: chr1:52979685-52979577 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 39-146
Cow position: chr1:64613726-64613618 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 39-146
Cow position: chr1:68798663-68798771 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 39-146
Cow position: chr1:79554576-79554468 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 39-149
Cow position: chr1:15385899-15386010 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 39-149
Cow position: chr1:86578749-86578639 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 46

Conread position: 39-151
Cow position: chr1:9593396-9593509 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 39-151
Cow position: chr1:68601613-68601723 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 24

Conread position: 39-190
Cow position: chr1:13978507-13978661 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 40-137
Cow position: chr1:35785796-35785699 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 40-137
Cow position: chr1:71714735-71714638 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 40-146
Cow position: chr1:2752416-2752309 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 40-149
Cow position: chr1:81482678-81482568 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 40-153
Cow position: chr1:47234003-47234115 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 85

Conread position: 41-178
Cow position: chr1:27379001-27378861 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 50-139
Cow position: chr1:6961552-6961463 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 53-149
Cow position: chr1:74085811-74085908 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 143-463
Cow position: chr1:73763516-73763839 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 67

Conread position: 146-469
Cow position: chr1:70312263-70311932 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 69, 74

Conread position: 154-499
Cow position: chr1:47249799-47249436 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 218

Conread position: 160-587
Cow position: chr1:20393377-20392950 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 273
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 29

Conread position: 171-561
Cow position: chr1:85713209-85712821 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 19

Conread position: 201-497
Cow position: chr1:61332033-61332337 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 151

Conread position: 203-433
Cow position: chr1:83977484-83977255 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 19

Show alignments to all cow chromosomes.