• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-unkn-AR074G10iTHYCG10R.5
        

               
Conread position:
               
67-342
               

               
Cow position:
               
chr17:24979093-24978817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
69-342
               

               
Cow position:
               
chr17:25076849-25077117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
73-341
               

               
Cow position:
               
chr17:5809630-5809897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr17:20547166-20546897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
75-265
               

               
Cow position:
               
chr17:20157584-20157401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
75-289
               

               
Cow position:
               
chr17:39564-39345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
75-289
               

               
Cow position:
               
chr17:37579005-37579218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-318
               

               
Cow position:
               
chr17:2258255-2258012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-321
               

               
Cow position:
               
chr17:25796364-25796611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 194
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr17:9567817-9568061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-327
               

               
Cow position:
               
chr17:21620690-21620437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr17:17129122-17128856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr17:18776819-18777081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr17:40642114-40642381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr17:42844030-42843761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 196
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:20032940-20033205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:20800788-20800524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:24503824-24503557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:25608530-25608798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:26514691-26514423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:27790768-27791036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr17:32366264-32365994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr17:32138439-32138702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
75-357
               

               
Cow position:
               
chr17:5255400-5255678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
75-357
               

               
Cow position:
               
chr17:25844717-25844433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-357
               

               
Cow position:
               
chr17:29715214-29715492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
75-357
               

               
Cow position:
               
chr17:31231959-31232246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-357
               

               
Cow position:
               
chr17:37694085-37693807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
75-397
               

               
Cow position:
               
chr17:5694975-5695286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
76-249
               

               
Cow position:
               
chr17:5514730-5514559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
76-342
               

               
Cow position:
               
chr17:18312480-18312215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
76-347
               

               
Cow position:
               
chr17:31798786-31798506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
76-359
               

               
Cow position:
               
chr17:6936692-6936971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
78-340
               

               
Cow position:
               
chr17:15854761-15854500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
78-341
               

               
Cow position:
               
chr17:15040433-15040696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-341
               

               
Cow position:
               
chr17:28130075-28130331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:2584667-2584409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:6072551-6072286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:6263880-6263616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:8223724-8223462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:18099071-18099330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:19266438-19266698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:21039244-21038987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:24025954-24026226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:28023869-28024133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:29277199-29276940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:29951514-29951251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:32399550-32399814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr17:34390592-34390853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr17:5281329-5281607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr17:15329301-15329023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-359
               

               
Cow position:
               
chr17:16854086-16854365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
78-369
               

               
Cow position:
               
chr17:43008690-43008400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
79-327
               

               
Cow position:
               
chr17:25909056-25908816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-333
               

               
Cow position:
               
chr17:5330545-5330290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
79-338
               

               
Cow position:
               
chr17:9175722-9175971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
79-338
               

               
Cow position:
               
chr17:31122627-31122886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
79-340
               

               
Cow position:
               
chr17:20361832-20361573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
79-341
               

               
Cow position:
               
chr17:10473798-10473544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr17:256046-255784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr17:13940352-13940611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr17:20304064-20303804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr17:26771390-26771646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr17:29472438-29472190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr17:6858421-6858698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr17:36504061-36504333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr17:39790664-39790380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
80-244
               

               
Cow position:
               
chr17:37482107-37482274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
80-256
               

               
Cow position:
               
chr17:1035632-1035811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
80-258
               

               
Cow position:
               
chr17:32278940-32279116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
80-276
               

               
Cow position:
               
chr17:1020596-1020793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
80-341
               

               
Cow position:
               
chr17:11397635-11397379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
80-341
               

               
Cow position:
               
chr17:34595906-34595653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
80-342
               

               
Cow position:
               
chr17:22775340-22775100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
80-357
               

               
Cow position:
               
chr17:41400006-41400275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
81-255
               

               
Cow position:
               
chr17:33052824-33052657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
81-316
               

               
Cow position:
               
chr17:3503545-3503312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
81-323
               

               
Cow position:
               
chr17:11278066-11278295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
81-341
               

               
Cow position:
               
chr17:9817921-9818181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 187
               

               
Conread position:
               
81-341
               

               
Cow position:
               
chr17:44924222-44924466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
81-342
               

               
Cow position:
               
chr17:21973169-21973423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
81-342
               

               
Cow position:
               
chr17:24824214-24823973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
81-342
               

               
Cow position:
               
chr17:29084154-29083914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
202, 15
               

               
Conread position:
               
82-393
               

               
Cow position:
               
chr17:20269565-20269272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 16
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr17:20815338-20815149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
162, 88
               

               
Conread position:
               
84-276
               

               
Cow position:
               
chr17:13989208-13989400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
85-203
               

               
Cow position:
               
chr17:4968075-4967956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
85-260
               

               
Cow position:
               
chr17:31231150-31231325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 114
               

               
Conread position:
               
85-265
               

               
Cow position:
               
chr17:3182622-3182800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
85-273
               

               
Cow position:
               
chr17:22806575-22806757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
85-276
               

               
Cow position:
               
chr17:12219977-12220166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 13
               

               
Conread position:
               
85-276
               

               
Cow position:
               
chr17:30999733-30999548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
85-289
               

               
Cow position:
               
chr17:1526392-1526592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
85-341
               

               
Cow position:
               
chr17:38614921-38614669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:3095790-3095538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:3683696-3683949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:5553503-5553756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:14231591-14231844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:20848485-20848244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:24553969-24553712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
85-342
               

               
Cow position:
               
chr17:30539290-30539541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
85-352
               

               
Cow position:
               
chr17:1783642-1783908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
85-356
               

               
Cow position:
               
chr17:25901159-25900891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
87-214
               

               
Cow position:
               
chr17:10510699-10510827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
87-224
               

               
Cow position:
               
chr17:12591126-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
87-229
               

               
Cow position:
               
chr17:34207859-34208000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
87-233
               

               
Cow position:
               
chr17:908702-908562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
87-241
               

               
Cow position:
               
chr17:24821825-24821677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
87-243
               

               
Cow position:
               
chr17:21697696-21697538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
87-244
               

               
Cow position:
               
chr17:4436273-4436426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
87-244
               

               
Cow position:
               
chr17:21207173-21207330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
87-246
               

               
Cow position:
               
chr17:9911724-9911566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
87-250
               

               
Cow position:
               
chr17:5006528-5006692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
87-255
               

               
Cow position:
               
chr17:6624218-6624052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
87-258
               

               
Cow position:
               
chr17:38647019-38646859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr17:966779-966949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
87-261
               

               
Cow position:
               
chr17:21710465-21710293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
87-261
               

               
Cow position:
               
chr17:40741608-40741435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
87-262
               

               
Cow position:
               
chr17:4225534-4225704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
87-263
               

               
Cow position:
               
chr17:1328011-1328184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
87-264
               

               
Cow position:
               
chr17:22781651-22781477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
87-264
               

               
Cow position:
               
chr17:24580337-24580514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr17:20835556-20835377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr17:21738916-21739100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr17:25128389-25128565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr17:29040506-29040682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr17:41290061-41290233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr17:25097422-25097245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
87-272
               

               
Cow position:
               
chr17:32419154-32419340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 182
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr17:9778207-9778025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr17:14088363-14088553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 182
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr17:24587581-24587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 181
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr17:32554065-32554249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr17:34948598-34948414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr17:38116373-38116186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:5423111-5423298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:6423720-6423534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:7132491-7132682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 182
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:8279749-8279935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:15333753-15333937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:16307338-16307152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:27274522-27274335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr17:35126667-35126487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr17:21017756-21017566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr17:23246171-23245983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr17:36533616-36533433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
87-286
               

               
Cow position:
               
chr17:31481076-31481278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr17:26627679-26627881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr17:17059391-17059201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr17:17060721-17060924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr17:21003869-21004070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr17:11664630-11664829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
87-296
               

               
Cow position:
               
chr17:16371213-16371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
87-297
               

               
Cow position:
               
chr17:28539989-28539788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
87-298
               

               
Cow position:
               
chr17:21031742-21031540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
87-311
               

               
Cow position:
               
chr17:21114991-21115206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
87-313
               

               
Cow position:
               
chr17:4612115-4612339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
87-315
               

               
Cow position:
               
chr17:26818490-26818717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
87-315
               

               
Cow position:
               
chr17:42347266-42347486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr17:8079276-8079051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr17:14051138-14051369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 182
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr17:7760506-7760742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr17:10790276-10790041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 182
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr17:20126572-20126349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr17:40312686-40312453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr17:37163561-37163805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr17:8544267-8544031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr17:11376826-11376584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 183
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr17:12054681-12054443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr17:18473138-18472910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
87-332
               

               
Cow position:
               
chr17:25590275-25590508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
87-334
               

               
Cow position:
               
chr17:18109126-18109370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
87-334
               

               
Cow position:
               
chr17:22032731-22032967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr17:18720490-18720730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
87-338
               

               
Cow position:
               
chr17:5000619-5000865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 80
               

               
Conread position:
               
87-338
               

               
Cow position:
               
chr17:5688398-5688635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
87-338
               

               
Cow position:
               
chr17:24077363-24077118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
87-339
               

               
Cow position:
               
chr17:11618545-11618291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr17:3471380-3471125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr17:20090665-20090908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr17:25189247-25188993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr17:25755747-25755494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr17:43141756-43142010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:4606918-4606681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:9914572-9914317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 182
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:12216114-12216362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 208
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:15225599-15225852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:16117463-16117719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 184
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:17121634-17121385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:20083554-20083803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:20993080-20993331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:21312851-21313106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:24550136-24549879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:25815560-25815317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:29292407-29292659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:30718459-30718707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:33933789-33934037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr17:40771796-40771537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:242597-242347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:1061100-1061350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 112
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:1295610-1295863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:1482312-1482060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
86, 181
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:3306826-3306577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:3387247-3387005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:3498704-3498956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:4601585-4601835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:5224360-5224111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:5767874-5767608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:6566427-6566187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:7559709-7559970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:8690482-8690744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:11215932-11216172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:11381756-11382007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:11386477-11386224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:12059135-12059385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
192, 65
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:13143731-13143974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:13922438-13922186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 183
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:17266383-17266639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:20093174-20093416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:21293081-21293337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:21335735-21335989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 181
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:21495336-21495085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:21874347-21874608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:22564141-22563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:23337057-23337306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:23879864-23880119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:24883608-24883855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
191, 37
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:25168278-25168021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:26764976-26764725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:27306118-27305871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:27667229-27667486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:27795605-27795356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:30665231-30664987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:32651579-32651324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:34079142-34079390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:35438058-35437802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 182
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:38833002-38832750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:40331726-40331477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:40421629-40421377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:43527937-43527691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr17:43717355-43717600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
180, 72
               

               
Conread position:
               
87-347
               

               
Cow position:
               
chr17:20780470-20780221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
87-349
               

               
Cow position:
               
chr17:20234188-20233928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
87-352
               

               
Cow position:
               
chr17:11056411-11056680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 264
               

               
Conread position:
               
87-352
               

               
Cow position:
               
chr17:12477884-12477615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 128
               

               
Conread position:
               
87-352
               

               
Cow position:
               
chr17:20022557-20022818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr17:11035886-11035619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
87-356
               

               
Cow position:
               
chr17:18860763-18861023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:6156000-6155735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:9117606-9117342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 181
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:10528775-10529047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 182
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:10649805-10649543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:14003777-14003523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:14033681-14033953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 184
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:15299915-15300170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:27679277-27679550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 185
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:30529580-30529842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:32027496-32027768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 185
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr17:33271723-33271979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
87-358
               

               
Cow position:
               
chr17:17410250-17409990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
87-359
               

               
Cow position:
               
chr17:13244081-13244328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
87-361
               

               
Cow position:
               
chr17:8926256-8926538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
87-362
               

               
Cow position:
               
chr17:26183182-26182910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
87-363
               

               
Cow position:
               
chr17:17222304-17222032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
87-385
               

               
Cow position:
               
chr17:14025953-14026248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
87-402
               

               
Cow position:
               
chr17:23101249-23101555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
88-261
               

               
Cow position:
               
chr17:1275483-1275307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr17:21323251-21323085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
88-265
               

               
Cow position:
               
chr17:11156531-11156709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
88-277
               

               
Cow position:
               
chr17:9697740-9697928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
88-278
               

               
Cow position:
               
chr17:27162613-27162424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr17:27142718-27142515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr17:21243825-21244043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 153
               

               
Conread position:
               
88-340
               

               
Cow position:
               
chr17:5246856-5246595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr17:14265595-14265846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 182
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr17:16869318-16869569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr17:25541856-25542104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr17:32989440-32989201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr17:32993660-32993905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr17:41029913-41029660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
88-393
               

               
Cow position:
               
chr17:20358834-20358539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
89-289
               

               
Cow position:
               
chr17:11101843-11102033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
89-342
               

               
Cow position:
               
chr17:10511928-10512181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
89-342
               

               
Cow position:
               
chr17:34316749-34317009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
90-261
               

               
Cow position:
               
chr17:11281151-11281319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
90-276
               

               
Cow position:
               
chr17:24787063-24787247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
90-326
               

               
Cow position:
               
chr17:20081831-20082055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
90-336
               

               
Cow position:
               
chr17:16448293-16448048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 140
               

               
Conread position:
               
90-336
               

               
Cow position:
               
chr17:17452647-17452901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 105
               

               
Conread position:
               
90-342
               

               
Cow position:
               
chr17:3782001-3781744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
91-235
               

               
Cow position:
               
chr17:3442714-3442854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
91-265
               

               
Cow position:
               
chr17:30713303-30713137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
91-322
               

               
Cow position:
               
chr17:17951202-17950971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
91-342
               

               
Cow position:
               
chr17:1410285-1410538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
91-342
               

               
Cow position:
               
chr17:24973906-24973658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
91-357
               

               
Cow position:
               
chr17:39736134-39735880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
91-368
               

               
Cow position:
               
chr17:17406094-17405804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
91-396
               

               
Cow position:
               
chr17:27979126-27978814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr17:11296594-11296364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
92-328
               

               
Cow position:
               
chr17:16446476-16446707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
92-355
               

               
Cow position:
               
chr17:30815918-30816181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
93-341
               

               
Cow position:
               
chr17:40289042-40289291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
94-342
               

               
Cow position:
               
chr17:35287379-35287635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 182
               

               
Conread position:
               
95-342
               

               
Cow position:
               
chr17:15664622-15664377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
95-361
               

               
Cow position:
               
chr17:21870785-21871045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
96-340
               

               
Cow position:
               
chr17:29157367-29157140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr17:5805485-5805731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 173
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr17:16699477-16699717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr17:21659765-21660006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
96-342
               

               
Cow position:
               
chr17:36331014-36331254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
96-357
               

               
Cow position:
               
chr17:25875363-25875103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
96-361
               

               
Cow position:
               
chr17:15102934-15103190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 170
               

               
Conread position:
               
97-265
               

               
Cow position:
               
chr17:12325798-12325962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
97-325
               

               
Cow position:
               
chr17:21494262-21494492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-327
               

               
Cow position:
               
chr17:3709819-3709588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-340
               

               
Cow position:
               
chr17:8644989-8644747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:1971159-1970913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:3744168-3743923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:5174165-5174410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:10008610-10008855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:10319085-10318840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:11677232-11677477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:12857256-12857011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:13871504-13871259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:13999051-13999296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:15319296-15319051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:15910506-15910261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:17032666-17032911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:19317918-19317673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:19370453-19370698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:19377146-19377391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:20231777-20232022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:21212083-21212328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:21716191-21716436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:24094759-24095004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:27864112-27863867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:30224805-30225050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:34565351-34565106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:36285266-36285021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:36413030-36413275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:38837518-38837278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
97-341
               

               
Cow position:
               
chr17:39823189-39823434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-342
               

               
Cow position:
               
chr17:5895960-5896204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
97-342
               

               
Cow position:
               
chr17:18592393-18592146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 170
               

               
Conread position:
               
97-342
               

               
Cow position:
               
chr17:19999089-19998843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-356
               

               
Cow position:
               
chr17:18337729-18337988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-357
               

               
Cow position:
               
chr17:16398843-16399103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
97-357
               

               
Cow position:
               
chr17:23063664-23063408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
97-357
               

               
Cow position:
               
chr17:33288706-33288960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
97-357
               

               
Cow position:
               
chr17:35184989-35184728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
97-361
               

               
Cow position:
               
chr17:14008436-14008167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
97-365
               

               
Cow position:
               
chr17:6065672-6065403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
98-262
               

               
Cow position:
               
chr17:35371874-35372029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
98-289
               

               
Cow position:
               
chr17:24877091-24876899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 171
               

               
Conread position:
               
98-342
               

               
Cow position:
               
chr17:730501-730741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
98-342
               

               
Cow position:
               
chr17:40368877-40368632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 171
               

               
Conread position:
               
98-342
               

               
Cow position:
               
chr17:43826297-43826526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr17:9662751-9662993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
100-264
               

               
Cow position:
               
chr17:7810788-7810954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
100-265
               

               
Cow position:
               
chr17:12759689-12759856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
100-316
               

               
Cow position:
               
chr17:16291899-16292117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 170
               

               
Conread position:
               
100-339
               

               
Cow position:
               
chr17:43324267-43324507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-340
               

               
Cow position:
               
chr17:4479874-4480115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
100-340
               

               
Cow position:
               
chr17:9897854-9897627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr17:21926655-21926419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr17:27985885-27986127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr17:43725562-43725803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
73, 168
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:31444-31201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:923825-923588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:1710333-1710102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:2266190-2265947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:4152272-4152515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:4176669-4176915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:8214239-8213996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:12356965-12357205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:12929591-12929835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 173
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:20987649-20987892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:24786336-24786093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:25946853-25947096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:34235248-34235491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:42398382-42398143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr17:5898577-5898832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr17:14212018-14212276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 168
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr17:17494292-17494035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr17:43992484-43992229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
101-247
               

               
Cow position:
               
chr17:1256552-1256702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
101-250
               

               
Cow position:
               
chr17:26224467-26224317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
101-275
               

               
Cow position:
               
chr17:3258441-3258272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
101-282
               

               
Cow position:
               
chr17:27048105-27047931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
101-340
               

               
Cow position:
               
chr17:4339110-4339346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
101-341
               

               
Cow position:
               
chr17:14239485-14239726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 168
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr17:5280697-5280934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr17:17179975-17179748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr17:20889326-20889083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr17:35388067-35388306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
101-357
               

               
Cow position:
               
chr17:13409403-13409658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
102-341
               

               
Cow position:
               
chr17:13966504-13966744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
102-341
               

               
Cow position:
               
chr17:16504749-16504986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
102-341
               

               
Cow position:
               
chr17:18410576-18410816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
102-342
               

               
Cow position:
               
chr17:35234050-35233813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
102-352
               

               
Cow position:
               
chr17:8993341-8993591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
103-332
               

               
Cow position:
               
chr17:30059935-30059706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr17:399617-399855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr17:5548553-5548791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr17:16874582-16874344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr17:20391772-20391534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr17:25195690-25195452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr17:39844628-39844390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
104-265
               

               
Cow position:
               
chr17:18884402-18884563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
104-291
               

               
Cow position:
               
chr17:20839618-20839798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr17:7040999-7041210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
104-338
               

               
Cow position:
               
chr17:9565252-9565022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
104-340
               

               
Cow position:
               
chr17:11839643-11839411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
104-341
               

               
Cow position:
               
chr17:15985292-15985068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
104-341
               

               
Cow position:
               
chr17:30204598-30204367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
104-342
               

               
Cow position:
               
chr17:11768119-11767882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
105-277
               

               
Cow position:
               
chr17:7697999-7697829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
105-283
               

               
Cow position:
               
chr17:33999104-33999277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
105-340
               

               
Cow position:
               
chr17:9853931-9853696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
67, 165
               

               
Conread position:
               
105-342
               

               
Cow position:
               
chr17:2006641-2006412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
105-342
               

               
Cow position:
               
chr17:11171737-11171504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
105-342
               

               
Cow position:
               
chr17:32457638-32457872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
106-255
               

               
Cow position:
               
chr17:26757676-26757524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
106-280
               

               
Cow position:
               
chr17:21755498-21755669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
106-342
               

               
Cow position:
               
chr17:20652957-20653193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
107-274
               

               
Cow position:
               
chr17:11172677-11172840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
108-256
               

               
Cow position:
               
chr17:27429520-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr17:2662352-2662185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 161
               

               
Conread position:
               
108-335
               

               
Cow position:
               
chr17:26532806-26532583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr17:25740890-25740660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
108-341
               

               
Cow position:
               
chr17:7251988-7251754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 164
               

               
Conread position:
               
109-276
               

               
Cow position:
               
chr17:3578179-3578017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 54
               

               
Conread position:
               
109-299
               

               
Cow position:
               
chr17:1026217-1026030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
109-334
               

               
Cow position:
               
chr17:18494579-18494797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
109-335
               

               
Cow position:
               
chr17:10634120-10634343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
200, 54
               

               
Conread position:
               
109-341
               

               
Cow position:
               
chr17:27697765-27697983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr17:4213699-4213465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr17:6082471-6082254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr17:13236787-13237013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr17:26084971-26084741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr17:41995734-41995486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
110-342
               

               
Cow position:
               
chr17:5747857-5748092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 161
               

               
Conread position:
               
111-255
               

               
Cow position:
               
chr17:13124796-13124942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
111-342
               

               
Cow position:
               
chr17:40406243-40406015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr17:18563821-18564050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr17:25181211-25181437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr17:34017032-34017260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr17:34628548-34628777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 55
               

               
Conread position:
               
115-263
               

               
Cow position:
               
chr17:32471859-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 117
               

               
Conread position:
               
115-335
               

               
Cow position:
               
chr17:3843417-3843207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
115-341
               

               
Cow position:
               
chr17:12657707-12657933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
115-357
               

               
Cow position:
               
chr17:6123770-6123528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
116-362
               

               
Cow position:
               
chr17:36197556-36197309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
119-244
               

               
Cow position:
               
chr17:44108567-44108690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
120-359
               

               
Cow position:
               
chr17:9753715-9753491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
121-342
               

               
Cow position:
               
chr17:12289490-12289711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
121-342
               

               
Cow position:
               
chr17:26230868-26230647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
122-245
               

               
Cow position:
               
chr17:35311350-35311225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
122-265
               

               
Cow position:
               
chr17:21419358-21419216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
122-276
               

               
Cow position:
               
chr17:2079685-2079535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
122-277
               

               
Cow position:
               
chr17:7423517-7423668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
122-278
               

               
Cow position:
               
chr17:39012646-39012490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
122-285
               

               
Cow position:
               
chr17:14848603-14848757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
122-323
               

               
Cow position:
               
chr17:22081976-22082165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
122-327
               

               
Cow position:
               
chr17:5041753-5041955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
122-335
               

               
Cow position:
               
chr17:19891544-19891332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
122-336
               

               
Cow position:
               
chr17:25707883-25707659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
122-338
               

               
Cow position:
               
chr17:21680696-21680480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
122-340
               

               
Cow position:
               
chr17:39208744-39208959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
122-341
               

               
Cow position:
               
chr17:16895373-16895585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
122-341
               

               
Cow position:
               
chr17:42026464-42026245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
122-342
               

               
Cow position:
               
chr17:1493231-1493448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
122-342
               

               
Cow position:
               
chr17:3153844-3154061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
122-342
               

               
Cow position:
               
chr17:15893829-15893612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
122-342
               

               
Cow position:
               
chr17:21363331-21363120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
122-342
               

               
Cow position:
               
chr17:31310297-31310521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
122-360
               

               
Cow position:
               
chr17:18764136-18764379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
123-276
               

               
Cow position:
               
chr17:23680905-23680756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
123-289
               

               
Cow position:
               
chr17:4836540-4836374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
123-313
               

               
Cow position:
               
chr17:9950880-9950696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
123-335
               

               
Cow position:
               
chr17:4752812-4752603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
123-342
               

               
Cow position:
               
chr17:1568250-1568461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
123-342
               

               
Cow position:
               
chr17:29074412-29074633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr17:11471831-11471598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
124-283
               

               
Cow position:
               
chr17:15376244-15376090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
124-340
               

               
Cow position:
               
chr17:23517246-23517457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
124-340
               

               
Cow position:
               
chr17:36746403-36746602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
124-341
               

               
Cow position:
               
chr17:18036063-18036278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
124-341
               

               
Cow position:
               
chr17:35457574-35457357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
124-342
               

               
Cow position:
               
chr17:22057251-22057465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr17:11304958-11304724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
127-289
               

               
Cow position:
               
chr17:17267006-17267171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
127-313
               

               
Cow position:
               
chr17:3511466-3511652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr17:4085626-4085419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
127-340
               

               
Cow position:
               
chr17:33370291-33370501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:76792-77006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:5541648-5541862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:6145733-6145519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:6612996-6612782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:6801096-6801310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:7585393-7585179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:10025477-10025691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:10254870-10254656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:10354139-10354353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:11786897-11786683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:15439763-15439549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:17260201-17259987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:17958566-17958356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
161, 45
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:21439806-21439592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:22087589-22087375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:22248279-22248493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:28155385-28155599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:29364726-29364513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:31532284-31532070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:31986227-31986441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:37527774-37527988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-341
               

               
Cow position:
               
chr17:43539977-43539763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:148880-148665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:3156830-3156615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:6180928-6180714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 124
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:7396318-7396535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 170
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:9748683-9748478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:14021500-14021711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:21182471-21182256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr17:33058635-33058850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
127-347
               

               
Cow position:
               
chr17:27069401-27069187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
127-357
               

               
Cow position:
               
chr17:26823018-26822789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr17:587926-588157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr17:22226334-22226569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
127-396
               

               
Cow position:
               
chr17:15293612-15293880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
128-341
               

               
Cow position:
               
chr17:15352994-15352783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
129-362
               

               
Cow position:
               
chr17:17982860-17983085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr17:8832188-8832378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr17:2729884-2730090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
134-265
               

               
Cow position:
               
chr17:15155272-15155404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr17:5053390-5053218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
134-336
               

               
Cow position:
               
chr17:18490447-18490250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
134-341
               

               
Cow position:
               
chr17:26828779-26828986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
134-342
               

               
Cow position:
               
chr17:16463199-16463406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
134-342
               

               
Cow position:
               
chr17:26477064-26476859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
134-352
               

               
Cow position:
               
chr17:20874230-20874024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
134-393
               

               
Cow position:
               
chr17:18266986-18266722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
134-401
               

               
Cow position:
               
chr17:11912788-11913047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
134-553
               

               
Cow position:
               
chr17:21771520-21771101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
135-341
               

               
Cow position:
               
chr17:14931976-14932179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
135-342
               

               
Cow position:
               
chr17:20855593-20855388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
136-316
               

               
Cow position:
               
chr17:42560024-42559850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
137-342
               

               
Cow position:
               
chr17:4155518-4155314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr17:34847170-34847394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
137-366
               

               
Cow position:
               
chr17:23723798-23723565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 210
               

               
Conread position:
               
140-299
               

               
Cow position:
               
chr17:144267-144422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
140-342
               

               
Cow position:
               
chr17:40701581-40701379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
140-357
               

               
Cow position:
               
chr17:25344029-25344246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr17:2152097-2151883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
141-342
               

               
Cow position:
               
chr17:20858131-20858329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
141-342
               

               
Cow position:
               
chr17:25145399-25145602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
146-342
               

               
Cow position:
               
chr17:31077284-31077089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
147-265
               

               
Cow position:
               
chr17:4685473-4685350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr17:185100-184906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr17:5637938-5638132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr17:6956593-6956399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr17:9936257-9936449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr17:15118770-15118576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
153-263
               

               
Cow position:
               
chr17:32977078-32977188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
153-352
               

               
Cow position:
               
chr17:2275168-2274973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr17:3196689-3196892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr17:22790993-22790792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
153-359
               

               
Cow position:
               
chr17:27580561-27580363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
158-357
               

               
Cow position:
               
chr17:40802702-40802506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
162-321
               

               
Cow position:
               
chr17:6997976-6997819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
167-340
               

               
Cow position:
               
chr17:20129559-20129388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
172-342
               

               
Cow position:
               
chr17:1456357-1456528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 95
               

               
Conread position:
               
172-342
               

               
Cow position:
               
chr17:2270645-2270476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
172-342
               

               
Cow position:
               
chr17:30728147-30727982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
173-341
               

               
Cow position:
               
chr17:13457942-13458109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
173-341
               

               
Cow position:
               
chr17:19484573-19484740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
173-341
               

               
Cow position:
               
chr17:34191056-34191223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
173-342
               

               
Cow position:
               
chr17:3388735-3388570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
173-342
               

               
Cow position:
               
chr17:38829959-38829792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr17:5730800-5730614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
173-362
               

               
Cow position:
               
chr17:2810497-2810305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 146
               

               
Conread position:
               
174-342
               

               
Cow position:
               
chr17:23803342-23803174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
175-342
               

               
Cow position:
               
chr17:4299494-4299333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
179-357
               

               
Cow position:
               
chr17:14050324-14050498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
182-342
               

               
Cow position:
               
chr17:18201641-18201485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
196-344
               

               
Cow position:
               
chr17:42258760-42258612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr17:22773481-22773624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
199-343
               

               
Cow position:
               
chr17:19766117-19765975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
204-342
               

               
Cow position:
               
chr17:39257172-39257306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr17:24946713-24946864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
210-352
               

               
Cow position:
               
chr17:4107182-4107320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
210-352
               

               
Cow position:
               
chr17:4122917-4123056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
219-342
               

               
Cow position:
               
chr17:34208286-34208407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
236-341
               

               
Cow position:
               
chr17:2249640-2249744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
236-341
               

               
Cow position:
               
chr17:16876218-16876114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
236-402
               

               
Cow position:
               
chr17:12539067-12539223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
239-349
               

               
Cow position:
               
chr17:23345881-23345990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               
Show alignments to all cow chromosomes.