Cow genome map

Conread name: Ss1.1-unkn-AR074G10iTHYCG10R.5

Conread position: 53-341
Cow position: chrX:2274902-2274612 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 36

Conread position: 53-357
Cow position: chrX:2499358-2499660 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 36

Conread position: 72-342
Cow position: chrX:45399531-45399804 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 16

Conread position: 73-341
Cow position: chrX:501623-501885 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 12

Conread position: 73-341
Cow position: chrX:33764309-33764039 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 197

Conread position: 73-341
Cow position: chrX:38442924-38442657 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 13

Conread position: 73-341
Cow position: chrX:48328422-48328692 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 197

Conread position: 73-361
Cow position: chrX:30159049-30159335 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 7

Conread position: 74-357
Cow position: chrX:3361781-3361499 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 7

Conread position: 74-361
Cow position: chrX:10865909-10866191 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 6, 14

Conread position: 75-251
Cow position: chrX:8070740-8070916 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 15

Conread position: 75-259
Cow position: chrX:16324007-16324187 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 13

Conread position: 75-276
Cow position: chrX:21672513-21672309 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 13

Conread position: 75-278
Cow position: chrX:20677328-20677123 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 13

Conread position: 75-311
Cow position: chrX:2964011-2963775 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 13

Conread position: 75-325
Cow position: chrX:31556537-31556787 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 5, 20

Conread position: 75-326
Cow position: chrX:754920-754668 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 13

Conread position: 75-339
Cow position: chrX:13913037-13912776 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 85

Conread position: 75-341
Cow position: chrX:7053773-7054040 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 13

Conread position: 75-341
Cow position: chrX:14409425-14409692 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 13

Conread position: 75-341
Cow position: chrX:16711916-16711649 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 13

Conread position: 75-342
Cow position: chrX:10428501-10428234 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 13

Conread position: 75-342
Cow position: chrX:21227431-21227166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 98

Conread position: 75-342
Cow position: chrX:21785725-21785462 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 5, 16

Conread position: 75-342
Cow position: chrX:23571838-23572106 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 13

Conread position: 75-342
Cow position: chrX:25945875-25946140 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 15

Conread position: 75-342
Cow position: chrX:30179964-30180232 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 74

Conread position: 75-342
Cow position: chrX:30228151-30228416 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 6

Conread position: 75-342
Cow position: chrX:31977884-31978150 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 13

Conread position: 75-342
Cow position: chrX:37133572-37133840 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 6

Conread position: 75-342
Cow position: chrX:38071807-38072073 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 13

Conread position: 75-349
Cow position: chrX:14121790-14122064 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 10

Conread position: 75-352
Cow position: chrX:5319754-5320033 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 13

Conread position: 75-352
Cow position: chrX:37072364-37072091 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 97, 12

Conread position: 75-355
Cow position: chrX:42460142-42459854 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 11

Conread position: 75-357
Cow position: chrX:14846112-14846394 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 13

Conread position: 75-357
Cow position: chrX:24768902-24769180 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 13

Conread position: 75-357
Cow position: chrX:27997608-27997330 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 13

Conread position: 75-357
Cow position: chrX:34554683-34554415 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 13

Conread position: 75-357
Cow position: chrX:39559690-39559972 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 173

Conread position: 75-361
Cow position: chrX:30141356-30141649 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 13

Conread position: 76-342
Cow position: chrX:20945519-20945262 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 5

Conread position: 78-327
Cow position: chrX:18194869-18194622 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 9

Conread position: 78-327
Cow position: chrX:23264479-23264728 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 9

Conread position: 78-340
Cow position: chrX:42855368-42855107 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 9

Conread position: 78-341
Cow position: chrX:16703628-16703365 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 9

Conread position: 78-341
Cow position: chrX:32583855-32584118 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 9

Conread position: 78-342
Cow position: chrX:1550908-1550644 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:11949539-11949799 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:12179919-12179662 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:18077952-18078216 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:18897698-18897957 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:18949787-18950051 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:20877805-20878069 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:21833843-21833579 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:23280961-23280700 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 12

Conread position: 78-342
Cow position: chrX:24441289-24441553 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:26531916-26531652 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 12

Conread position: 78-342
Cow position: chrX:28646026-28646291 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 116

Conread position: 78-342
Cow position: chrX:29848675-29848937 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:30454664-30454928 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 9

Conread position: 78-342
Cow position: chrX:32094492-32094756 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 12

Conread position: 78-342
Cow position: chrX:35240820-35240558 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:35268835-35268584 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 78-342
Cow position: chrX:38151647-38151382 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 9

Conread position: 78-342
Cow position: chrX:40544650-40544916 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:41103744-41103482 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 9

Conread position: 78-342
Cow position: chrX:41157269-41157005 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 9

Conread position: 78-342
Cow position: chrX:45787084-45786824 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 9

Conread position: 78-357
Cow position: chrX:2478670-2478947 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 9

Conread position: 78-357
Cow position: chrX:23024659-23024384 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 9

Conread position: 78-357
Cow position: chrX:30823474-30823196 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 9

Conread position: 78-361
Cow position: chrX:4905033-4905313 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 12

Conread position: 79-244
Cow position: chrX:9425788-9425951 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 8

Conread position: 79-320
Cow position: chrX:38102490-38102728 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 8

Conread position: 79-327
Cow position: chrX:2944911-2945159 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 8

Conread position: 79-332
Cow position: chrX:46606556-46606806 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 8

Conread position: 79-340
Cow position: chrX:5046947-5047201 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 22

Conread position: 79-340
Cow position: chrX:20030209-20029943 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 8

Conread position: 79-341
Cow position: chrX:14819671-14819407 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:6493686-6493426 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 8

Conread position: 79-342
Cow position: chrX:11820307-11820052 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 11

Conread position: 79-342
Cow position: chrX:14163148-14162885 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:17964568-17964821 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 93, 26

Conread position: 79-342
Cow position: chrX:18118515-18118778 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 6

Conread position: 79-342
Cow position: chrX:18244942-18244683 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 8

Conread position: 79-342
Cow position: chrX:22821371-22821108 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:23122343-23122078 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:25452499-25452244 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 79-342
Cow position: chrX:25458680-25458943 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:27498725-27498462 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:27761299-27761034 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:32188406-32188665 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 8

Conread position: 79-342
Cow position: chrX:36249909-36250168 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 8

Conread position: 79-357
Cow position: chrX:6655310-6655587 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 8

Conread position: 79-357
Cow position: chrX:21063173-21062897 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 8

Conread position: 79-364
Cow position: chrX:10306627-10306346 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 8

Conread position: 79-366
Cow position: chrX:7755858-7755572 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 8

Conread position: 80-246
Cow position: chrX:3579897-3579735 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 7

Conread position: 80-255
Cow position: chrX:36283303-36283125 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 7

Conread position: 80-265
Cow position: chrX:27772010-27772186 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 80-276
Cow position: chrX:32420171-32419970 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 7

Conread position: 80-289
Cow position: chrX:41674061-41673850 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 15

Conread position: 80-316
Cow position: chrX:40647937-40647698 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 7

Conread position: 80-335
Cow position: chrX:38967599-38967353 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 7

Conread position: 80-340
Cow position: chrX:14599484-14599229 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 93, 7

Conread position: 80-342
Cow position: chrX:23299910-23299648 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 7

Conread position: 80-342
Cow position: chrX:26440827-26441086 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 7

Conread position: 80-342
Cow position: chrX:27516480-27516227 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 7

Conread position: 80-342
Cow position: chrX:28846930-28847182 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 7

Conread position: 80-342
Cow position: chrX:33466561-33466311 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 80-342
Cow position: chrX:33639924-33639662 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 7

Conread position: 80-342
Cow position: chrX:37843674-37843414 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 7

Conread position: 80-343
Cow position: chrX:25035428-25035693 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 35, 7

Conread position: 80-357
Cow position: chrX:16078615-16078349 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 7

Conread position: 81-252
Cow position: chrX:25036744-25036918 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 76

Conread position: 81-277
Cow position: chrX:42011237-42011037 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 45

Conread position: 81-299
Cow position: chrX:17744016-17743800 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 188

Conread position: 81-342
Cow position: chrX:2300881-2300625 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 73

Conread position: 81-342
Cow position: chrX:34376896-34376647 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 91, 6

Conread position: 82-270
Cow position: chrX:37067290-37067099 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 39

Conread position: 82-357
Cow position: chrX:29777996-29777722 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 185

Conread position: 83-276
Cow position: chrX:47248835-47249028 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 39

Conread position: 84-259
Cow position: chrX:17042644-17042466 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 92

Conread position: 84-312
Cow position: chrX:48800488-48800261 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 12

Conread position: 84-342
Cow position: chrX:39699272-39699020 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 34

Conread position: 84-342
Cow position: chrX:47145041-47144769 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 17

Conread position: 85-251
Cow position: chrX:46429910-46430075 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 83

Conread position: 85-262
Cow position: chrX:11856377-11856202 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 85

Conread position: 85-263
Cow position: chrX:12979879-12980057 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 12, 173

Conread position: 85-264
Cow position: chrX:7513462-7513287 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 83

Conread position: 85-265
Cow position: chrX:27514823-27514638 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 85-265
Cow position: chrX:30962925-30963102 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 81

Conread position: 85-265
Cow position: chrX:35542843-35542661 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 108

Conread position: 85-276
Cow position: chrX:619056-619248 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 181

Conread position: 85-276
Cow position: chrX:33493725-33493535 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 29

Conread position: 85-277
Cow position: chrX:6640078-6639881 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 89

Conread position: 85-332
Cow position: chrX:16721856-16722098 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 11, 19

Conread position: 85-341
Cow position: chrX:34285113-34285369 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 18

Conread position: 85-342
Cow position: chrX:1946763-1947027 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 190

Conread position: 85-342
Cow position: chrX:28787303-28787061 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 85-342
Cow position: chrX:34441503-34441753 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 8, 85

Conread position: 85-342
Cow position: chrX:35224244-35223996 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 12, 51

Conread position: 85-342
Cow position: chrX:38006816-38007074 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 85-342
Cow position: chrX:41403927-41403655 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 85-342
Cow position: chrX:41410475-41410203 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 85-342
Cow position: chrX:41878985-41879236 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 79

Conread position: 85-342
Cow position: chrX:42247238-42247482 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 25

Conread position: 85-356
Cow position: chrX:32170939-32171201 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 12

Conread position: 85-357
Cow position: chrX:24318013-24317746 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 124

Conread position: 85-361
Cow position: chrX:19674599-19674323 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 13

Conread position: 85-422
Cow position: chrX:10412038-10412370 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 145

Conread position: 86-334
Cow position: chrX:41238423-41238661 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 13, 35

Conread position: 86-347
Cow position: chrX:42086808-42086551 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 87-206
Cow position: chrX:27145568-27145452 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 87-218
Cow position: chrX:34792363-34792494 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 61

Conread position: 87-225
Cow position: chrX:31311974-31311835 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 87-237
Cow position: chrX:37781166-37781320 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 87-244
Cow position: chrX:6234507-6234658 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 78

Conread position: 87-246
Cow position: chrX:29542274-29542430 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 87-247
Cow position: chrX:27174941-27174782 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 82

Conread position: 87-249
Cow position: chrX:34411787-34411625 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 85, 46

Conread position: 87-251
Cow position: chrX:40567552-40567383 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 87-255
Cow position: chrX:29601885-29602053 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 85, 65

Conread position: 87-255
Cow position: chrX:46072875-46073042 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 157, 66

Conread position: 87-260
Cow position: chrX:29509496-29509669 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 84

Conread position: 87-260
Cow position: chrX:43049294-43049117 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 87-260
Cow position: chrX:46315432-46315604 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 152

Conread position: 87-261
Cow position: chrX:13382275-13382098 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 87-261
Cow position: chrX:22074745-22074574 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 87-263
Cow position: chrX:25411786-25411612 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 49

Conread position: 87-264
Cow position: chrX:11589642-11589821 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 108

Conread position: 87-264
Cow position: chrX:11746792-11746613 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 145

Conread position: 87-264
Cow position: chrX:13265678-13265849 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 87-265
Cow position: chrX:6278555-6278736 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 87-265
Cow position: chrX:22821996-22821817 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 43

Conread position: 87-265
Cow position: chrX:36975897-36975719 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 88

Conread position: 87-265
Cow position: chrX:37910391-37910223 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 60

Conread position: 87-265
Cow position: chrX:40116366-40116195 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 87-265
Cow position: chrX:42338997-42339166 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 87-270
Cow position: chrX:4942809-4942985 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 87-270
Cow position: chrX:38549392-38549214 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 30

Conread position: 87-272
Cow position: chrX:30420984-30421175 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 153

Conread position: 87-274
Cow position: chrX:41167019-41167202 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 82

Conread position: 87-275
Cow position: chrX:11938982-11939163 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 87-275
Cow position: chrX:17662648-17662838 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 87-276
Cow position: chrX:2206605-2206784 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 51

Conread position: 87-276
Cow position: chrX:9855250-9855060 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 179

Conread position: 87-276
Cow position: chrX:9954091-9953901 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 179

Conread position: 87-276
Cow position: chrX:10373264-10373067 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 18

Conread position: 87-276
Cow position: chrX:21004627-21004444 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 65

Conread position: 87-276
Cow position: chrX:23514070-23514258 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 106, 84

Conread position: 87-276
Cow position: chrX:27394075-27394254 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 87-276
Cow position: chrX:34543733-34543547 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 87

Conread position: 87-276
Cow position: chrX:41884469-41884658 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 86, 178

Conread position: 87-276
Cow position: chrX:42499079-42499271 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 88

Conread position: 87-276
Cow position: chrX:44053203-44053018 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 87-277
Cow position: chrX:9416748-9416934 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 87-277
Cow position: chrX:17630861-17631043 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 87-278
Cow position: chrX:678621-678810 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 47

Conread position: 87-278
Cow position: chrX:40035498-40035693 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 25

Conread position: 87-279
Cow position: chrX:35284565-35284374 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 82

Conread position: 87-280
Cow position: chrX:39558405-39558594 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 159, 59

Conread position: 87-283
Cow position: chrX:27431969-27432166 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 182

Conread position: 87-285
Cow position: chrX:19019161-19019358 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 58

Conread position: 87-288
Cow position: chrX:23497723-23497915 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 87-289
Cow position: chrX:7497185-7496992 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 87-297
Cow position: chrX:32020174-32020384 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 84

Conread position: 87-299
Cow position: chrX:17725919-17725715 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 87-300
Cow position: chrX:40789154-40788941 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 31

Conread position: 87-301
Cow position: chrX:39938578-39938779 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 21

Conread position: 87-302
Cow position: chrX:30832902-30833103 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 62

Conread position: 87-306
Cow position: chrX:45403882-45404104 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 184

Conread position: 87-309
Cow position: chrX:40183398-40183623 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 184

Conread position: 87-313
Cow position: chrX:35413565-35413353 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 180, 60

Conread position: 87-314
Cow position: chrX:8925646-8925428 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 159, 75

Conread position: 87-316
Cow position: chrX:8731032-8730799 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 185

Conread position: 87-316
Cow position: chrX:9997390-9997611 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 87-317
Cow position: chrX:42874929-42874697 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 157

Conread position: 87-318
Cow position: chrX:16762716-16762490 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 89

Conread position: 87-319
Cow position: chrX:2467831-2467597 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 184

Conread position: 87-321
Cow position: chrX:42589811-42590043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 33

Conread position: 87-322
Cow position: chrX:46032775-46033004 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 54

Conread position: 87-322
Cow position: chrX:46722789-46723027 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 33, 184

Conread position: 87-323
Cow position: chrX:48195092-48195328 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 80

Conread position: 87-325
Cow position: chrX:22482741-22482978 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 69

Conread position: 87-327
Cow position: chrX:34454612-34454378 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 100

Conread position: 87-334
Cow position: chrX:19015383-19015144 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 87-335
Cow position: chrX:35273300-35273045 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 8

Conread position: 87-335
Cow position: chrX:44834864-44835115 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 90

Conread position: 87-338
Cow position: chrX:28157443-28157183 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 21

Conread position: 87-338
Cow position: chrX:30133375-30133626 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 72

Conread position: 87-338
Cow position: chrX:41123013-41122770 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 61

Conread position: 87-340
Cow position: chrX:38439423-38439169 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 182

Conread position: 87-341
Cow position: chrX:917420-917675 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 25

Conread position: 87-341
Cow position: chrX:3653704-3653458 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 87-341
Cow position: chrX:3654553-3654303 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 38

Conread position: 87-341
Cow position: chrX:10831548-10831817 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 196

Conread position: 87-341
Cow position: chrX:35387957-35388212 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 182

Conread position: 87-341
Cow position: chrX:35681286-35681030 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 84

Conread position: 87-341
Cow position: chrX:38964050-38963806 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 5, 45

Conread position: 87-341
Cow position: chrX:40480923-40481177 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 145

Conread position: 87-341
Cow position: chrX:41199052-41198781 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 70

Conread position: 87-341
Cow position: chrX:41743857-41743608 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 74

Conread position: 87-341
Cow position: chrX:42469997-42470242 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 87-342
Cow position: chrX:161358-161122 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 87-342
Cow position: chrX:1616099-1616357 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 104

Conread position: 87-342
Cow position: chrX:1810213-1810467 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 5, 34

Conread position: 87-342
Cow position: chrX:4123783-4123529 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 84

Conread position: 87-342
Cow position: chrX:4632904-4633157 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 32, 84

Conread position: 87-342
Cow position: chrX:5017469-5017712 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 87-342
Cow position: chrX:6544201-6543950 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 87-342
Cow position: chrX:7351246-7350996 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 127

Conread position: 87-342
Cow position: chrX:7571848-7571600 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 108, 35

Conread position: 87-342
Cow position: chrX:7646201-7645952 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 152, 80

Conread position: 87-342
Cow position: chrX:7718801-7718550 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 54

Conread position: 87-342
Cow position: chrX:8797198-8796945 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 148

Conread position: 87-342
Cow position: chrX:8899975-8899718 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 183

Conread position: 87-342
Cow position: chrX:11562101-11561837 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 143

Conread position: 87-342
Cow position: chrX:11581889-11581629 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 8

Conread position: 87-342
Cow position: chrX:11717843-11718086 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 87-342
Cow position: chrX:13647840-13648090 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 87-342
Cow position: chrX:14884013-14884270 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 87-342
Cow position: chrX:14924946-14924694 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 87-342
Cow position: chrX:14973795-14974034 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 61

Conread position: 87-342
Cow position: chrX:15139600-15139854 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 156, 84

Conread position: 87-342
Cow position: chrX:15147242-15147490 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 79

Conread position: 87-342
Cow position: chrX:15545839-15545591 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 64

Conread position: 87-342
Cow position: chrX:17498030-17497790 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 87-342
Cow position: chrX:18694979-18695227 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 158, 35

Conread position: 87-342
Cow position: chrX:19188883-19188630 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 61

Conread position: 87-342
Cow position: chrX:19196567-19196824 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 183

Conread position: 87-342
Cow position: chrX:21593233-21592980 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 182

Conread position: 87-342
Cow position: chrX:23061391-23061148 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 87-342
Cow position: chrX:23563845-23564103 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 87-342
Cow position: chrX:28105865-28105620 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 38

Conread position: 87-342
Cow position: chrX:30162942-30162691 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 82

Conread position: 87-342
Cow position: chrX:30543343-30543588 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 35

Conread position: 87-342
Cow position: chrX:33855288-33855546 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 178, 76

Conread position: 87-342
Cow position: chrX:34192618-34192375 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 87-342
Cow position: chrX:34532466-34532225 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 153, 66

Conread position: 87-342
Cow position: chrX:34565226-34564994 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 87-342
Cow position: chrX:35288601-35288354 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 87-342
Cow position: chrX:35937135-35937375 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 87-342
Cow position: chrX:37232358-37232105 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 179

Conread position: 87-342
Cow position: chrX:38094576-38094831 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 118

Conread position: 87-342
Cow position: chrX:38218655-38218412 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 35

Conread position: 87-342
Cow position: chrX:38227147-38227396 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 80

Conread position: 87-342
Cow position: chrX:38936642-38936393 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 181, 31

Conread position: 87-342
Cow position: chrX:40557736-40557982 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 87-342
Cow position: chrX:40826806-40827053 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 72

Conread position: 87-342
Cow position: chrX:41790500-41790746 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 86, 8

Conread position: 87-342
Cow position: chrX:42461799-42462054 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 86, 59

Conread position: 87-342
Cow position: chrX:42587483-42587735 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 33

Conread position: 87-342
Cow position: chrX:44054752-44054499 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 87

Conread position: 87-342
Cow position: chrX:45089394-45089131 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 133

Conread position: 87-342
Cow position: chrX:47210898-47211156 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 184

Conread position: 87-342
Cow position: chrX:47873391-47873647 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 67

Conread position: 87-342
Cow position: chrX:48248770-48248517 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 81

Conread position: 87-342
Cow position: chrX:48287504-48287746 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 66

Conread position: 87-344
Cow position: chrX:45414355-45414608 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 87-349
Cow position: chrX:45113564-45113324 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 62

Conread position: 87-352
Cow position: chrX:6413993-6413731 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 40, 80

Conread position: 87-352
Cow position: chrX:11656037-11655764 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 183

Conread position: 87-352
Cow position: chrX:17794928-17794680 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 87-352
Cow position: chrX:34502867-34502608 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 85, 152

Conread position: 87-352
Cow position: chrX:40269433-40269161 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 189

Conread position: 87-354
Cow position: chrX:5118557-5118800 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 227, 69

Conread position: 87-355
Cow position: chrX:14781393-14781663 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 184

Conread position: 87-355
Cow position: chrX:32743480-32743220 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 65

Conread position: 87-356
Cow position: chrX:47967546-47967281 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 63

Conread position: 87-357
Cow position: chrX:23583507-23583238 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 37, 13

Conread position: 87-357
Cow position: chrX:27705532-27705273 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 75

Conread position: 87-357
Cow position: chrX:31250332-31250072 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 87, 32

Conread position: 87-357
Cow position: chrX:35609934-35609666 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 86

Conread position: 87-357
Cow position: chrX:42171351-42171616 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 154

Conread position: 87-358
Cow position: chrX:34990981-34990720 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 85

Conread position: 87-361
Cow position: chrX:28111452-28111171 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 82

Conread position: 87-362
Cow position: chrX:20339944-20340217 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 47

Conread position: 87-385
Cow position: chrX:12309440-12309736 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 87-386
Cow position: chrX:5872266-5871966 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 185

Conread position: 87-393
Cow position: chrX:151850-151544 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 89

Conread position: 87-393
Cow position: chrX:11806068-11806370 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 181

Conread position: 87-393
Cow position: chrX:34401943-34401644 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 84

Conread position: 88-240
Cow position: chrX:29770229-29770384 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 88-243
Cow position: chrX:38853142-38852988 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 88-259
Cow position: chrX:13191600-13191768 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 88-260
Cow position: chrX:4750360-4750523 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 88-276
Cow position: chrX:22624423-22624239 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 28

Conread position: 88-276
Cow position: chrX:26875937-26876121 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 9, 85

Conread position: 88-276
Cow position: chrX:46984547-46984742 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 66

Conread position: 88-317
Cow position: chrX:37836533-37836308 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 65

Conread position: 88-330
Cow position: chrX:28098062-28097832 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 25

Conread position: 88-335
Cow position: chrX:41526577-41526818 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 104

Conread position: 88-342
Cow position: chrX:4043910-4044164 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 35

Conread position: 88-342
Cow position: chrX:7509086-7508820 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 118

Conread position: 88-342
Cow position: chrX:7695693-7695458 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 37, 80

Conread position: 88-342
Cow position: chrX:10437715-10437957 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 88

Conread position: 88-342
Cow position: chrX:11082670-11082920 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 233, 83

Conread position: 88-342
Cow position: chrX:11844300-11844544 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 83

Conread position: 88-342
Cow position: chrX:24125124-24125377 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 12

Conread position: 88-342
Cow position: chrX:26625726-26625991 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 88-342
Cow position: chrX:31442877-31443126 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 84

Conread position: 88-342
Cow position: chrX:34238665-34238414 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 88-342
Cow position: chrX:40452265-40452519 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 180

Conread position: 88-342
Cow position: chrX:45968104-45967856 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 50

Conread position: 88-342
Cow position: chrX:48371044-48370790 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 88-343
Cow position: chrX:42492569-42492837 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 82

Conread position: 88-356
Cow position: chrX:878433-878688 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 242, 60

Conread position: 88-357
Cow position: chrX:45502095-45501828 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 88-361
Cow position: chrX:15596988-15596720 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 156

Conread position: 88-363
Cow position: chrX:20582972-20582703 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 89-276
Cow position: chrX:23970327-23970149 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 89-341
Cow position: chrX:5423118-5423371 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 180

Conread position: 89-342
Cow position: chrX:22538008-22538260 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 59

Conread position: 89-343
Cow position: chrX:47481745-47481493 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 79

Conread position: 90-277
Cow position: chrX:2383429-2383246 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 14

Conread position: 90-277
Cow position: chrX:19930597-19930416 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 90-341
Cow position: chrX:2786613-2786851 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 178, 35

Conread position: 90-342
Cow position: chrX:7806322-7806072 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 14

Conread position: 90-342
Cow position: chrX:20710015-20709769 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 83, 10

Conread position: 90-342
Cow position: chrX:25232531-25232280 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 177, 7

Conread position: 90-357
Cow position: chrX:22813008-22812742 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 91-265
Cow position: chrX:9201490-9201317 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 5

Conread position: 91-341
Cow position: chrX:5599033-5599283 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 5

Conread position: 91-357
Cow position: chrX:15485684-15485945 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 5

Conread position: 91-361
Cow position: chrX:4996540-4996291 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 92-335
Cow position: chrX:1176039-1176273 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 142

Conread position: 92-340
Cow position: chrX:31948993-31949235 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 45

Conread position: 92-341
Cow position: chrX:30052528-30052774 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 194, 81

Conread position: 92-341
Cow position: chrX:36778352-36778100 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 36, 178

Conread position: 92-342
Cow position: chrX:28866059-28866295 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 93-309
Cow position: chrX:37416133-37416348 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 80

Conread position: 93-341
Cow position: chrX:20653338-20653088 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 6, 17

Conread position: 93-342
Cow position: chrX:16289618-16289868 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 32, 176

Conread position: 94-342
Cow position: chrX:9096608-9096361 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 60

Conread position: 94-342
Cow position: chrX:22493950-22493701 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 175

Conread position: 94-342
Cow position: chrX:40648591-40648360 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 75

Conread position: 95-289
Cow position: chrX:48536725-48536919 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 135

Conread position: 95-341
Cow position: chrX:24105565-24105321 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 75

Conread position: 96-319
Cow position: chrX:10293221-10293445 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 173

Conread position: 96-321
Cow position: chrX:48227673-48227900 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 80

Conread position: 96-339
Cow position: chrX:2362440-2362196 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 173

Conread position: 96-339
Cow position: chrX:13448211-13447967 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 173

Conread position: 96-340
Cow position: chrX:44852035-44851786 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 177

Conread position: 96-341
Cow position: chrX:6195813-6196059 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 173

Conread position: 96-341
Cow position: chrX:10992558-10992313 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 172

Conread position: 96-341
Cow position: chrX:15505232-15504986 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 173

Conread position: 96-341
Cow position: chrX:16735465-16735219 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 59

Conread position: 96-341
Cow position: chrX:22557442-22557196 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 173

Conread position: 96-341
Cow position: chrX:30941122-30940876 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 173

Conread position: 96-341
Cow position: chrX:36196033-36195787 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 173

Conread position: 96-342
Cow position: chrX:17783440-17783193 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 173

Conread position: 96-342
Cow position: chrX:44731534-44731294 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 77, 167

Conread position: 96-343
Cow position: chrX:45430080-45430325 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 50, 68

Conread position: 96-362
Cow position: chrX:16279590-16279323 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 173

Conread position: 97-276
Cow position: chrX:38642199-38642020 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 141

Conread position: 97-276
Cow position: chrX:44961684-44961507 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 50

Conread position: 97-314
Cow position: chrX:23702825-23703043 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 172

Conread position: 97-326
Cow position: chrX:24904024-24903794 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 122

Conread position: 97-341
Cow position: chrX:1781846-1781600 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 173

Conread position: 97-341
Cow position: chrX:2417544-2417789 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:2664949-2664704 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:3078648-3078892 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 102

Conread position: 97-341
Cow position: chrX:3157558-3157313 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:3658114-3658359 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:5646164-5646409 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:7311933-7311688 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:9018363-9018608 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:10444474-10444720 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:10496173-10495928 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:11358125-11358370 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:11664118-11663873 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:11860302-11860547 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:12001207-12001452 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:12032911-12032666 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:15090827-15091071 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:15346029-15346274 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:19495020-19495265 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:19774540-19774785 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:20616857-20617102 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:22608652-22608897 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:23047718-23047475 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 77

Conread position: 97-341
Cow position: chrX:23109699-23109457 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:23140249-23140008 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 171

Conread position: 97-341
Cow position: chrX:23235770-23235525 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:27404006-27404250 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:28057855-28058100 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:28555495-28555740 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:30538212-30538457 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:30899447-30899693 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:31605624-31605379 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:32038903-32039148 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:36820292-36820537 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:37060851-37061096 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:37497507-37497752 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:37772493-37772739 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 173

Conread position: 97-341
Cow position: chrX:37958437-37958192 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:39667253-39667498 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:41488225-41488470 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 173

Conread position: 97-341
Cow position: chrX:44168369-44168614 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 172

Conread position: 97-341
Cow position: chrX:48165463-48165218 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 133

Conread position: 97-342
Cow position: chrX:15007214-15007457 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 100

Conread position: 97-342
Cow position: chrX:30686653-30686902 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 175

Conread position: 97-342
Cow position: chrX:45263129-45263374 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 101

Conread position: 97-354
Cow position: chrX:361513-361770 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 172

Conread position: 97-362
Cow position: chrX:31436413-31436154 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 132, 70

Conread position: 97-371
Cow position: chrX:1749569-1749844 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 122

Conread position: 97-384
Cow position: chrX:24577625-24577913 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 172

Conread position: 97-388
Cow position: chrX:27469714-27470008 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 172

Conread position: 97-393
Cow position: chrX:29844536-29844831 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 172

Conread position: 98-256
Cow position: chrX:37574785-37574635 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 98-265
Cow position: chrX:42381166-42381330 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 23, 52

Conread position: 98-289
Cow position: chrX:46381842-46382029 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 49

Conread position: 98-341
Cow position: chrX:13177531-13177762 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 170, 67

Conread position: 98-342
Cow position: chrX:45373354-45373598 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 120

Conread position: 98-361
Cow position: chrX:16706741-16706475 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 171

Conread position: 98-388
Cow position: chrX:16714135-16713846 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 14

Conread position: 100-238
Cow position: chrX:29544945-29545083 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 87

Conread position: 100-263
Cow position: chrX:14900791-14900949 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 100-265
Cow position: chrX:877094-877253 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 43

Conread position: 100-310
Cow position: chrX:45694038-45693832 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 22

Conread position: 100-313
Cow position: chrX:27751301-27751512 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 24

Conread position: 100-322
Cow position: chrX:16807818-16808042 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 169

Conread position: 100-323
Cow position: chrX:29066374-29066154 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 73

Conread position: 100-327
Cow position: chrX:35042157-35041931 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 170

Conread position: 100-335
Cow position: chrX:14222016-14221784 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 156

Conread position: 100-338
Cow position: chrX:15577704-15577943 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 169

Conread position: 100-339
Cow position: chrX:1331872-1331629 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 100-339
Cow position: chrX:6037985-6038225 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 92

Conread position: 100-340
Cow position: chrX:42591662-42591421 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-340
Cow position: chrX:46297597-46297356 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 93

Conread position: 100-340
Cow position: chrX:47344230-47343988 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 43

Conread position: 100-341
Cow position: chrX:1576326-1576568 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:2160702-2160460 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:2559027-2559265 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 129

Conread position: 100-341
Cow position: chrX:4622017-4622259 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:5112619-5112861 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:5867082-5866841 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 91

Conread position: 100-341
Cow position: chrX:8641724-8641483 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:10527838-10528079 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 91

Conread position: 100-341
Cow position: chrX:10932609-10932367 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:13396315-13396557 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:14463250-14463008 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 119

Conread position: 100-341
Cow position: chrX:15259682-15259924 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 168

Conread position: 100-341
Cow position: chrX:23987181-23986940 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:26974847-26974605 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:27422345-27422586 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 147

Conread position: 100-341
Cow position: chrX:27594245-27594485 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:29169397-29169639 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-341
Cow position: chrX:47608351-47608109 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:671072-671315 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:2104338-2104099 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 73

Conread position: 100-342
Cow position: chrX:3895039-3895282 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 170

Conread position: 100-342
Cow position: chrX:5123424-5123667 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 169

Conread position: 100-342
Cow position: chrX:5306536-5306293 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:5739276-5739519 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 169

Conread position: 100-342
Cow position: chrX:6373117-6372875 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 66

Conread position: 100-342
Cow position: chrX:6869625-6869869 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 171

Conread position: 100-342
Cow position: chrX:12249736-12249495 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 69

Conread position: 100-342
Cow position: chrX:13971290-13971533 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:15531218-15531461 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:17055506-17055263 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:19290699-19290466 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 69

Conread position: 100-342
Cow position: chrX:21011384-21011628 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 171

Conread position: 100-342
Cow position: chrX:22078264-22078021 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:22772592-22772349 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:26229577-26229814 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 73

Conread position: 100-342
Cow position: chrX:26276076-26275833 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:27976894-27977135 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 50

Conread position: 100-342
Cow position: chrX:28134277-28134043 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 20

Conread position: 100-342
Cow position: chrX:29084057-29083819 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 128

Conread position: 100-342
Cow position: chrX:29903680-29903436 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 170

Conread position: 100-342
Cow position: chrX:30171773-30172016 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:30531091-30531338 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 173

Conread position: 100-342
Cow position: chrX:32010968-32010725 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:34762003-34761760 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 12

Conread position: 100-342
Cow position: chrX:35533788-35533545 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:39174281-39174519 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 72

Conread position: 100-342
Cow position: chrX:39704631-39704399 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 43

Conread position: 100-342
Cow position: chrX:42779189-42779432 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:43979557-43979312 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 171

Conread position: 100-342
Cow position: chrX:44558016-44557773 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:44980101-44980343 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 168

Conread position: 100-342
Cow position: chrX:45237403-45237160 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:45904115-45903872 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 100-342
Cow position: chrX:47385995-47386237 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-349
Cow position: chrX:42166012-42165763 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-352
Cow position: chrX:4869480-4869228 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 169

Conread position: 100-352
Cow position: chrX:7445020-7444769 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 66

Conread position: 100-352
Cow position: chrX:18655868-18656120 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 169

Conread position: 100-352
Cow position: chrX:26759632-26759884 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 169

Conread position: 100-355
Cow position: chrX:8530477-8530222 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 169

Conread position: 100-355
Cow position: chrX:37816525-37816270 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:3417203-3417459 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 66

Conread position: 100-357
Cow position: chrX:9012264-9012007 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:14800881-14801138 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 66

Conread position: 100-357
Cow position: chrX:15114608-15114351 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:15438716-15438969 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 156

Conread position: 100-357
Cow position: chrX:20742923-20742666 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:26492939-26492682 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:27305863-27305606 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 170

Conread position: 100-357
Cow position: chrX:27627292-27627035 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:39714486-39714229 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:42994549-42994294 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 95

Conread position: 100-357
Cow position: chrX:43101464-43101208 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 169

Conread position: 100-357
Cow position: chrX:46578918-46579175 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 100-361
Cow position: chrX:11725326-11725591 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 248

Conread position: 100-361
Cow position: chrX:23216044-23215783 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 100-361
Cow position: chrX:27106195-27105934 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 169

Conread position: 100-362
Cow position: chrX:18223349-18223087 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 147

Conread position: 100-362
Cow position: chrX:20320831-20321092 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 141

Conread position: 100-363
Cow position: chrX:828824-828566 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 34

Conread position: 100-366
Cow position: chrX:8782681-8782418 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 169

Conread position: 100-379
Cow position: chrX:37489660-37489376 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 66

Conread position: 100-390
Cow position: chrX:22567469-22567179 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 169

Conread position: 100-392
Cow position: chrX:28632551-28632830 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 101-271
Cow position: chrX:7721920-7721748 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 101-273
Cow position: chrX:27680330-27680164 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 166, 67

Conread position: 101-276
Cow position: chrX:38935219-38935041 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 170

Conread position: 101-277
Cow position: chrX:21663246-21663068 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 127

Conread position: 101-336
Cow position: chrX:33020419-33020186 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 70

Conread position: 101-340
Cow position: chrX:25741178-25741418 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 168

Conread position: 101-340
Cow position: chrX:41733259-41733491 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 185, 33

Conread position: 101-341
Cow position: chrX:29780676-29780440 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 80

Conread position: 101-342
Cow position: chrX:3464142-3464382 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 101

Conread position: 101-342
Cow position: chrX:3648881-3649114 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 33

Conread position: 101-342
Cow position: chrX:29864493-29864737 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 149

Conread position: 101-342
Cow position: chrX:34754256-34754498 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 168

Conread position: 101-342
Cow position: chrX:35409592-35409362 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 69

Conread position: 101-342
Cow position: chrX:38051498-38051738 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 93

Conread position: 101-342
Cow position: chrX:44096488-44096247 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 167

Conread position: 101-357
Cow position: chrX:21064217-21063966 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 19, 70

Conread position: 101-357
Cow position: chrX:22888595-22888338 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 169

Conread position: 101-357
Cow position: chrX:28517789-28518043 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 151

Conread position: 101-365
Cow position: chrX:25575895-25575634 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 66

Conread position: 101-393
Cow position: chrX:20697673-20697957 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 74

Conread position: 102-332
Cow position: chrX:16478837-16478606 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 167

Conread position: 102-339
Cow position: chrX:5288752-5288990 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:3388040-3387801 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 6

Conread position: 102-341
Cow position: chrX:9168679-9168919 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:12146029-12145790 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:15008497-15008737 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:16286144-16285904 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:19022375-19022614 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 6

Conread position: 102-341
Cow position: chrX:19473225-19473466 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 168

Conread position: 102-341
Cow position: chrX:22613321-22613081 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:24509802-24509562 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:24968881-24969121 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 169

Conread position: 102-341
Cow position: chrX:25288744-25288984 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:35803749-35803509 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:36479867-36479627 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:36730321-36730079 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 169

Conread position: 102-341
Cow position: chrX:39731448-39731208 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 167

Conread position: 102-341
Cow position: chrX:42121238-42120998 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 167

Conread position: 102-342
Cow position: chrX:11145403-11145644 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 128

Conread position: 102-355
Cow position: chrX:38015029-38014776 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 167

Conread position: 102-361
Cow position: chrX:27590105-27590357 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 167

Conread position: 103-314
Cow position: chrX:33983673-33983884 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 5

Conread position: 103-333
Cow position: chrX:35498019-35497789 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 5

Conread position: 103-339
Cow position: chrX:30197230-30196994 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:1975664-1975902 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:10922638-10922876 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:15589941-15590177 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 50

Conread position: 103-341
Cow position: chrX:15781514-15781276 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:20099255-20099017 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:24967202-24966964 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:30966034-30965796 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:34095494-34095256 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 5

Conread position: 103-341
Cow position: chrX:37403088-37403328 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 167

Conread position: 103-342
Cow position: chrX:8434273-8434513 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 166

Conread position: 104-262
Cow position: chrX:13245522-13245364 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 90

Conread position: 104-289
Cow position: chrX:11073261-11073444 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 35

Conread position: 104-327
Cow position: chrX:25238105-25237887 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 65

Conread position: 104-341
Cow position: chrX:1055462-1055698 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 58

Conread position: 104-341
Cow position: chrX:5638237-5638473 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 47

Conread position: 104-342
Cow position: chrX:11674993-11674752 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 133, 64

Conread position: 104-342
Cow position: chrX:11982061-11981815 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 13

Conread position: 104-342
Cow position: chrX:24201114-24200892 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 63

Conread position: 104-342
Cow position: chrX:32623514-32623259 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 69, 156

Conread position: 104-342
Cow position: chrX:43647816-43648050 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 136, 13

Conread position: 104-342
Cow position: chrX:45043493-45043252 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 151

Conread position: 104-362
Cow position: chrX:25848848-25848589 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 140

Conread position: 105-338
Cow position: chrX:48243534-48243754 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 105-341
Cow position: chrX:32978326-32978562 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 63

Conread position: 105-342
Cow position: chrX:6012177-6012413 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 8

Conread position: 105-342
Cow position: chrX:12437325-12437542 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 105-342
Cow position: chrX:12826678-12826441 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 161

Conread position: 105-342
Cow position: chrX:22329642-22329876 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 174, 63

Conread position: 105-342
Cow position: chrX:25713724-25713503 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 111

Conread position: 105-342
Cow position: chrX:39546044-39546279 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 55

Conread position: 105-342
Cow position: chrX:44087237-44086998 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 165

Conread position: 105-357
Cow position: chrX:13868621-13868377 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 64

Conread position: 106-276
Cow position: chrX:33632104-33631934 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 14

Conread position: 106-293
Cow position: chrX:8558533-8558721 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 85

Conread position: 106-341
Cow position: chrX:31260700-31260936 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 67, 162

Conread position: 106-342
Cow position: chrX:25283224-25283446 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 106-342
Cow position: chrX:48489953-48490190 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 166

Conread position: 106-357
Cow position: chrX:42507720-42507964 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 67

Conread position: 107-257
Cow position: chrX:23017932-23017780 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 10

Conread position: 107-264
Cow position: chrX:1728493-1728646 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 65

Conread position: 107-342
Cow position: chrX:32310034-32309795 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 8

Conread position: 108-276
Cow position: chrX:7425393-7425222 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 86

Conread position: 108-340
Cow position: chrX:39701154-39700914 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 138

Conread position: 108-342
Cow position: chrX:45466166-45465928 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 37

Conread position: 108-352
Cow position: chrX:21795420-21795178 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 20, 65

Conread position: 109-276
Cow position: chrX:16284022-16284187 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 109-277
Cow position: chrX:9635258-9635422 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 109-277
Cow position: chrX:10107050-10107216 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 76

Conread position: 109-292
Cow position: chrX:31745122-31745305 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 18

Conread position: 109-298
Cow position: chrX:488414-488228 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 109-298
Cow position: chrX:31473450-31473260 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 160

Conread position: 109-327
Cow position: chrX:48676000-48675785 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 180, 59

Conread position: 109-331
Cow position: chrX:6607346-6607114 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 132

Conread position: 109-332
Cow position: chrX:37299523-37299300 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 138

Conread position: 109-337
Cow position: chrX:17271362-17271590 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 159

Conread position: 109-338
Cow position: chrX:19690144-19689910 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 132

Conread position: 109-342
Cow position: chrX:3154321-3154556 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 63

Conread position: 109-342
Cow position: chrX:7382246-7382018 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 109-342
Cow position: chrX:9227055-9227290 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 127

Conread position: 109-342
Cow position: chrX:25338106-25337871 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 109-342
Cow position: chrX:33827095-33827338 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 109-342
Cow position: chrX:43527426-43527197 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 109-342
Cow position: chrX:47744001-47743771 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 13

Conread position: 109-362
Cow position: chrX:36840798-36840541 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 13

Conread position: 110-265
Cow position: chrX:18456318-18456162 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 84

Conread position: 110-276
Cow position: chrX:19210470-19210636 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 69

Conread position: 110-313
Cow position: chrX:29925658-29925853 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 110-341
Cow position: chrX:160111-160337 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 110-341
Cow position: chrX:10916671-10916449 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 110-342
Cow position: chrX:2523803-2524036 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 110-342
Cow position: chrX:9252254-9252480 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 12

Conread position: 111-273
Cow position: chrX:9838063-9837901 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 81

Conread position: 111-298
Cow position: chrX:47246991-47247171 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 111-341
Cow position: chrX:5893154-5892923 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 158

Conread position: 111-341
Cow position: chrX:29877255-29877486 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 158

Conread position: 111-342
Cow position: chrX:26883211-26883455 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 169, 61

Conread position: 112-341
Cow position: chrX:29049884-29049670 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 112-342
Cow position: chrX:31373486-31373272 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 39

Conread position: 113-264
Cow position: chrX:18812175-18812029 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 60

Conread position: 113-324
Cow position: chrX:31294638-31294828 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 113-342
Cow position: chrX:25924615-25924843 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 9

Conread position: 113-342
Cow position: chrX:40515813-40515597 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 115-255
Cow position: chrX:23091798-23091661 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 115-342
Cow position: chrX:4404457-4404229 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 154

Conread position: 115-342
Cow position: chrX:48204990-48205219 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 155

Conread position: 115-353
Cow position: chrX:14152295-14152531 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 28

Conread position: 116-297
Cow position: chrX:45959140-45959321 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 152

Conread position: 116-338
Cow position: chrX:2812491-2812713 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 153

Conread position: 117-339
Cow position: chrX:24735858-24735635 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 152

Conread position: 117-342
Cow position: chrX:25617993-25618224 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 117-357
Cow position: chrX:28513991-28513752 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 17

Conread position: 117-361
Cow position: chrX:30919473-30919718 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 151

Conread position: 117-361
Cow position: chrX:35632837-35633077 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 94, 50

Conread position: 118-297
Cow position: chrX:27509106-27509282 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 171, 50

Conread position: 118-342
Cow position: chrX:29289494-29289270 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 150

Conread position: 119-342
Cow position: chrX:33803096-33803321 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 149

Conread position: 121-339
Cow position: chrX:31489421-31489209 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 12

Conread position: 121-341
Cow position: chrX:46532595-46532825 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 52, 120

Conread position: 121-342
Cow position: chrX:12115950-12115735 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 51

Conread position: 122-263
Cow position: chrX:4482875-4482734 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 46

Conread position: 122-275
Cow position: chrX:9360796-9360644 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 73

Conread position: 122-276
Cow position: chrX:2029303-2029150 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 119

Conread position: 122-285
Cow position: chrX:45787561-45787405 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 122-299
Cow position: chrX:8517787-8517613 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 70

Conread position: 122-304
Cow position: chrX:38840799-38840617 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 12

Conread position: 122-313
Cow position: chrX:48211066-48211258 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 148

Conread position: 122-326
Cow position: chrX:4269157-4269357 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 109, 46

Conread position: 122-335
Cow position: chrX:1978425-1978197 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 88

Conread position: 122-335
Cow position: chrX:14908928-14908717 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 118

Conread position: 122-340
Cow position: chrX:42585161-42585370 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 122-341
Cow position: chrX:18462061-18462280 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 52, 146

Conread position: 122-341
Cow position: chrX:24447715-24447496 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 146

Conread position: 122-342
Cow position: chrX:126701-126485 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 31

Conread position: 122-342
Cow position: chrX:4325579-4325803 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 150

Conread position: 122-342
Cow position: chrX:9161495-9161282 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 122-342
Cow position: chrX:21665684-21665897 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 122-342
Cow position: chrX:25301841-25302058 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 79, 50

Conread position: 122-342
Cow position: chrX:25419248-25419466 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 119

Conread position: 122-342
Cow position: chrX:26619451-26619667 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 166, 118

Conread position: 122-342
Cow position: chrX:34009660-34009444 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 122-342
Cow position: chrX:38794639-38794419 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 46

Conread position: 122-342
Cow position: chrX:40364879-40365101 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 70

Conread position: 122-342
Cow position: chrX:41192596-41192384 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 61

Conread position: 122-349
Cow position: chrX:46771058-46771284 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 51

Conread position: 122-357
Cow position: chrX:20887736-20887964 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 46

Conread position: 122-357
Cow position: chrX:40105777-40106006 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 90

Conread position: 122-359
Cow position: chrX:25205632-25205388 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 232

Conread position: 122-361
Cow position: chrX:42841137-42841377 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 73

Conread position: 122-378
Cow position: chrX:36693145-36692894 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 46

Conread position: 123-307
Cow position: chrX:22815854-22815670 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 145

Conread position: 123-327
Cow position: chrX:5507587-5507385 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 127

Conread position: 123-340
Cow position: chrX:21255949-21255733 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 106

Conread position: 123-340
Cow position: chrX:27319129-27318911 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 145

Conread position: 123-341
Cow position: chrX:31202753-31202535 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 145

Conread position: 123-342
Cow position: chrX:2425209-2425428 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 145

Conread position: 123-342
Cow position: chrX:5376282-5376063 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 91

Conread position: 123-342
Cow position: chrX:10415618-10415832 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 123-342
Cow position: chrX:15119976-15120195 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 145

Conread position: 123-342
Cow position: chrX:22811798-22811580 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 125

Conread position: 123-342
Cow position: chrX:23316508-23316726 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 147

Conread position: 123-342
Cow position: chrX:24587541-24587760 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 145

Conread position: 123-342
Cow position: chrX:27446599-27446385 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 29

Conread position: 123-342
Cow position: chrX:30143372-30143590 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 145

Conread position: 123-342
Cow position: chrX:30163327-30163544 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 74

Conread position: 123-342
Cow position: chrX:47361973-47362192 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 146

Conread position: 123-343
Cow position: chrX:11313869-11314085 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 45

Conread position: 123-357
Cow position: chrX:5353390-5353623 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 91

Conread position: 123-357
Cow position: chrX:25329925-25329693 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 48

Conread position: 124-339
Cow position: chrX:4629777-4629994 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 146

Conread position: 124-340
Cow position: chrX:44930547-44930330 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 144

Conread position: 124-342
Cow position: chrX:39386354-39386571 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 144

Conread position: 124-357
Cow position: chrX:6659287-6659055 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 84

Conread position: 124-357
Cow position: chrX:33823011-33822784 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 51

Conread position: 124-404
Cow position: chrX:22873310-22873032 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 145

Conread position: 127-314
Cow position: chrX:34175289-34175476 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 141

Conread position: 127-319
Cow position: chrX:17605652-17605844 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 141

Conread position: 127-322
Cow position: chrX:20021472-20021277 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:3371949-3372162 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:5279945-5280158 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 60

Conread position: 127-341
Cow position: chrX:6566983-6566769 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 65

Conread position: 127-341
Cow position: chrX:6652163-6652377 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:7118735-7118949 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 141

Conread position: 127-341
Cow position: chrX:7510045-7509832 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 37

Conread position: 127-341
Cow position: chrX:7742548-7742762 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:9085424-9085638 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:9154269-9154055 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:10351770-10351556 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:11672690-11672476 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:12360798-12360584 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:12851041-12850827 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:13070693-13070906 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:13091253-13091466 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:13196062-13196276 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:13385316-13385102 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:16074485-16074271 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:17980504-17980290 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:17995368-17995154 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 141

Conread position: 127-341
Cow position: chrX:18024948-18024734 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:19109132-19109346 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:20031926-20032136 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 153, 26

Conread position: 127-341
Cow position: chrX:20376870-20376665 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 127-341
Cow position: chrX:21768713-21768499 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:23452689-23452903 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:24757788-24758002 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:24809062-24809275 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 84

Conread position: 127-341
Cow position: chrX:25276590-25276804 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:27759616-27759402 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 141

Conread position: 127-341
Cow position: chrX:29226385-29226171 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:29508686-29508478 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 142

Conread position: 127-341
Cow position: chrX:30752683-30752469 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 91

Conread position: 127-341
Cow position: chrX:30816360-30816574 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 91

Conread position: 127-341
Cow position: chrX:30822493-30822279 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:30863290-30863504 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:30950437-30950223 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:30981256-30981470 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:32331536-32331326 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 128

Conread position: 127-341
Cow position: chrX:34333291-34333505 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:34413685-34413471 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:34519635-34519421 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 141

Conread position: 127-341
Cow position: chrX:37764288-37764502 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-341
Cow position: chrX:43511328-43511115 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 141

Conread position: 127-341
Cow position: chrX:47318315-47318101 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-342
Cow position: chrX:3161109-3161322 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 41

Conread position: 127-342
Cow position: chrX:11715553-11715768 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 86

Conread position: 127-342
Cow position: chrX:24173259-24173474 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 142

Conread position: 127-342
Cow position: chrX:27459165-27458949 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 143

Conread position: 127-342
Cow position: chrX:30199083-30199298 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-342
Cow position: chrX:31813980-31814195 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 141

Conread position: 127-342
Cow position: chrX:32870878-32871092 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 127-342
Cow position: chrX:36240304-36240089 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 127-342
Cow position: chrX:38230358-38230573 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 141

Conread position: 127-342
Cow position: chrX:39549239-39549024 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 141

Conread position: 127-342
Cow position: chrX:43767628-43767843 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 141

Conread position: 127-342
Cow position: chrX:45420764-45420981 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 127-342
Cow position: chrX:45467310-45467526 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 143

Conread position: 127-352
Cow position: chrX:15560905-15561130 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 94

Conread position: 127-357
Cow position: chrX:9128965-9128736 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 141

Conread position: 127-357
Cow position: chrX:14135090-14134861 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 141

Conread position: 127-357
Cow position: chrX:29760608-29760379 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 65

Conread position: 127-367
Cow position: chrX:29356496-29356256 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 141

Conread position: 128-312
Cow position: chrX:16531901-16531723 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 128-338
Cow position: chrX:22568111-22568321 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 86

Conread position: 128-341
Cow position: chrX:6558761-6558545 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 143

Conread position: 128-342
Cow position: chrX:36534827-36535041 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 140

Conread position: 129-341
Cow position: chrX:12776080-12776291 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 14

Conread position: 129-341
Cow position: chrX:30021191-30021403 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 63

Conread position: 130-352
Cow position: chrX:41433521-41433735 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 22

Conread position: 133-342
Cow position: chrX:33205096-33205298 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 134-276
Cow position: chrX:33519519-33519375 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 134-309
Cow position: chrX:5856425-5856596 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 114

Conread position: 134-341
Cow position: chrX:5408957-5408750 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 134

Conread position: 134-341
Cow position: chrX:9593233-9593440 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 134

Conread position: 134-341
Cow position: chrX:11566816-11566609 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 134

Conread position: 134-342
Cow position: chrX:16853487-16853695 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 134

Conread position: 134-342
Cow position: chrX:24280837-24280629 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 134

Conread position: 134-342
Cow position: chrX:26753882-26754091 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 135

Conread position: 134-342
Cow position: chrX:32144267-32144469 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 134-342
Cow position: chrX:48134984-48135186 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 134-357
Cow position: chrX:10915940-10915718 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 134

Conread position: 134-357
Cow position: chrX:14134377-14134155 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 93

Conread position: 135-289
Cow position: chrX:25816003-25816149 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 135-313
Cow position: chrX:12018173-12017998 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 48

Conread position: 135-340
Cow position: chrX:38667719-38667938 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 146

Conread position: 135-341
Cow position: chrX:14458268-14458472 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 56

Conread position: 135-342
Cow position: chrX:40581891-40581686 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 49

Conread position: 136-291
Cow position: chrX:27176424-27176575 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 148, 32

Conread position: 136-332
Cow position: chrX:41885895-41886091 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 132

Conread position: 136-342
Cow position: chrX:12852610-12852815 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 112

Conread position: 136-342
Cow position: chrX:45412758-45412958 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 33

Conread position: 137-319
Cow position: chrX:13923317-13923144 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 81

Conread position: 137-341
Cow position: chrX:41303847-41304044 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 137-342
Cow position: chrX:5675804-5676004 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 10

Conread position: 137-342
Cow position: chrX:14261927-14262137 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 55

Conread position: 138-342
Cow position: chrX:19437182-19437393 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 103

Conread position: 138-357
Cow position: chrX:27442658-27442872 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 76

Conread position: 139-342
Cow position: chrX:40591583-40591380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 129

Conread position: 140-341
Cow position: chrX:6454591-6454390 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 128

Conread position: 142-342
Cow position: chrX:15620637-15620838 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 127

Conread position: 142-360
Cow position: chrX:7178798-7178589 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 42

Conread position: 143-341
Cow position: chrX:24467233-24467430 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 22

Conread position: 145-338
Cow position: chrX:9651155-9651347 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 28, 123

Conread position: 145-342
Cow position: chrX:22115391-22115588 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 107

Conread position: 146-342
Cow position: chrX:12290626-12290431 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 118

Conread position: 147-341
Cow position: chrX:2151044-2151237 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 139, 119

Conread position: 147-341
Cow position: chrX:6829025-6828830 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 121

Conread position: 147-341
Cow position: chrX:18451190-18451384 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 121

Conread position: 147-341
Cow position: chrX:30837262-30837068 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 121

Conread position: 147-342
Cow position: chrX:10718398-10718204 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 99

Conread position: 147-342
Cow position: chrX:24102868-24102673 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 121

Conread position: 147-342
Cow position: chrX:26754743-26754935 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 121

Conread position: 147-357
Cow position: chrX:14598734-14598525 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 121

Conread position: 147-357
Cow position: chrX:20038330-20038538 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 18

Conread position: 147-357
Cow position: chrX:29841280-29841489 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 121

Conread position: 148-340
Cow position: chrX:47219367-47219559 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 120

Conread position: 149-342
Cow position: chrX:3570336-3570145 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 149-342
Cow position: chrX:9898454-9898648 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 121

Conread position: 149-342
Cow position: chrX:32747547-32747352 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 121

Conread position: 150-342
Cow position: chrX:30060645-30060837 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 57

Conread position: 150-357
Cow position: chrX:2485745-2485951 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 118

Conread position: 152-312
Cow position: chrX:12314238-12314078 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 116

Conread position: 152-341
Cow position: chrX:7097341-7097153 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 116

Conread position: 152-341
Cow position: chrX:24320392-24320577 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 35

Conread position: 152-357
Cow position: chrX:21495642-21495438 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 116

Conread position: 152-357
Cow position: chrX:23135452-23135255 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 153-338
Cow position: chrX:21861791-21861977 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 26

Conread position: 153-338
Cow position: chrX:45932887-45932702 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 110

Conread position: 153-341
Cow position: chrX:27982263-27982450 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 63

Conread position: 153-342
Cow position: chrX:41846651-41846840 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 8

Conread position: 155-341
Cow position: chrX:5919353-5919165 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 105

Conread position: 155-342
Cow position: chrX:626164-626350 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 113

Conread position: 159-359
Cow position: chrX:616528-616725 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 110

Conread position: 162-357
Cow position: chrX:39555943-39556136 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 106

Conread position: 167-342
Cow position: chrX:12096380-12096553 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 168-342
Cow position: chrX:45410175-45410349 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 133, 99

Conread position: 172-341
Cow position: chrX:22325939-22325770 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 41

Conread position: 172-342
Cow position: chrX:21844500-21844328 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 54

Conread position: 172-342
Cow position: chrX:29723311-29723145 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 172-349
Cow position: chrX:24291819-24291995 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 172-357
Cow position: chrX:3207699-3207882 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 21

Conread position: 172-395
Cow position: chrX:3808271-3808050 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 172

Conread position: 173-339
Cow position: chrX:37079677-37079842 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 94

Conread position: 173-341
Cow position: chrX:26617059-26617226 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 94

Conread position: 173-341
Cow position: chrX:28588832-28588665 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 94

Conread position: 173-341
Cow position: chrX:39954676-39954843 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 94

Conread position: 173-342
Cow position: chrX:17692122-17691954 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 173-342
Cow position: chrX:38577394-38577227 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 173-357
Cow position: chrX:2351924-2351742 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 174-342
Cow position: chrX:8103232-8103399 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 175-342
Cow position: chrX:32214611-32214777 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 182-343
Cow position: chrX:31729309-31729151 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 58

Conread position: 182-357
Cow position: chrX:47379614-47379787 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 183-342
Cow position: chrX:525528-525370 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 187-361
Cow position: chrX:22284367-22284190 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 8

Conread position: 189-361
Cow position: chrX:24787875-24788040 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 191-341
Cow position: chrX:27020047-27019898 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 55

Conread position: 194-342
Cow position: chrX:45945471-45945327 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 194-359
Cow position: chrX:43115011-43114850 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 196-322
Cow position: chrX:17888197-17888072 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 197-342
Cow position: chrX:36794832-36794688 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 198-342
Cow position: chrX:11614557-11614415 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 207-341
Cow position: chrX:44192615-44192746 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 210-341
Cow position: chrX:38066888-38067018 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 210-342
Cow position: chrX:8326083-8325954 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 210-342
Cow position: chrX:42221747-42221874 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 212-357
Cow position: chrX:27117786-27117647 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 220-338
Cow position: chrX:47965170-47965287 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 220-341
Cow position: chrX:170134-170254 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 226-346
Cow position: chrX:10256335-10256452 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 229-355
Cow position: chrX:38852962-38852838 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 38

Conread position: 236-341
Cow position: chrX:10348035-10348139 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 236-341
Cow position: chrX:14008854-14008958 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 236-341
Cow position: chrX:24975736-24975632 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 31

Conread position: 236-341
Cow position: chrX:28314224-28314120 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 236-357
Cow position: chrX:17892342-17892223 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.