Cow genome map

Conread name: Ss1.1-unkn-F_1_A02.5

Conread position: 459-601
Cow position: chr23:29043402-29043545 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 12, 102

Conread position: 467-597
Cow position: chr23:344759-344630 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 473-601
Cow position: chr23:13408720-13408849 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 21

Conread position: 481-602
Cow position: chr23:25676230-25676112 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 14

Conread position: 482-601
Cow position: chr23:9733827-9733945 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 10

Conread position: 482-602
Cow position: chr23:2035286-2035167 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 21

Conread position: 483-595
Cow position: chr23:2472657-2472546 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 8

Conread position: 483-595
Cow position: chr23:4517170-4517281 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 8

Conread position: 483-595
Cow position: chr23:5623936-5623825 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-595
Cow position: chr23:19493497-19493608 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 20

Conread position: 483-595
Cow position: chr23:22170551-22170661 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 12

Conread position: 483-595
Cow position: chr23:25665180-25665068 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 79

Conread position: 483-595
Cow position: chr23:30633947-30633837 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 9

Conread position: 483-596
Cow position: chr23:32937570-32937458 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-596
Cow position: chr23:32940234-32940122 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-597
Cow position: chr23:40503059-40502945 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 77

Conread position: 483-600
Cow position: chr23:416595-416712 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 9

Conread position: 483-600
Cow position: chr23:21351311-21351195 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:610345-610462 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:954156-954039 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:1959771-1959888 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:2721361-2721478 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:2723390-2723507 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:3485085-3485202 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:3549551-3549434 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr23:3786076-3786193 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:3827446-3827329 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:4100522-4100639 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:4267080-4267197 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:4608962-4608845 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 20

Conread position: 483-601
Cow position: chr23:5441561-5441678 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:5458383-5458500 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:7392841-7392721 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 81

Conread position: 483-601
Cow position: chr23:9267218-9267102 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 483-601
Cow position: chr23:9518030-9517913 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:9712545-9712662 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:10840514-10840631 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:10874018-10873901 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:10936653-10936536 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:11080029-11080146 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:11782430-11782547 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:12864332-12864449 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:13519889-13520007 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 77

Conread position: 483-601
Cow position: chr23:14215590-14215473 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:14575856-14575973 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:15529229-15529346 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:15569206-15569323 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:16072660-16072778 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 21

Conread position: 483-601
Cow position: chr23:18367123-18367240 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:19316567-19316450 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:20541928-20542044 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 483-601
Cow position: chr23:21009330-21009447 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:25352004-25352121 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:26795253-26795370 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:26798252-26798135 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:26932659-26932541 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 9

Conread position: 483-601
Cow position: chr23:28084799-28084916 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:30622856-30622739 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 20

Conread position: 483-601
Cow position: chr23:31584946-31585063 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:33940702-33940585 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr23:36485388-36485271 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 8

Conread position: 483-601
Cow position: chr23:39389690-39389807 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:39745504-39745621 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:39784401-39784518 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:40710565-40710682 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr23:40773972-40774089 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 9

Conread position: 483-601
Cow position: chr23:41015573-41015690 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-602
Cow position: chr23:1545384-1545502 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-602
Cow position: chr23:8291094-8291211 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 483-602
Cow position: chr23:28118641-28118524 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 484-597
Cow position: chr23:10013979-10014092 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 78

Conread position: 484-597
Cow position: chr23:26305809-26305922 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 78

Conread position: 485-601
Cow position: chr23:22804163-22804278 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 7

Conread position: 485-601
Cow position: chr23:26742017-26741902 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 7

Conread position: 485-601
Cow position: chr23:39741524-39741409 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 7

Conread position: 485-602
Cow position: chr23:7844723-7844839 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 7

Conread position: 485-602
Cow position: chr23:39049974-39049860 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 486-595
Cow position: chr23:7311307-7311416 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 486-601
Cow position: chr23:1941583-1941698 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 74

Conread position: 486-601
Cow position: chr23:7324188-7324300 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 11

Conread position: 486-601
Cow position: chr23:10852489-10852604 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 74

Conread position: 486-601
Cow position: chr23:14386061-14385947 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 6

Conread position: 486-601
Cow position: chr23:20152574-20152459 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 74

Conread position: 486-602
Cow position: chr23:7374315-7374431 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 486-602
Cow position: chr23:13511171-13511287 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 76

Conread position: 487-601
Cow position: chr23:25192767-25192653 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 75

Conread position: 498-601
Cow position: chr23:977394-977289 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 66

Conread position: 498-601
Cow position: chr23:1647064-1647169 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 62

Conread position: 500-601
Cow position: chr23:26230774-26230875 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 59

Conread position: 501-597
Cow position: chr23:29446294-29446198 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr23:2528735-2528636 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 501-601
Cow position: chr23:11070725-11070825 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 59

Conread position: 501-602
Cow position: chr23:9598979-9599080 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 61

Conread position: 501-602
Cow position: chr23:26318871-26318972 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 59

Conread position: 502-592
Cow position: chr23:25357995-25358085 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 58

Conread position: 502-602
Cow position: chr23:29033690-29033791 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 59

Conread position: 503-602
Cow position: chr23:11209447-11209546 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 58

Conread position: 504-602
Cow position: chr23:36462871-36462773 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 58

Show alignments to all cow chromosomes.