Cow genome map

Conread name: Ss1.1-unkn-F_1_A02.5

Conread position: 460-601
Cow position: chr24:18266781-18266639 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 103

Conread position: 467-582
Cow position: chr24:18742168-18742054 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 476-599
Cow position: chr24:11886562-11886686 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 87

Conread position: 477-601
Cow position: chr24:15875082-15875205 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 19

Conread position: 481-601
Cow position: chr24:22954288-22954406 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 19

Conread position: 483-595
Cow position: chr24:24818858-24818748 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 483-595
Cow position: chr24:25710302-25710191 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-595
Cow position: chr24:27345159-27345048 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-595
Cow position: chr24:35625096-35624985 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-597
Cow position: chr24:5608080-5607965 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 79

Conread position: 483-597
Cow position: chr24:23616101-23616214 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 9

Conread position: 483-597
Cow position: chr24:32609044-32609158 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 77

Conread position: 483-600
Cow position: chr24:42694002-42693886 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:2118607-2118724 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:4637683-4637566 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:6067610-6067493 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:7596826-7596709 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:7782394-7782277 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:7986479-7986362 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr24:8754252-8754369 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:8847973-8848090 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:9044960-9044843 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:9366064-9365947 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:10035307-10035190 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr24:10243825-10243708 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 8

Conread position: 483-601
Cow position: chr24:11081046-11080929 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:11104415-11104298 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 11

Conread position: 483-601
Cow position: chr24:11207870-11207753 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:11311788-11311671 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 9

Conread position: 483-601
Cow position: chr24:11748373-11748256 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 8

Conread position: 483-601
Cow position: chr24:12146853-12146736 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 8

Conread position: 483-601
Cow position: chr24:12377379-12377263 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 483-601
Cow position: chr24:12447228-12447345 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 9

Conread position: 483-601
Cow position: chr24:12518550-12518667 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:13497037-13497154 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:14249846-14249729 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:14353082-14353199 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:15026706-15026589 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:15084316-15084433 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:17455784-17455901 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:17865034-17864917 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr24:18222757-18222641 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:18234511-18234628 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:18740632-18740515 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:19331324-19331441 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:19406752-19406635 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:19679278-19679395 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:19815678-19815560 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 79

Conread position: 483-601
Cow position: chr24:20220927-20221043 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 483-601
Cow position: chr24:20604485-20604602 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 9

Conread position: 483-601
Cow position: chr24:21211181-21211064 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:22047337-22047220 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:22193132-22193249 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 8

Conread position: 483-601
Cow position: chr24:22795293-22795409 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 9

Conread position: 483-601
Cow position: chr24:26795153-26795270 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:27290283-27290400 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr24:28833125-28833008 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:29097736-29097619 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:29191020-29191137 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 20

Conread position: 483-601
Cow position: chr24:29375745-29375862 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:30484526-30484411 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 483-601
Cow position: chr24:34270925-34271042 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:36105970-36105853 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:36308313-36308430 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:36555422-36555305 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:38296793-38296910 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:40427957-40427838 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:40789858-40789741 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr24:41671589-41671706 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr24:43906595-43906712 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-602
Cow position: chr24:28497417-28497300 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 483-603
Cow position: chr24:9088061-9087941 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 79

Conread position: 484-601
Cow position: chr24:40518875-40518759 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 19

Conread position: 485-601
Cow position: chr24:17406806-17406921 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 76

Conread position: 485-601
Cow position: chr24:39913823-39913938 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 75

Conread position: 485-602
Cow position: chr24:31770217-31770333 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 7

Conread position: 486-595
Cow position: chr24:24137443-24137334 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 76

Conread position: 486-595
Cow position: chr24:35793587-35793696 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 74

Conread position: 486-596
Cow position: chr24:33371967-33372076 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 17

Conread position: 486-601
Cow position: chr24:4649537-4649424 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 6

Conread position: 486-601
Cow position: chr24:8886291-8886405 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 6

Conread position: 486-601
Cow position: chr24:11327083-11327199 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 74

Conread position: 486-601
Cow position: chr24:41063196-41063310 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 72

Conread position: 487-601
Cow position: chr24:15296855-15296969 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 73

Conread position: 487-601
Cow position: chr24:38487999-38488113 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 73

Conread position: 488-601
Cow position: chr24:38588520-38588632 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 10

Conread position: 489-602
Cow position: chr24:6271850-6271966 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 76

Conread position: 492-602
Cow position: chr24:6341576-6341686 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 70

Conread position: 498-601
Cow position: chr24:4616326-4616223 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 64

Conread position: 499-595
Cow position: chr24:40129541-40129637 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 63

Conread position: 501-601
Cow position: chr24:4666834-4666934 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 59

Conread position: 501-601
Cow position: chr24:6019217-6019117 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr24:8331744-8331644 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr24:9901125-9901225 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 59

Conread position: 501-601
Cow position: chr24:13542434-13542334 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 61

Conread position: 501-601
Cow position: chr24:16654251-16654151 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr24:29388611-29388711 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr24:29679883-29679783 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr24:31067301-31067201 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 59

Conread position: 504-601
Cow position: chr24:5910576-5910673 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 56

Conread position: 509-602
Cow position: chr24:17412177-17412270 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 51

Show alignments to all cow chromosomes.